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38 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.
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Registered: 2010-04-01 17:54 |
1. grainscape - Create grains of connectivity and minimum planar graph models to calculate effective distances for landscape connectivity at multiple scales.
**Development of this package has moved to GitHub (https://achubaty.github.io/grainscape).**
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Registered: 2012-03-07 12:18 |
2. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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Registered: 2013-05-29 18:34 |
3. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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Registered: 2012-08-10 08:48 |
4. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.
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Registered: 2010-04-25 17:27 |
5. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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Registered: 2013-11-21 21:46 |
6. readcsvcolumns - This package provides a single R function called read.csv.columns with which you can read a CSV file. You also need to specify beforehand what type each column is (integers, real values or strings) and you can also mark columns to be ignored.
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Registered: 2014-12-31 12:19 |
7. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired.
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Registered: 2014-12-24 12:43 |
8. mrp - MOVED TO GITHUB: https://github.com/malecki/mrp
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Registered: 2009-09-21 14:11 |
9. Analysis of multi-electrode array data - Functions for the analysis of spike-trains recorded using multi-electrode arrays. Tools include simple visualisation, movie generation, burst analysis, network spikes and episode detection.
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Registered: 2012-04-07 09:14 |
10. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.
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Registered: 2014-11-28 09:55 |
11. Distance Weighted Discrimination (DWD) - Distance Weighted Discrimination (DWD) is a machine learning tool similar to SVM but with better breakdown properties as the number of variables increases in relationship to the number of observations.
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- Topic : Machine Learning : Support Vector Machines [Filter]
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Registered: 2011-10-21 13:31 |
12. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects.
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Registered: 2012-05-15 16:23 |
13. Extreme Values in R (evir) - Extreme Value in R: Functions for extreme value theory, which may be divided into the following groups; exploratory data analysis, block maxima, peaks over thresholds (univariate and bivariate), point processes, gev/gpd distributions.
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- Topic : Econometrics : Time Series Modelling [Filter]
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- Topic : Time Series [Filter]
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Registered: 2011-03-21 13:20 |
14. synchrony - Tools for computing spatial, temporal, and spatiotemporal statistics
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Registered: 2012-04-17 15:53 |
15. CShapes Dataset and Utilities - This package provides a link between R and CShapes, a GIS dataset of country boundaries (1946-2008). The package includes functions for data extraction and the computation of weights matrices.
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Registered: 2009-12-15 20:42 |
16. Tools for Uplift Modeling - The R Package tools4uplift integrates some tools for exploring and modeling uplift. The content can be separated into the following steps of statistical modeling: quantization, visualization, model selection and model validation.
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Registered: 2018-08-31 21:23 |
17. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp.
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
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Registered: 2008-03-14 14:49 |
18. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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Registered: 2012-07-03 03:50 |
19. parallelstructure - Package to provide a R framework to make use of multi-core computers when running analysis in the population genetics software STRUCTURE.
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Registered: 2013-03-26 16:28 |
38 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
