Software Map
Project Tree
Now limiting view to projects in the following categories:
       Intended Audience :: End Users/Desktop [Remove This Filter]
       License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
       Operating System :: MacOS [Remove This Filter]
       Programming Language :: R [Remove This Filter]
35 projects in result set. Displaying 20 per page. Projects sorted by activity ranking. 
<1>   
0. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Console (Text Based) [Filter] 
 
- Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : C/C\+\+ [Filter] 
 - Programming Language : R (Now Filtering) 
 
- Topic : Bioinformatics : Medical Science [Filter] 
 - Topic : Genetics [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2011-03-23 10:20 | 
1. Modelling Peaks Over Threshold - The project consists in developing functions for peaks over threshold modeling. Most of results come from the extreme value theory (EVT). The EVT is currently extensively used, mostly in environmental sciences and finance.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Win32 (MS Windows) [Filter] 
 - Environment : X11 Applications [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 - Natural Language : French [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : C/C\+\+ [Filter] 
 - Programming Language : Fortran [Filter] 
 - Programming Language : R (Now Filtering) 
 
- Topic : Finance : Risk Management : Value at Risk [Filter] 
 - Topic : Other/Nonlisted Topic [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2007-09-21 14:29 | 
2. addendum - Utility functions that should have been in R: easy glmnet, pretty graphing and swift debugging and profiling.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Other Environment [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Machine Learning : Model Selection and Validation [Filter] 
 - Topic : Multivariate Statistics : Missing Data [Filter] 
 - Topic : Regression Models [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2011-06-17 13:35 | 
3. R package nlstools - The R package nlstools: a toolbox for nonlinear regression diagnostics   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Regression Models [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2009-02-24 11:54 | 
4. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Console (Text Based) [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : High Performance Computing : Parallel Computing [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2010-11-19 22:28 | 
5. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Bioinformatics [Filter] 
 - Topic : Datasets [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2014-01-22 14:22 | 
6. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class.   | 
- Development Status : 1 - Planning [Filter] 
 - Development Status : 5 - Production/Stable [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 - Intended Audience : System Administrators [Filter] 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Bayesian Statistics : General Model Fitting [Filter] 
 - Topic : Bioinformatics : Statistics [Filter] 
 - Topic : Bioinformatics : Visualization [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2008-07-24 04:32 | 
7. ZooImage - ZooImage is a software (based on R and ImageJ) to analyze plankton samples, using image analysis and machine learning techniques. This is the old repository, please, look at https://github.com/SciViews/zooimage for latest version!   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Other Environment [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : Java [Filter] 
 - Programming Language : R (Now Filtering) 
 
- Topic : Biostatistics & Medical Statistics [Filter] 
 - Topic : Machine Learning [Filter] 
 - Topic : Other/Nonlisted Topic [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2009-02-18 14:57 | 
8. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Console (Text Based) [Filter] 
 
- Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter] 
 - Topic : Time Series [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2011-11-02 22:53 | 
9. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Console (Text Based) [Filter] 
 
- Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 - Natural Language : German [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : C/C\+\+ [Filter] 
 - Programming Language : R (Now Filtering) 
 
- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter] 
 - Topic : Optimization : Mathematical Programming : Integer Programming [Filter] 
 - Topic : Optimization : Mathematical Programming : Linear Programming [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2007-11-27 09:48 | 
10. Nonlinear regression analysis - Data sets from Bates and Watts (1988) "Nonlinear Regression Analysis and Its Applications" plus lattice-based graphics for nonlinear regression models, including parameter inference regions.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Other Environment [Filter] 
 
- Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft [Filter] 
 - Operating System : POSIX [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Datasets [Filter] 
 - Topic : Graphics : Applications [Filter] 
 - Topic : Regression Models [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2007-06-01 15:07 | 
11. Model-Free Psychometric Functions - Local linear estimation of psychometric functions. Provides functions for nonparametric estimation of a psychometric function and for estimation of a derived threshold and slope, and their standard deviations and confidence intervals.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Bioinformatics [Filter] 
 - Topic : Regression Models [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2009-08-22 09:52 | 
12. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Bioinformatics : Statistics [Filter] 
 - Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter] 
 - Topic : Genetics : Population Genetics [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2020-04-25 19:28 | 
13. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Console (Text Based) [Filter] 
 
- Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : C/C\+\+ [Filter] 
 - Programming Language : R (Now Filtering) 
 
- Topic : Bioinformatics : Visualization [Filter] 
 - Topic : Cluster Analysis : Model-based Clustering [Filter] 
 - Topic : Machine Learning : Bayesian Methods [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2009-02-18 09:38 | 
14. TSP - Traveling Salesperson Problem - Basic infrastructure and some algorithms for the traveling salesperson problem (TSP). The package is now maintained on github at http://github.com/mhahsler/TSP   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : C/C\+\+ [Filter] 
 - Programming Language : R (Now Filtering) 
 
- Topic : Optimization : Mathematical Programming : Global Optimization [Filter] 
 
  | 
 Registered: 2007-02-20 12:47 | 
15. arm - R functions for processing lm, glm, mer and polr outputs.   | 
- Development Status : 4 - Beta [Filter] 
 - Development Status : 5 - Production/Stable [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 - Intended Audience : Other Audience [Filter] 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : Other OS [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Bayesian Statistics [Filter] 
 - Topic : Graphics [Filter] 
 - Topic : Regression Models [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2008-04-09 23:40 | 
16. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Console (Text Based) [Filter] 
 - Environment : X11 Applications [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Bioinformatics : Visualization [Filter] 
 - Topic : Genetics [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2010-01-08 16:59 | 
17. rgl: 3D visualization support - rgl development has moved to Github.
rgl is a 3D visualization system based on OpenGL.  It provides a medium to high level interface for use in R, currently modelled on classic R graphics, with extensions to allow for interaction.   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Other Environment [Filter] 
 - Environment : Win32 (MS Windows) [Filter] 
 - Environment : X11 Applications [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : C/C\+\+ [Filter] 
 - Programming Language : R (Now Filtering) 
 
- Topic : Graphics : Dynamic Graphics [Filter] 
 - Topic : Graphics : Graphics Systems [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2008-08-16 13:50 | 
18. cvrcalc - A Cardiovascular Risk's Calculator by Scores   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Environment : Win32 (MS Windows) [Filter] 
 - Environment : X11 Applications [Filter] 
 
- Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : R (Now Filtering) 
 
- Topic : Bioinformatics : Medical Science [Filter] 
 - Topic : Bioinformatics : Statistics [Filter] 
 - Topic : Biostatistics & Medical Statistics [Filter] 
 
  | 
Activity Percentile: 0.00
  Registered: 2013-08-02 12:18 | 
19. arules - Mining Association Rules - Infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules).
arules is now maintained on Github: https://github.com/mhahsler/arules
   | 
- Development Status : 5 - Production/Stable [Filter] 
 
- Intended Audience : Developers [Filter] 
 - Intended Audience : End Users/Desktop (Now Filtering) 
 
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering) 
 
- Natural Language : English [Filter] 
 
- Operating System : MacOS (Now Filtering) 
 - Operating System : Microsoft : Windows [Filter] 
 - Operating System : POSIX : Linux [Filter] 
 
- Programming Language : C/C\+\+ [Filter] 
 - Programming Language : R (Now Filtering) 
 
- Topic : Machine Learning [Filter] 
 
  | 
 Registered: 2007-05-21 13:55 | 
35 projects in result set. Displaying 20 per page. Projects sorted by activity ranking. 
<1>