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42 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. DICOM: Import DICOM data via R - The DICOM package is a small collection of R functions to import binary data files (e.g., MRI, CT, PET, etc.) that conform to the DICOM Data Standard. |
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Registered: 2009-05-29 21:29 |
1. trip -- animal tracking data - The development of trip package is now hosted on GitHub,
https://github.com/mdsumner/trip
MDSumner 2013-07-04
Location estimation, track and spatial analysis for animal tag data. |
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- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
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Registered: 2010-06-24 02:07 |
2. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD. |
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- Topic : Computational Physics [Filter]
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Registered: 2009-06-17 16:54 |
3. Mutoss - Mutoss (multiple hypotheses testing in an open software system) aims at providing a unified, extensible interface covering a large spectrum of multiple hypotheses testing procedures in R. Features a GUI and a simulation tool. Funded by PASCAL2. |
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Registered: 2010-02-11 12:32 |
4. linprog: Linear Programming/Optimization - This package can be used to solve Linear Programming / Linear optimization problems by using the simplex algorithm. |
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- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2009-12-25 16:29 |
5. delftfews - delftfews is a timeseries library extending zoo. it aims at offering a usable base of functions for handling sets of time series in a water management framework. |
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Registered: 2010-05-11 12:39 |
6. RpepXML - R pepXML is an R interface to the pepXML standard for MSMS data identification. It allows pepXML files to be imported into R and for easy manipulation and filtering. |
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Registered: 2010-09-03 21:34 |
7. partykit: Recursive Partytioning Toolkit - Infrastructure for representing, summarizing, and visualizing tree-structured models. It can be used for constructing or reading tree models from different sources (rpart, RWeka, PMML), sharing
functionality for print/plot/predict methods. |
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- Topic : Machine Learning : Recursive Partitioning [Filter]
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Registered: 2008-09-30 11:39 |
8. frontier: Stochastic Frontier Analysis - Maximum Likelihood Estimation of Stochastic Frontier Production and Cost Functions. Two specifications are available: the error components model (Battese and Coelli, 1992) and the efficiency effects model (Battese and Coelli, 1995). |
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- Programming Language : Fortran [Filter]
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- Topic : Econometrics : Further Regression Models [Filter]
- Topic : Econometrics : Microeconometrics [Filter]
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Registered: 2008-10-19 20:27 |
9. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps. |
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-06-23 07:05 |
10. Easy database interface - Simple database interface for SQLite, MySQL and MS Access. It provides functions for easily reading, writing, listing and subsetting tables in SQLite, MySQL and MS Access. easydb is build on top of RSQLite and RODBC. |
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Registered: 2011-08-19 09:26 |
11. simsalabim - This package currently implements Singular System/Spectrum Analysis (SSA) and Phase Synchronisation Indices. |
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- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
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Registered: 2008-10-03 08:07 |
12. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking. |
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Registered: 2011-08-18 03:20 |
13. Direct labels for plots - Simple, uniform framework for adding direct labels to lattice or ggplot2 plots. |
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Registered: 2009-07-17 12:58 |
14. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations |
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Registered: 2011-02-02 00:51 |
15. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis. |
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Registered: 2011-09-26 05:04 |
16. Species Distribution Modelling - sdm is an extendable framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time. |
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Registered: 2014-05-26 16:09 |
17. splinesurv - A package containing utilities for nonparametric Bayesian analysis of clustered survival data. The baseline hazard function and frailty density are modeled using penalized B-splines. Regression and spline parameters are estimated via MCMC. |
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Registered: 2008-01-08 16:50 |
18. blupsurv - Tools for fitting proportional hazards models to clustered
recurrent events data. Nested frailties are modeled by their
best linear unbiased predictors under an auxiliary Poisson model.
Univariate and bivariate recurrent events processes are permitted. |
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Registered: 2008-06-14 13:52 |
19. aroma.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/ |
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Registered: 2009-05-19 20:01 |
42 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>