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72 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. MEET.5.1:Motif Element Estimation Tools - MEET 5.1 is an R-package that includes a set of models, aprox. 550, and tools for the detection of cis-regulatory sequences.
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- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics : Mathematics [Filter]
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Registered: 2011-08-10 14:27 |
1. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class.
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- Development Status : 1 - Planning [Filter]
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2008-07-24 04:32 |
2. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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- Development Status : 4 - Beta [Filter]
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- Natural Language : German [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
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- Topic : Genetics [Filter]
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Registered: 2010-03-05 10:51 |
3. Clustericat - This package performs clustering for categorical data-set by the conditional correlated mixture model. It contains a function clusteringcat() performing the clustering on categorical data-set and returns object of appropriate class.
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- Development Status : 4 - Beta [Filter]
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- Natural Language : French [Filter]
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- Programming Language : C/C\+\+ [Filter]
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- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification : Cluster Analysis [Filter]
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Registered: 2013-12-05 14:22 |
4. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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- Development Status : 4 - Beta [Filter]
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Registered: 2012-07-03 03:50 |
5. arules - Mining Association Rules - Infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules).
arules is now maintained on Github: https://github.com/mhahsler/arules
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- Topic : Machine Learning [Filter]
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Registered: 2007-05-21 13:55 |
6. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
7. Soil water - The project has now moved to GitHub: https://github.com/julienmoeys/soilwater
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Registered: 2010-08-17 21:13 |
8. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis
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Registered: 2014-01-22 14:22 |
9. Classification and Regression Training - The caret packages contain functions for tuning predictive models, pre-processing, variable importance and other tools related to machine learning and pattern recognition. Parallel processing versions of the main package are also included.
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Operating System : OS Independent [Filter]
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- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Regression Models [Filter]
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Registered: 2008-06-05 19:31 |
10. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
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- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Genetics : QTL Mapping [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
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Registered: 2009-10-02 07:07 |
11. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).
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- Development Status : 5 - Production/Stable [Filter]
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- Programming Language : Tcl [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2011-05-10 20:54 |
12. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Development Status : 4 - Beta [Filter]
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- Environment : X11 Applications : Gnome [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Bayesian Statistics [Filter]
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- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
13. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.
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- Development Status : 2 - Pre-Alpha [Filter]
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- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2011-06-10 12:13 |
14. Forecasting with Artificial Intelligence - The package ForAI uses machine learning methods such as artificial neural networks, support vector regression, extreme learning machines, and evolutionary algorithms for forecasting and prediction.
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- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Machine Learning [Filter]
- Topic : Optimization [Filter]
- Topic : Regression Models [Filter]
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Registered: 2012-01-22 07:45 |
15. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2010-01-08 16:59 |
16. mrp - MOVED TO GITHUB: https://github.com/malecki/mrp
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- Development Status : 1 - Planning [Filter]
- Development Status : 4 - Beta [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
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Registered: 2009-09-21 14:11 |
17. Species Distribution Modelling tools - THIS PROJECT HAS MOVED to http://rforge.net/SDMTools/ ... Provided will be a set of tools for processing the outcomes of species distribution models.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2010-02-17 21:58 |
18. sentiment - The sentiment project provides packages to retrieve text corpora from various web sources and analyze its sentiment based on the tm text mining package.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Text : Text Mining [Filter]
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Registered: 2011-03-24 20:11 |
19. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data.
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Registered: 2010-10-20 17:09 |
72 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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