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39 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. IsoGene - Testing for Trend in Dose-Response Microarray Experiments: a Comparison of Testing Procedures, Multiplicity, and Resampling-Based Inference
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop (Now Filtering) License : OSI Approved : GNU General Public License (GPL) (Now Filtering) Natural Language : English [Filter] Operating System : Microsoft : Windows [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering)	Activity Percentile: 0.00 Registered: 2007-12-03 15:58

1. waveTiling - Perform transcriptome analysis from tiling array data by a wavelet-based functional model.
Development Status : 3 - Alpha [Filter] Intended Audience : End Users/Desktop (Now Filtering) License : OSI Approved : GNU General Public License (GPL) (Now Filtering) Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering)	Activity Percentile: 0.00 Registered: 2011-12-05 20:42

2. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class.

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Topic : Bayesian Statistics : General Model Fitting [Filter]
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Registered: 2008-07-24 04:32

3. modEvA - modEvA is an R package for species distribution model evaluation and analysis.

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Registered: 2014-04-04 11:51

4. smoothtest - This package implements a whole series of smooth tests that serve as goodness of fit tests for univariate data against a whole range of distributions. The tests can be performed both parametric and data driven.

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Registered: 2011-11-29 13:02

5. msap - The package msap provides a easy way to analyse MSAP (Methylation-Sensible Amplified Polymorphism) data in order to asses epigenetic and genetic differences between groups of samples.

Development Status : 5 - Production/Stable [Filter]
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Registered: 2012-06-13 23:35

6. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes.

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Registered: 2011-06-10 12:24

7. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures

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Registered: 2009-04-17 15:10

8. therese - The purpose of this package is to propose a method for inferring networks from expression data obtained in various experimental condition. The "cLasso" (consensus Lasso) method is implemented.
Development Status : 3 - Alpha [Filter] Intended Audience : End Users/Desktop (Now Filtering) License : OSI Approved : GNU General Public License (GPL) (Now Filtering) Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering) Topic : Regression Models [Filter]	Activity Percentile: 0.00 Registered: 2013-07-05 08:44

9. survGenesInterim - Simulation of survival studies based on simulated gene expression level and patient data. Includes functions to generate such data. Resulting error and power rate can be visualized. Can be used for sample size or power estimation when planning a study.

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Registered: 2011-04-19 11:00

10. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.

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Registered: 2012-07-03 03:50

11. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.

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Registered: 2009-10-07 19:54

12. cvrcalc - A Cardiovascular Risk's Calculator by Scores

Development Status : 5 - Production/Stable [Filter]
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Registered: 2013-08-02 12:18

13. GADA - GADA is an R package for fast and accurate method for detecting copy number alterations (CNA) from array data. http://groups.google.com/group/gadaproject
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop (Now Filtering) License : OSI Approved : GNU General Public License (GPL) (Now Filtering) Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering)	Activity Percentile: 0.00 Registered: 2010-10-09 02:03

14. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares.

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Registered: 2012-07-12 22:01

15. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.

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Registered: 2013-11-21 21:46

16. CENTIPEDE - CENTIPEDE is a probabilistic framework that integrates tissue-specific experimental data such as histone modifications and DNaseI cleavage patterns with genomic information such as gene annotation and evolutionary conservation.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop (Now Filtering) License : OSI Approved : GNU General Public License (GPL) (Now Filtering) Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering)	Activity Percentile: 0.00 Registered: 2010-10-26 14:24

17. Layered and chained mixture models - Layered and chained mixture models for various univariate and multivariate distributions.

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Registered: 2011-05-10 07:45

18. ParallABEL - ParallABEL aims to speed up the computation of GWA studies and also simplify parallelization in analysis of this important research area. See http://www.sc.psu.ac.th/units/genome/CGBR/ParallABEL/index.html for more details.
Environment : Console (Text Based) [Filter] Intended Audience : End Users/Desktop (Now Filtering) License : OSI Approved : GNU General Public License (GPL) (Now Filtering) Natural Language : English [Filter] Operating System : POSIX : Linux [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics (Now Filtering)	Activity Percentile: 0.00 Registered: 2010-04-23 07:05

19. Quasi-likelihood parameter estimation - The package provides methods for parameter estimation for statistical models that can be simulated. We follow a quasi-likelihood approach to estimate the unknown parameter by the root of the so-called quasi-score estimating function.

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Registered: 2017-08-30 21:22

39 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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