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0. coin: Conditional Inference Procedures - Conditional inference procedures for the general independence
problem including two-sample, K-sample (non-parametric ANOVA), correlation,
censored, ordered and multivariate problems.
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Activity Percentile: 91.67
Registered: 2012-01-26 14:41 |
1. Matrix Methods and Classes - R package Matrix provides a hierarchy of matrix classes, both dense & sparse. Numerous methods & operations on these matrices using BLAS & Lapack; further CHOLMOD and other libraries from the SuiteSparse collection.
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- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
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Activity Percentile: 83.33
Registered: 2007-08-17 17:30 |
2. surveillance - The R package 'surveillance' implements statistical methods for the modeling and monitoring of time series of counts, proportions and categorical data, as well as for the modeling of continuous-time point processes of epidemic phenomena.
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- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
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Activity Percentile: 33.33
Registered: 2007-06-19 14:46 |
3. triangle - Provides the standard distribution functions for the triangle distribution
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Registered: 2012-07-13 15:29 |
4. logitnorm - Density, distribution, quantile and random generation function for the logitnormal distribution. Estimation of the mode and the first two moments. Estimation of distribution parameters. - Moved to https://github.com/bgctw/logitnorm
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- Topic : Bayesian Statistics : General Model Fitting [Filter]
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Registered: 2010-09-15 16:07 |
5. IPMpack - IPMpack uses demographic vital rate data and (optionally) environmental data to build integral projection models. The package includes diagnostic routines, provides classic matrix model output, and produces post-hoc metrics (e.g., life expectancy).
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Registered: 2011-12-10 16:04 |
6. deSolve: Differential Equation Solvers - deSolve is a collection of solvers, mostly from the 'lsode' family of solvers. deSolve provides R interfaces to solvers for stiff and non-stiff systems, and can take system descriptions in R, or as defined in dynamically loaded compiled code.
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- Topic : Numerical Analysis : Numerical Problems in Dynamical Systems [Filter]
- Topic : Numerical Analysis : Ordinary Differential Equations [Filter]
- Topic : Numerical Analysis : Partial Differential Equations [Filter]
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Registered: 2008-03-26 19:38 |
7. OOMPA - OOMPA is a suite of R packages for the analysis of gene expression (RNA), proteomics profiling , and other high throughput molecular biology data. OOMPA uses S4 classes to construct object-oriented tools with a consistent user interface.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2013-08-29 17:48 |
8. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.
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Registered: 2011-03-23 10:20 |
9. Circular Statistics - This is the circular package build over the R port of the CircStats package by Ulric Lund from 'Topics in circular Statistics' (2001) S. Rao Jammalamadaka and A. SenGupta, World Scientific.
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Registered: 2007-11-06 22:41 |
10. NameNeedle - Using Needleman-Wunsch to Match Sample Names
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Registered: 2014-02-03 16:21 |
11. UMPIRE - UMPIRE provides tools to simulate realistic biological expression data. It includes additive and multiplicative noise, correlated expression, inactive genes, and a link to outcome data that incorporates the multi-hit cancer model.
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Registered: 2014-02-03 16:37 |
12. caper - Comparative Analysis package - The Comparative Analyses of Phylogenetics and Evolution in R (caper) package implements a range of methods for the comparative analysis of taxa including methods based on phylogenetic independent contrasts and phylogenetically corrected linear models.
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-01-14 11:43 |
13. Class Prediction - A suite of packages that can bu used for "class prediction" problems. Includes tools to standardize training-testing regimens and cross-validation schemes.
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Activity Percentile: 0.00
Registered: 2014-02-03 16:15 |
14. Rcpp - Seamless R and C++ Integration - The Rcpp package provides a C++ library which facilitates the integration of R and C++. R data types (SEXP) are matched to C++ objects in a class hierarchy. All R types are supported and each type is mapped to a dedicated class.
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Registered: 2008-03-01 16:33 |
15. dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Activity Percentile: 0.00
Registered: 2009-08-17 16:25 |
16. Reliability - The project focuses on an Relibility package for GNU R, which allows to estimate software reliability metrics like failure rate or hazard rate.
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Registered: 2007-10-15 15:55 |
17. Gene set analysis with asymptotic pvalue - mGSZ is a gene set analysis method based on GSZ statistics (Törönen et al.,2009) and asymptotic p-value. mGSZ is different from the standard GSZ method in that it assigns asymptotic p-values to the gene set scores instead of empirical p-values.
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Registered: 2014-02-14 10:16 |
18. afex - Analysis of Factorial Experiments - This project has the goal to provide convenience functions for analyzing factorial experiments, namely provide convenience tools for ANOVA and ANCOVA analyses with type 2 and type 3 sums of squares for classical ANOVA and lmer().
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Registered: 2012-07-26 13:10 |
19. msm: Multi-state models - The "msm" package for continuous-time multi-state models for panel data.
From 10 Oct 2016, development moved to https://github.com/chjackson/msm. The final r-forge release is CRAN version 1.6.4.
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Registered: 2013-02-04 15:43 |
253 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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