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10 projects in result set.
0. msap - The package msap provides a easy way to analyse MSAP (Methylation-Sensible Amplified Polymorphism) data in order to asses epigenetic and genetic differences between groups of samples.
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- Development Status : 5 - Production/Stable [Filter]
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Registered: 2012-06-13 23:35 |
1. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis.
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2020-04-25 19:28 |
2. The adegenet package - The package adegenet is devoted to the multivariate analysis of genetic markers data.
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- Development Status : 4 - Beta [Filter]
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- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics [Filter]
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Registered: 2008-01-06 17:38 |
3. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl
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- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-06-14 14:51 |
4. Individual-based metapopulation model - This package provides functions to run an individual-based metapopulation model, which includes genetic dynamics of diploid individuals, and flexibly defined life-histories.
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- Development Status : 3 - Alpha [Filter]
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Registered: 2012-07-18 10:30 |
5. AFLP - A package for the normalisation on classification of AFLP (Amplification Fragment Length Polymorphism) data.
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- Development Status : 4 - Beta [Filter]
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Registered: 2011-03-02 11:24 |
6. parallelstructure - Package to provide a R framework to make use of multi-core computers when running analysis in the population genetics software STRUCTURE.
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- Development Status : 4 - Beta [Filter]
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- Topic : Genetics : Population Genetics (Now Filtering)
- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2013-03-26 16:28 |
7. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures
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- Development Status : 4 - Beta [Filter]
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Registered: 2009-04-17 15:10 |
8. OriGen - This package implements methods for spatial ancestry described in the paper "Fast Spatial Ancestry via Flexible Allele Frequency Surfaces" published in Bioinformatics 2014.
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- Programming Language : Fortran [Filter]
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Registered: 2014-08-26 19:51 |
9. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator.
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- Development Status : 4 - Beta [Filter]
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- Operating System : POSIX : Linux [Filter]
- Programming Language : Fortran [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Population Genetics (Now Filtering)
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Registered: 2009-07-30 17:27 |
