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37 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Species Distribution Modelling tools - THIS PROJECT HAS MOVED to http://rforge.net/SDMTools/ ... Provided will be a set of tools for processing the outcomes of species distribution models. |
- Development Status : 4 - Beta [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2010-02-17 21:58 |
1. Genotype Database Framework - GT.DB is a database framework for efficiently managing genome-wide genotype datasets (i.e. 10^6 or more biallelic markers, 1000s of samples), as well as underlying raw data and complex phenotype data, tightly integrated with R libraries for analysis. |
- Development Status : 4 - Beta [Filter]
- Environment : Other Environment [Filter]
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- Topic : Bioinformatics [Filter]
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- Topic : Genetics [Filter]
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Registered: 2009-09-17 00:13 |
2. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Bioinformatics [Filter]
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Registered: 2011-09-26 05:04 |
3. lme4 - Mixed-effects models - An R package for fitting and analyzing linear, nonlinear and generalized linear mixed models. |
- Development Status : 4 - Beta [Filter]
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- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2007-08-17 17:27 |
4. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired. |
- Development Status : 4 - Beta [Filter]
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Registered: 2014-12-24 12:43 |
5. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data. |
- Development Status : 4 - Beta [Filter]
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Registered: 2014-11-28 09:55 |
6. R interface to GEOS - The package provides tools for interfacing the C++ translation of the Java Topology Suite (GEOS from JTS). |
- Development Status : 4 - Beta [Filter]
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- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
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Registered: 2009-11-11 10:55 |
7. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp |
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- Natural Language : German [Filter]
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- Topic : High Performance Computing [Filter]
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Registered: 2013-05-29 18:34 |
8. digest - 'hash' arbitrary R objects - The digest package provides functions for the creation of `hash'
digests of arbitrary R objects using the md5, sha-1 and crc32
algorithms permitting easy comparison of R language objects. |
- Development Status : 4 - Beta [Filter]
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Registered: 2008-03-01 16:25 |
9. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy. |
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- Topic : Computational Physics [Filter]
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Registered: 2014-06-28 12:14 |
10. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects. |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Regression Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2012-05-15 16:23 |
11. Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Optimization [Filter]
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Registered: 2009-06-08 12:06 |
12. Rmetrics - Computational Finance - Rmetrics is an open source solution for teaching financial market analysis and valuation of financial instruments. With hundreds of functions build on modern methods, Rmetrics combines explorative data analysis and statistical modelling. |
- Development Status : 4 - Beta [Filter]
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- Topic : Econometrics [Filter]
- Topic : Education [Filter]
- Topic : Finance [Filter]
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Registered: 2008-03-01 16:55 |
13. partykit: Recursive Partytioning Toolkit - Infrastructure for representing, summarizing, and visualizing tree-structured models. It can be used for constructing or reading tree models from different sources (rpart, RWeka, PMML), sharing
functionality for print/plot/predict methods. |
- Development Status : 4 - Beta [Filter]
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- Topic : Machine Learning : Recursive Partitioning [Filter]
- Topic : Regression Models [Filter]
- Topic : Software Development [Filter]
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Registered: 2008-09-30 11:39 |
14. shp2graph - This project provides functions to convert a "spatial" object of a road network to a "graph-class" or "igraph-class" object, which makes "igraph", "graph" and "RBGL" available for analysing it. |
- Development Status : 4 - Beta [Filter]
- Environment : Win32 (MS Windows) [Filter]
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- Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter]
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- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
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Registered: 2011-01-12 17:41 |
15. HaarSeg [MOVED TO GITHUB] - This repository and its package has been moved to <https://github.com/HenrikBengtsson/HaarSeg> |
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2009-06-05 00:29 |
16. Clustering using convex fusion penalties - An R/C++ implementation of the clusterpath algorithm described in Hocking et al. 2011, for robust convex clustering using sparsity-inducing fusion penalties. |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
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- Programming Language : Python [Filter]
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
- Topic : Optimization [Filter]
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Registered: 2011-05-09 12:56 |
17. R2jags - A package for running jags from R |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Bayesian Statistics : Post Estimation Tools [Filter]
- Topic : Bayesian Statistics : R Interfaces [Filter]
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Registered: 2008-05-10 19:19 |
18. expm - Matrix exponential - Efficient calculation of the exponential of a matrix. The package contains an R interface and a C API that package authors can use. |
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- Programming Language : Fortran [Filter]
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- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
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Registered: 2007-12-06 17:43 |
19. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures |
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- Natural Language : French [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2009-04-17 15:10 |
37 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>