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48 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series
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Registered: 2008-12-12 11:07 |
1. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
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Registered: 2010-04-01 17:54 |
2. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.
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Registered: 2012-08-10 08:48 |
3. umx: A helper library for SEM in OpenMx - umx provides functions making it easy to build, run, modify, and report the results of Structural Equation Models (SEM) using OpenMx. Examples include setting start values: umxStart(); labels: umxLabel(); and reporting; umxSummary().
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Registered: 2013-08-28 13:52 |
4. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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Registered: 2013-11-21 21:46 |
5. CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM.
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- Topic : Econometrics : Linear Regression Models [Filter]
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Registered: 2013-11-14 14:32 |
6. h5R An interface to hdf5 files from R - This project aims to provide a simple read/write interface to HDF 5 files.
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Registered: 2010-04-09 23:53 |
7. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects.
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Registered: 2012-05-15 16:23 |
8. grainscape - Create grains of connectivity and minimum planar graph models to calculate effective distances for landscape connectivity at multiple scales.
**Development of this package has moved to GitHub (https://achubaty.github.io/grainscape).**
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Registered: 2012-03-07 12:18 |
9. CShapes Dataset and Utilities - This package provides a link between R and CShapes, a GIS dataset of country boundaries (1946-2008). The package includes functions for data extraction and the computation of weights matrices.
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Registered: 2009-12-15 20:42 |
10. Grid-based symbols - Grid-based matplots, boxplots, barplots, stars and symbols for visualization in arbitrary context like maps or cluster solutions.
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Registered: 2010-01-11 10:17 |
11. Harmony - This package is a natural language processing (NLP) library that allows users to access large language models and use them to compare datasets where variable names are in unstructured text form. The target users are often academic researchers in the social sciences, such as psychology/mental health. We are actively recruiting contributors. We have an existing Python library also.
The source code is at: https://github.com/harmonydata/harmony_r
The web front-end of the tool is at: https://harmonydata.ac.uk/
What does Harmony do?
* Psychologists and social scientists often have to match items in different questionnaires, such as "I often feel anxious" and "Feeling nervous, anxious or afraid".
* This is called harmonisation.
* Harmonisation is a time consuming and subjective process.
* Going through long PDFs of questionnaires and putting the questions into Excel is no fun.
* Enter Harmony, a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items, even in different languages.
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Registered: 2025-02-13 10:40 |
12. Tools for Uplift Modeling - The R Package tools4uplift integrates some tools for exploring and modeling uplift. The content can be separated into the following steps of statistical modeling: quantization, visualization, model selection and model validation.
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Registered: 2018-08-31 21:23 |
13. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
14. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy.
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Registered: 2014-06-28 12:14 |
15. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
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- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
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Registered: 2009-10-02 07:07 |
16. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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Registered: 2013-05-29 18:34 |
17. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp.
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
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Registered: 2008-03-14 14:49 |
18. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages.
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Registered: 2014-09-23 08:50 |
19. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.
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Registered: 2014-11-28 09:55 |
48 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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