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25 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.

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Topic : Bioinformatics [Filter]
Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]

Registered: 2013-01-21 21:13

1. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.

Development Status : 4 - Beta [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

Activity Percentile: 0.00

Registered: 2010-04-01 17:54

2. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.

Development Status : 2 - Pre-Alpha [Filter]
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Topic : High Performance Computing : Parallel Computing [Filter]

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Registered: 2011-06-10 12:13

3. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.

Development Status : 4 - Beta [Filter]
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Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]

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Registered: 2012-03-28 07:52

4. wtJonckheere - Non-parametric Jonckheere-Terpstra trend test on weighted data

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Registered: 2014-06-20 10:11

5. radR - processing of radar data in R - radR retrieves data from your live radar or recorded archive and analyses it for features, which are saved in replayable files that are much smaller than raw data sets. You can extend radR via plugins.

Development Status : 3 - Alpha [Filter]
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Registered: 2007-11-20 20:30

6. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp

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Registered: 2013-05-29 18:34

7. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.

Development Status : 5 - Production/Stable [Filter]
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Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
Topic : Optimization : Mathematical Programming : Linear Programming [Filter]

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Registered: 2007-11-27 09:48

8. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.

Development Status : 5 - Production/Stable [Filter]
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Topic : Genetics [Filter]

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Registered: 2011-03-23 10:20

9. Protocol for Adjust & Select Models - This project is about modeling species abundances in communities.

Development Status : 1 - Planning [Filter]
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Registered: 2011-01-18 16:54

10. Parallel computations in R - This package uses and extends parallel infrastructure available in R and provides various applications in HPC.

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Registered: 2007-01-28 18:20

11. Estimation and Model Checking for GLSM - This package mainly deals with generalized linear spatial models for estimation, model checking and prediction by using MCMC algorithms.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bayesian Statistics : Specific Model Fitting [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

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Registered: 2011-08-17 10:52

12. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm.

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Topic : Bayesian Statistics [Filter]
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Registered: 2011-01-07 17:53

13. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.

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Topic : Bioinformatics : Visualization [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]
Topic : Machine Learning : Bayesian Methods [Filter]

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Registered: 2009-02-18 09:38

14. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.

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Topic : Cluster Analysis : Model-based Clustering [Filter]

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Registered: 2009-02-18 10:01

15. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.

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Registered: 2010-11-19 22:27

16. X-METRIC Inventory Optimizations - Multi-Echelon Techniques for Recoverable Item Control and its variants MOD-METRIC, VARI-METRIC and related extensions

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Registered: 2013-08-24 22:00

17. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.

Development Status : 4 - Beta [Filter]
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Topic : Computational Physics [Filter]
Topic : Connectivity [Filter]
Topic : High Performance Computing : Large Memory [Filter]

Registered: 2009-06-17 16:54

18. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods

Development Status : 1 - Planning [Filter]
Development Status : 2 - Pre-Alpha [Filter]
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Topic : Environmetrics [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

Registered: 2011-01-24 12:50

19. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows.

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Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
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Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]

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Registered: 2008-08-04 05:27

25 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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