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49 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. lme4 - Mixed-effects models - An R package for fitting and analyzing linear, nonlinear and generalized linear mixed models. |
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Registered: 2007-08-17 17:27 |
1. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages. |
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Registered: 2014-09-23 08:50 |
2. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. |
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Registered: 2013-11-21 21:46 |
3. CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM. |
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- Topic : Econometrics : Linear Regression Models [Filter]
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Registered: 2013-11-14 14:32 |
4. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp |
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Registered: 2013-05-29 18:34 |
5. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy. |
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Registered: 2014-06-28 12:14 |
6. h5R An interface to hdf5 files from R - This project aims to provide a simple read/write interface to HDF 5 files. |
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Registered: 2010-04-09 23:53 |
7. general multiple-table data management - Our objective is to develop classes of objects that (1) make handling multiple-table data sets easier and (2) seamlessly integrate with existing R plotting and model-fitting functions; our philosophy is to keep data management and data analysis separate. |
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- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data : Data Preprocessing [Filter]
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Registered: 2011-07-27 02:07 |
8. Grid-based symbols - Grid-based matplots, boxplots, barplots, stars and symbols for visualization in arbitrary context like maps or cluster solutions. |
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- Topic : Graphics : Graphics Systems [Filter]
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Registered: 2010-01-11 10:17 |
9. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes. |
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-07-13 13:38 |
10. factorplot - factorplot provides numerical and graphical summaries of factor-level differences in GLMs. It produces all pairwise hypotheses tests with either the exact pairwise difference and variance or user-supplied quasi-variances or floating absolute risks. |
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Registered: 2011-05-30 16:43 |
11. Tools for Uplift Modeling - The R Package tools4uplift integrates some tools for exploring and modeling uplift. The content can be separated into the following steps of statistical modeling: quantization, visualization, model selection and model validation. |
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- Topic : Machine Learning : Model Selection and Validation [Filter]
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Registered: 2018-08-31 21:23 |
12. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. |
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
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Registered: 2010-04-01 17:54 |
13. Animal - The Animal package is intended as tool for analyzing time coded behavioral observation and other ethological data. The project aims to promote the use of R in the the animal sciences and to provide easy to use functions for the researches in the field. |
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Registered: 2009-03-25 08:04 |
14. Variant Pattern Analyzer - VPA (Variant Pattern Analyzer) is an R package for prioritizing variants with user-specified frequency pattern from multiple study subjects in next generation sequencing study. |
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Registered: 2011-08-05 14:30 |
15. Harmony - This package is a natural language processing (NLP) library that allows users to access large language models and use them to compare datasets where variable names are in unstructured text form. The target users are often academic researchers in the social sciences, such as psychology/mental health. We are actively recruiting contributors. We have an existing Python library also.
The source code is at: https://github.com/harmonydata/harmony_r
The web front-end of the tool is at: https://harmonydata.ac.uk/
What does Harmony do?
* Psychologists and social scientists often have to match items in different questionnaires, such as "I often feel anxious" and "Feeling nervous, anxious or afraid".
* This is called harmonisation.
* Harmonisation is a time consuming and subjective process.
* Going through long PDFs of questionnaires and putting the questions into Excel is no fun.
* Enter Harmony, a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items, even in different languages. |
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Registered: 2025-02-13 10:40 |
16. grainscape - Create grains of connectivity and minimum planar graph models to calculate effective distances for landscape connectivity at multiple scales.
**Development of this package has moved to GitHub (https://achubaty.github.io/grainscape).** |
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Registered: 2012-03-07 12:18 |
17. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking. |
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Registered: 2011-08-18 03:20 |
18. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided. |
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Registered: 2010-04-25 17:27 |
19. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs. |
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Registered: 2009-10-07 19:54 |
49 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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