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27 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Regression Models for Ordinal Data - This project hosts the R-package 'ordinal'. The ordinal R-package implements likelihood based models for ordinal (ordered categorical) data based on cumulative probabilities in the framework of cumulative link (mixed) models.
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Registered: 2010-06-12 18:24 |
1. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
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Registered: 2011-10-11 08:51 |
2. Conditional Random Fields - This project provides a set of tools for conditional random fields tasks such as decoding/inference/sampling/training.
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Registered: 2010-12-28 07:13 |
3. Nonparametrics for Clustered Binary Data - CorrBin implements nonparametric methods for analysing exchangeable binary and multinomial data with variable cluster sizes with emphasis on trend testing.
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- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2008-10-02 19:05 |
4. Earth Mover Distance - EarthMovDist implements the Earth Movers distance in R.
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Registered: 2009-02-17 06:53 |
5. Profile Dirichlet Process Mixtures - This package facilitates profile inference for a class of product partition models (PPM). The Dirichlet process mixture is a specific case in this class. These methods search for the maximum posterior (MAP) estimate for the cluster partition in the PPM.
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- Topic : Bayesian Statistics : General Model Fitting [Filter]
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Registered: 2009-04-24 15:56 |
6. waveslim: Wavelet methods for 1/2/3D - Basic wavelet routines for the processing/analysis/inference of time series, images and 3D arrays. The code provided here is based on Percival and Walden (2000); Gencay, Selcuk and Whitcher (2001); Kingsbury (1999); and Selesnick (200?).
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Registered: 2009-02-26 17:20 |
7. gsDesign: Group Sequential Design - Generates group sequential designs using alpha- and beta-spending functions or Wang-Tsiatis (e.g., O'Brien-Fleming and Pocock) boundary families. Many plotting capabilities as well as non-binding futility rules are available. Easily extended.
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Registered: 2008-08-31 13:07 |
8. TikZ Device - A Device for LaTeX-friendly output of R graphics in the PGF/TikZ Format
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Registered: 2009-05-31 23:42 |
9. partykit: Recursive Partytioning Toolkit - Infrastructure for representing, summarizing, and visualizing tree-structured models. It can be used for constructing or reading tree models from different sources (rpart, RWeka, PMML), sharing
functionality for print/plot/predict methods.
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- Topic : Machine Learning : Recursive Partitioning [Filter]
- Topic : Regression Models [Filter]
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Registered: 2008-09-30 11:39 |
10. Hyper-g Priors for GAM selection - This R-package implements objective Bayesian model selection with penalised splines, using a so-called hyper-g prior for the parameters in the generalised additive model.
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Registered: 2011-08-11 09:12 |
11. Gradient forest - Detecting biological composition patterns along environmental gradients from site-by-species ecological data. Package gradientForest calculates the gradients from split-point importances provided by auxiliary package extendedForest, based on randomForest.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-06 08:05 |
12. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis.
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Registered: 2011-09-26 05:04 |
13. Clustering using convex fusion penalties - An R/C++ implementation of the clusterpath algorithm described in Hocking et al. 2011, for robust convex clustering using sparsity-inducing fusion penalties.
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- Programming Language : Python [Filter]
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
- Topic : Optimization [Filter]
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Registered: 2011-05-09 12:56 |
14. adephylo - The package 'adephylo' implements multivariate approaches for comparative data, i.e. data including one phylogeny and one or several traits.
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- Topic : Genetics : Phylogenetics [Filter]
- Topic : Multivariate Statistics : Projection Methods [Filter]
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Registered: 2008-11-18 15:35 |
15. splinesurv - A package containing utilities for nonparametric Bayesian analysis of clustered survival data. The baseline hazard function and frailty density are modeled using penalized B-splines. Regression and spline parameters are estimated via MCMC.
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Registered: 2008-01-08 16:50 |
16. Yasomi: Self-Organising Map in R - Yasomi is Yet Another Self-Organising Map Implementation. It provides an implementation of Kohonen's SOM, with extension to kernel variants and comprehensive visualisation capabilities.
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- Topic : Cluster Analysis [Filter]
- Topic : Machine Learning : Neural Networks [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification [Filter]
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Registered: 2011-02-25 12:40 |
17. Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered.
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Registered: 2009-06-08 12:06 |
18. analogue - quantitative palaeoecology - analogue fits Modern Analogue Technique (MAT) and Weighted Averaging (WA) transfer function models for prediction of environmental data from species data.
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- Topic : Environmetrics [Filter]
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Registered: 2007-09-07 13:38 |
19. simecol - Ecological Models with R - simecol allows to implement ecological models (ODEs, IBMs, ...) using a template-like object-oriented stucture. It helps to organize scenarios and may also be useful for other areas.
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Registered: 2008-02-20 20:34 |
27 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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