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28 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bioinformatics : Visualization [Filter]
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Topic : Machine Learning : Bayesian Methods [Filter]

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Registered: 2009-02-18 09:38

1. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.

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Topic : Chemoinformatics [Filter]
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Registered: 2010-04-25 17:27

2. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.

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Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

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Registered: 2009-02-18 10:01

3. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.

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Topic : Bayesian Statistics [Filter]
Topic : Multivariate Statistics [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

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Registered: 2011-08-18 03:20

4. Estimation and Model Checking for GLSM - This package mainly deals with generalized linear spatial models for estimation, model checking and prediction by using MCMC algorithms.

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Topic : Bayesian Statistics : Specific Model Fitting [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

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Registered: 2011-08-17 10:52

5. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing

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Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]

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Registered: 2020-03-12 20:57

6. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.

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Registered: 2011-06-10 12:13

7. Extremal Dependence - Extremal Dependence package provides parametric and nonparametric statistical methods for modelling and estimating the dependence of extreme values

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Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

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Registered: 2014-12-02 11:09

8. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.

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Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
Topic : Optimization : Mathematical Programming : Linear Programming [Filter]

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Registered: 2007-11-27 09:48

9. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.

Development Status : 4 - Beta [Filter]
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Topic : Computational Physics [Filter]
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Topic : High Performance Computing : Large Memory [Filter]

Registered: 2009-06-17 16:54

10. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output.

Development Status : 3 - Alpha [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]

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Registered: 2016-02-18 15:57

11. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.

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Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

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Registered: 2010-04-01 17:54

12. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.

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Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]

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Registered: 2012-03-28 07:52

13. vcf2geno: reading VCF made easy - Efficiently Read Variant Call Format (VCF) into R

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Registered: 2012-08-22 01:29

14. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.

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Topic : Genetics [Filter]

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Registered: 2011-03-23 10:20

15. SPRINT: Simple Parallel R INTerface - SPRINT is a Simple Parallel R INTerface to High Performance Computing (HPC) that enables biologists to run statistical analysis scripts using R in parallel on HPC clusters. It consists of an HPC harness and a library of parallelized R functions.

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Registered: 2009-11-20 16:56

16. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp

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Registered: 2013-05-29 18:34

17. wtJonckheere - Non-parametric Jonckheere-Terpstra trend test on weighted data

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Registered: 2014-06-20 10:11

18. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.

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Registered: 2010-11-19 22:27

19. radR - processing of radar data in R - radR retrieves data from your live radar or recorded archive and analyses it for features, which are saved in replayable files that are much smaller than raw data sets. You can extend radR via plugins.

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Registered: 2007-11-20 20:30

28 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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