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70 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.

Development Status : 4 - Beta [Filter]
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Topic : Environmetrics [Filter]
Topic : Multivariate Statistics : Multivariate Distributions [Filter]
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Registered: 2010-02-08 16:57

1. CNVScope - CNVScope: Visually exploring copy number aberrations in cancer genomes

Development Status : 5 - Production/Stable [Filter]
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Registered: 2019-07-16 15:34

2. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm.

Development Status : 3 - Alpha [Filter]
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Topic : Bayesian Statistics [Filter]
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Topic : Graphical Models [Filter]

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Registered: 2011-01-07 17:53

3. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.

Development Status : 4 - Beta [Filter]
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Topic : Computational Physics [Filter]
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Registered: 2009-06-17 16:54

4. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.

Development Status : 4 - Beta [Filter]
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Registered: 2012-08-10 08:48

5. X-METRIC Inventory Optimizations - Multi-Echelon Techniques for Recoverable Item Control and its variants MOD-METRIC, VARI-METRIC and related extensions

Development Status : 1 - Planning [Filter]
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Topic : Optimization [Filter]

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Registered: 2013-08-24 22:00

6. Plotrix development - Plotrix development and maintenance

Development Status : 5 - Production/Stable [Filter]
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Topic : Graphics : Plotting [Filter]

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Registered: 2012-05-03 10:56

7. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.

Development Status : 5 - Production/Stable [Filter]
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Registered: 2010-11-19 22:27

8. Parallel computations in R - This package uses and extends parallel infrastructure available in R and provides various applications in HPC.

Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2007-01-28 18:20

9. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods

Development Status : 1 - Planning [Filter]
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Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

Registered: 2011-01-24 12:50

10. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data.

Development Status : 5 - Production/Stable [Filter]
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Natural Language : Russian [Filter]
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Registered: 2010-10-20 17:09

11. ParallABEL - ParallABEL aims to speed up the computation of GWA studies and also simplify parallelization in analysis of this important research area. See http://www.sc.psu.ac.th/units/genome/CGBR/ParallABEL/index.html for more details.
Environment : Console (Text Based) [Filter] Intended Audience : End Users/Desktop (Now Filtering) License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : POSIX : Linux (Now Filtering) Programming Language : R (Now Filtering) Topic : Bioinformatics : Statistics [Filter]	Activity Percentile: 0.00 Registered: 2010-04-23 07:05

12. cameratraps - Process and manage camera traps data: images, videos, no database, no fuss. Images and videos are stored on a filesystem, NAS hardware is cheap. The package takes care of cataloguing and carrying out basic analysis. Loosely inspored by Rovero and Zimmerman (2016) https://doi.org/10.1002/jwmg.21293

Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2019-08-08 11:35

13. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.

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Registered: 2013-11-21 21:46

14. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

Activity Percentile: 0.00

Registered: 2009-02-18 10:01

15. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bioinformatics : Visualization [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]
Topic : Machine Learning : Bayesian Methods [Filter]

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Registered: 2009-02-18 09:38

16. Sublogo dendrograms - Sublogo dendrograms are statistical graphics that reveal correlation in biological sequence alignments.

Development Status : 5 - Production/Stable [Filter]
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Registered: 2009-06-19 09:14

17. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series

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Registered: 2008-12-12 11:07

18. Extremal Dependence - Extremal Dependence package provides parametric and nonparametric statistical methods for modelling and estimating the dependence of extreme values

Development Status : 5 - Production/Stable [Filter]
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Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

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Registered: 2014-12-02 11:09

19. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.

Development Status : 5 - Production/Stable [Filter]
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Registered: 2011-03-23 10:20

70 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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