Software Map
Project Tree
Now limiting view to projects in the following categories:
Development Status :: 4 - Beta [Remove This Filter]
Operating System :: MacOS [Remove This Filter]
Operating System :: POSIX :: Linux [Remove This Filter]
Programming Language :: R [Remove This Filter]
42 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. Variant Pattern Analyzer - VPA (Variant Pattern Analyzer) is an R package for prioritizing variants with user-specified frequency pattern from multiple study subjects in next generation sequencing study.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-08-05 14:30 |
1. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
|
Activity Percentile: 0.00
Registered: 2020-03-12 20:57 |
2. Distance Weighted Discrimination (DWD) - Distance Weighted Discrimination (DWD) is a machine learning tool similar to SVM but with better breakdown properties as the number of variables increases in relationship to the number of observations.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Machine Learning : Support Vector Machines [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-21 13:31 |
3. grainscape - Create grains of connectivity and minimum planar graph models to calculate effective distances for landscape connectivity at multiple scales.
**Development of this package has moved to GitHub (https://achubaty.github.io/grainscape).**
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Registered: 2012-03-07 12:18 |
4. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2014-11-28 09:55 |
5. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Regression Models [Filter]
- Topic : Robust Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2012-05-15 16:23 |
6. synchrony - Tools for computing spatial, temporal, and spatiotemporal statistics
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2012-04-17 15:53 |
7. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : Other Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Chemoinformatics [Filter]
- Topic : Graphical Models [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-04-25 17:27 |
8. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
|
Activity Percentile: 0.00
Registered: 2010-04-01 17:54 |
9. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Genetics : Phylogenetics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2011-07-13 13:38 |
10. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978).
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : Spanish [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2015-07-04 09:37 |
11. h5R An interface to hdf5 files from R - This project aims to provide a simple read/write interface to HDF 5 files.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Connectivity [Filter]
- Topic : High Performance Computing [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2010-04-09 23:53 |
12. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Python [Filter]
- Programming Language : R (Now Filtering)
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2014-12-24 12:43 |
13. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Nonlinear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2008-03-14 14:49 |
14. parallelstructure - Package to provide a R framework to make use of multi-core computers when running analysis in the population genetics software STRUCTURE.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Genetics : Population Genetics [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2013-03-26 16:28 |
15. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2008-12-12 11:07 |
16. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
|
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : High Performance Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2013-05-29 18:34 |
17. factorplot - factorplot provides numerical and graphical summaries of factor-level differences in GLMs. It produces all pairwise hypotheses tests with either the exact pairwise difference and variance or user-supplied quasi-variances or floating absolute risks.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Graphics [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-05-30 16:43 |
18. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2014-09-23 08:50 |
19. greenbrown - greenbrown is a collection of functions to analyse trends, trend changes and phenology in gridded time series like from satellite observations or climate model simulations.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2013-02-27 17:37 |
42 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
