Software Map
Project Tree
Now limiting view to projects in the following categories:
Programming Language :: C/C++ [Remove This Filter]
Operating System :: Microsoft :: Windows [Remove This Filter]
License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
46 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.
|
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
|
Registered: 2013-01-21 21:13 |
1. pcplex - This is a test made to source code of the Rcplex package but with some modifications. The objetive is adapt Rcplex's code to a specific aplication in forest planning and regulation using lineal programing and a valid licence of CPLEX.
|
- Development Status : 1 - Planning [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2011-12-23 13:49 |
2. R/GNU Linear Programming Kit Interface - GLPK is an open source software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems. Rglpk provides a high level interface to R for solving LP/MILP problems.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Boolean Programming [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2007-11-27 09:48 |
3. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-23 10:20 |
4. readcsvcolumns - This package provides a single R function called read.csv.columns with which you can read a CSV file. You also need to specify beforehand what type each column is (integers, real values or strings) and you can also mark columns to be ignored.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2014-12-31 12:19 |
5. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Python [Filter]
- Programming Language : R [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2014-12-24 12:43 |
6. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : High Performance Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-19 22:27 |
7. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-18 10:01 |
8. Species Distribution Modelling tools - THIS PROJECT HAS MOVED to http://rforge.net/SDMTools/ ... Provided will be a set of tools for processing the outcomes of species distribution models.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2010-02-17 21:58 |
9. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Nonlinear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2008-03-14 14:49 |
10. Isolation Forest - This package implements an anomaly detection method that detects data-anomalies using binary trees. Using the property that anomalies are more susceptible to isolation, anomalies can be detected as data points which have short expected path lengths.
|
- Development Status : 3 - Alpha [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Machine Learning : Recursive Partitioning [Filter]
|
Activity Percentile: 0.00
Registered: 2009-07-14 06:02 |
11. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2014-11-28 09:55 |
12. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-18 09:38 |
13. Finite Mixure of AFT and FMR models - FMRS package provides estimation and variable selection in Finite Mixture of Accelerated Failure Time Regression (FMAFTR) and Finite Mixture of Regression (FMR) models with a large number of covariates and/or right censoring and heterogeneous structure.
|
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2016-03-07 02:31 |
14. RHmm - Simulations and estimations of discrete, univariate or multivariate gaussian, mixture of univariate or multivariate gaussian hidden Markov models.
|
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2007-10-22 08:05 |
15. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : High Performance Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2013-05-29 18:34 |
16. R2jags - A package for running jags from R
|
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Bayesian Statistics : Post Estimation Tools [Filter]
- Topic : Bayesian Statistics : R Interfaces [Filter]
|
Activity Percentile: 0.00
Registered: 2008-05-10 19:19 |
17. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Computational Physics [Filter]
|
Activity Percentile: 0.00
Registered: 2014-06-28 12:14 |
18. Sparse group lasso [MOVED TO GITHUB] - Algorithms for solving sparse group lasso optimization problems. [MOVED TO GITHUB] https://github.com/vincent-dk
|
- Development Status : 3 - Alpha [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
|
Activity Percentile: 0.00
Registered: 2011-02-28 13:48 |
19. Protocol for Adjust & Select Models - This project is about modeling species abundances in communities.
|
- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows (Now Filtering)
- Operating System : Other OS [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2011-01-18 16:54 |
46 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
