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48 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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Registered: 2012-07-03 03:50 |
1. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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Registered: 2009-10-07 19:54 |
2. factorplot - factorplot provides numerical and graphical summaries of factor-level differences in GLMs. It produces all pairwise hypotheses tests with either the exact pairwise difference and variance or user-supplied quasi-variances or floating absolute risks.
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Registered: 2011-05-30 16:43 |
3. Species Distribution Modelling tools - THIS PROJECT HAS MOVED to http://rforge.net/SDMTools/ ... Provided will be a set of tools for processing the outcomes of species distribution models.
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Registered: 2010-02-17 21:58 |
4. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978).
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Registered: 2015-07-04 09:37 |
5. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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Registered: 2013-11-21 21:46 |
6. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.
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Registered: 2010-02-08 16:57 |
7. cran2deb - debianize CRAN - cran2deb automatically converts CRAN packages for R into Debian packages, handling dependency matching and package updates nicely.
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Registered: 2008-09-11 19:33 |
8. Dave Armstrong's Misc Functions - Package contains functions to aid in the presentation and interpretation of GLMs and related models. These include utilities to help deal with present interactions in linear and logit/probit models, first differences in predicted probabilities, etc...
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Registered: 2012-05-07 16:37 |
9. Variant Pattern Analyzer - VPA (Variant Pattern Analyzer) is an R package for prioritizing variants with user-specified frequency pattern from multiple study subjects in next generation sequencing study.
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Registered: 2011-08-05 14:30 |
10. RInside - R inside C++ - RInside provides simple C++ classes that make it easy to embed R into your C++ applications.
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Registered: 2009-02-08 22:38 |
11. greenbrown - greenbrown is a collection of functions to analyse trends, trend changes and phenology in gridded time series like from satellite observations or climate model simulations.
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Registered: 2013-02-27 17:37 |
12. Physical activity with accelerometers - The package pawacc collects functions to read, process and store accelerometer files. Models supported: Actigraph GT1M, GT3X and ActiSleep.
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Registered: 2012-09-03 15:45 |
13. Peirce - Illustrate Peirces criterion for rejection of outliers from a normal distribution.
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Registered: 2012-09-07 07:56 |
14. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
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Registered: 2011-06-23 07:05 |
15. Animal - The Animal package is intended as tool for analyzing time coded behavioral observation and other ethological data. The project aims to promote the use of R in the the animal sciences and to provide easy to use functions for the researches in the field.
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Registered: 2009-03-25 08:04 |
16. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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Registered: 2012-08-10 08:48 |
17. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
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Registered: 2009-10-02 07:07 |
18. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes.
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Registered: 2011-07-13 13:38 |
19. crop - The package crop provides an interface to system tools (on Unix-like operating systems) to crop graphics.
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Registered: 2015-10-18 18:40 |
48 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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