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40 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
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- Programming Language : R [Filter]
- Topic : Genetics : QTL Mapping [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
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Registered: 2009-10-02 07:07 |
1. RHRV - Package for carrying out heart rate variability studies of ECG records
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- Development Status : 6 - Mature [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Bioinformatics [Filter]
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Registered: 2010-10-14 10:22 |
2. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class.
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- Development Status : 1 - Planning [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
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- Programming Language : R [Filter]
- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2008-07-24 04:32 |
3. lme4 - Mixed-effects models - An R package for fitting and analyzing linear, nonlinear and generalized linear mixed models.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2007-08-17 17:27 |
4. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired.
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- Development Status : 4 - Beta [Filter]
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- Programming Language : Python [Filter]
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- Topic : Software Development [Filter]
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Registered: 2014-12-24 12:43 |
5. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.
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- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Bioinformatics [Filter]
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Registered: 2014-11-28 09:55 |
6. dcGOR - dcGOR is a package for analysing domain-centric ontologies and annotations. It includes: enrichment analysis and visualisation; construction of a domain (semantic similarity) network; significance analysis for a contact network.
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- Development Status : 6 - Mature [Filter]
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Registered: 2014-10-23 15:21 |
7. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages.
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- Development Status : 4 - Beta [Filter]
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- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2014-09-23 08:50 |
8. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Natural Language : German [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : High Performance Computing [Filter]
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Registered: 2013-05-29 18:34 |
9. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy.
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- Development Status : 4 - Beta [Filter]
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- Programming Language : Fortran [Filter]
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- Topic : Computational Physics [Filter]
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Registered: 2014-06-28 12:14 |
10. FNTD - Routines to analyze images from Al2O3:C,Mg-based fluorescent nuclear track detectors in ion-beam research. As from 9/17(15, the development has moved to github (https://github.com/FNTD) & R-forge is updated with (relatively) stable versions.
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- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
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- Programming Language : Java [Filter]
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- Topic : Computational Physics [Filter]
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Registered: 2014-07-04 07:57 |
11. yags: modular GEE solver - yags is a modular solver for generalized estimating equations.
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- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2009-01-04 12:17 |
12. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Regression Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2012-05-15 16:23 |
13. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Datasets [Filter]
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Registered: 2014-01-22 14:22 |
14. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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- Development Status : 4 - Beta [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2012-07-03 03:50 |
15. Animal - The Animal package is intended as tool for analyzing time coded behavioral observation and other ethological data. The project aims to promote the use of R in the the animal sciences and to provide easy to use functions for the researches in the field.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Finance : Data and Date Management [Filter]
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Registered: 2009-03-25 08:04 |
16. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).
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- Development Status : 5 - Production/Stable [Filter]
- Environment : Other Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- License : Public Domain [Filter]
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- Natural Language : Spanish [Filter]
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- Programming Language : R [Filter]
- Programming Language : Tcl [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2011-05-10 20:54 |
17. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Development Status : 3 - Alpha [Filter]
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-04-26 02:20 |
18. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
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- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2010-01-08 16:59 |
19. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2020-04-25 19:28 |
40 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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