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32 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Rlsf - This package provides functions for using R with the LSF cluster/grid queuing system.

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Registered: 2008-06-25 19:02

1. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.

Development Status : 4 - Beta [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

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Registered: 2010-04-01 17:54

2. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

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Registered: 2009-02-18 10:01

3. SPRINT: Simple Parallel R INTerface - SPRINT is a Simple Parallel R INTerface to High Performance Computing (HPC) that enables biologists to run statistical analysis scripts using R in parallel on HPC clusters. It consists of an HPC harness and a library of parallelized R functions.

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Topic : Bioinformatics : Statistics [Filter]
Topic : High Performance Computing : Parallel Computing [Filter]

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Registered: 2009-11-20 16:56

4. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bioinformatics : Visualization [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]
Topic : Machine Learning : Bayesian Methods [Filter]

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Registered: 2009-02-18 09:38

5. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.

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Topic : Bioinformatics [Filter]
Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]

Registered: 2013-01-21 21:13

6. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.

Development Status : 4 - Beta [Filter]
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Topic : Computational Physics [Filter]
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Topic : High Performance Computing : Large Memory [Filter]

Registered: 2009-06-17 16:54

7. vcf2geno: reading VCF made easy - Efficiently Read Variant Call Format (VCF) into R

Development Status : 4 - Beta [Filter]
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Registered: 2012-08-22 01:29

8. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.

Development Status : 4 - Beta [Filter]
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Natural Language : German [Filter]
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Programming Language : Fortran [Filter]
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Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]

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Registered: 2012-03-28 07:52

9. X-METRIC Inventory Optimizations - Multi-Echelon Techniques for Recoverable Item Control and its variants MOD-METRIC, VARI-METRIC and related extensions

Development Status : 1 - Planning [Filter]
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Topic : Optimization [Filter]

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Registered: 2013-08-24 22:00

10. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods

Development Status : 1 - Planning [Filter]
Development Status : 2 - Pre-Alpha [Filter]
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Topic : Environmetrics [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

Registered: 2011-01-24 12:50

11. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.

Development Status : 5 - Production/Stable [Filter]
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Topic : Bioinformatics : Medical Science [Filter]
Topic : Genetics [Filter]

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Registered: 2011-03-23 10:20

12. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.

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Topic : Bioinformatics : Statistics [Filter]
Topic : Genetics [Filter]

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Registered: 2013-12-19 15:12

13. radR - processing of radar data in R - radR retrieves data from your live radar or recorded archive and analyses it for features, which are saved in replayable files that are much smaller than raw data sets. You can extend radR via plugins.

Development Status : 3 - Alpha [Filter]
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Registered: 2007-11-20 20:30

14. Extremal Dependence - Extremal Dependence package provides parametric and nonparametric statistical methods for modelling and estimating the dependence of extreme values

Development Status : 5 - Production/Stable [Filter]
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Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

Activity Percentile: 0.00

Registered: 2014-12-02 11:09

15. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp

Development Status : 4 - Beta [Filter]
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Topic : Bioinformatics [Filter]
Topic : Genetics [Filter]
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Registered: 2013-05-29 18:34

16. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows.

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Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]

Activity Percentile: 0.00

Registered: 2008-08-04 05:27

17. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.

Development Status : 4 - Beta [Filter]
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Topic : Chemoinformatics [Filter]
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Registered: 2010-04-25 17:27

18. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.

Development Status : 4 - Beta [Filter]
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Topic : Bayesian Statistics [Filter]
Topic : Multivariate Statistics [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

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Registered: 2011-08-18 03:20

19. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.

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Registered: 2010-11-19 22:27

32 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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