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41 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. GADA - GADA is an R package for fast and accurate method for detecting copy number alterations (CNA) from array data.
http://groups.google.com/group/gadaproject
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Registered: 2010-10-09 02:03 |
1. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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Registered: 2013-11-21 21:46 |
2. CENTIPEDE - CENTIPEDE is a probabilistic framework that integrates tissue-specific experimental data such as histone modifications and DNaseI cleavage patterns with genomic information such as gene annotation and evolutionary
conservation.
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Registered: 2010-10-26 14:24 |
3. msap - The package msap provides a easy way to analyse MSAP (Methylation-Sensible Amplified Polymorphism) data in order to asses epigenetic and genetic differences between groups of samples.
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Registered: 2012-06-13 23:35 |
4. IsoGene - Testing for Trend in Dose-Response Microarray Experiments: a Comparison of Testing Procedures, Multiplicity, and Resampling-Based Inference
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Registered: 2007-12-03 15:58 |
5. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
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Registered: 2013-12-19 15:12 |
6. Peirce - Illustrate Peirces criterion for rejection of outliers from a normal distribution.
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Registered: 2012-09-07 07:56 |
7. HaarSeg [MOVED TO GITHUB] - This repository and its package has been moved to <https://github.com/HenrikBengtsson/HaarSeg>
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Registered: 2009-06-05 00:29 |
8. waveTiling - Perform transcriptome analysis from tiling array data by a wavelet-based functional model.
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Registered: 2011-12-05 20:42 |
9. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class.
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Registered: 2008-07-24 04:32 |
10. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator.
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Registered: 2009-07-30 17:27 |
11. modEvA - modEvA is an R package for species distribution model evaluation and analysis.
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Registered: 2014-04-04 11:51 |
12. smoothtest - This package implements a whole series of smooth tests that serve as goodness of fit tests for univariate data against a whole range of distributions. The tests can be performed both parametric and data driven.
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Registered: 2011-11-29 13:02 |
13. Layered and chained mixture models - Layered and chained mixture models for various univariate and multivariate distributions.
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- Topic : Multivariate Statistics : Unsupervised Classification [Filter]
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Registered: 2011-05-10 07:45 |
14. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.
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Registered: 2009-02-18 10:01 |
15. GenABEL - A suite of packages for statistical genomics
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Registered: 2009-08-12 17:07 |
16. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation.
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Registered: 2010-03-21 02:01 |
17. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.
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Registered: 2010-04-01 17:54 |
18. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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Registered: 2010-03-05 10:51 |
19. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis.
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Registered: 2020-04-25 19:28 |
41 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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