Software Map

Tag cloud | Project Tree | Project List


ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Rcmdr Regression SNP Statistics Time series Visualization Whole-genome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models linear programming machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics non-parametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting political analysis prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatio-temporal species distribution models survival teaching text mining time series visualization

19 projects in result set.
DCchoice for contingent valuation method - This projects maintains the R package DCchoice for conducting analyses with contingent valuation method (CVM). The package provides functions for parametric and nonparametric estimation of consumers' willingness-to-pays (WTPs) for non-marketed goods.
Tags: Economics, agriculture, econometrics, non-parametrics, nonparametric, parametric model, survival
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-08-08 01:26

Disease progression models - Methods for fitting multistate disease process models
Tags: biostatistics, longitudinal data, multi-state models, panel data analysis, survival
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-05-31 18:33

Finite Mixure of AFT and FMR models - FMRS package provides estimation and variable selection in Finite Mixture of Accelerated Failure Time Regression (FMAFTR) and Finite Mixture of Regression (FMR) models with a large number of covariates and/or right censoring and heterogeneous structure.
Tags: Bioinformatics, Biostatistics, C++, Cancer, Medical Science, Mixture, Next generation Sequencing, R, Regression, Statistics, lasso, model estimation, model selection, penalized regression, regularization, survival, tuning parameters, variable selection

Activity Percentile: 0
Activity Ranking: 0
Registered: 2016-03-07 02:31

IPMpack - IPMpack uses demographic vital rate data and (optionally) environmental data to build integral projection models. The package includes diagnostic routines, provides classic matrix model output, and produces post-hoc metrics (e.g., life expectancy).
Tags: R, R-Forge, animal, biostatistics, comparative analysis, ecology, longitudinal data, model comparison, model estimation, projections, survival, time series, trajectory

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-10 16:04

Joint Modeling in R - Joint models for longitudinal and time-to-event (survival) data in R using package JM.
Tags: competing risks models, mixed model, multivariate, survival
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-14 08:19

Misc Biostats Tools from EBPI@UZH - Miscellaneous tools for biostats courses and consulting projects at the Department of Biostatistics, Epidemiology, Biostatistics and Prevention Institute, University of Zurich, Zurich, Switzerland.
Tags: sample size calculation, ROC, Weibull, agreement, biostatistics, bootstrapping, diagnostic test, epidemiology, reliability, reporting, survival

Activity Percentile: 2
Activity Ranking: 52
Registered: 2015-02-09 17:58

Multilevel frailty models - Semiparametric proportional hazard models with K random effects, estimated via the EM-PL algorithm (Horny, 2009)
Tags: biostatistics, clustering, dependence, economics, event histories, event sequence, finance, frailty models, longitudinal data, mixed effect models, mixed model, model estimation, multicenter, multivariate, heterogeneity, overdispersion, survival, semiparametric model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-04-30 07:14

Parametric Frailty Models - Parametric Frailty Models, fitted by maximum marginal likelihood method. Possible basline hazards: Weibull, Exponential, Gompertz, logNormal and loglogistic Possible Frailty distributions: Gamma, Inverse Gaussian and Positive Stable
Tags: survival, frailty models, parametric model, Weibull, Exponential, Gompertz, lognormal, loglogistic, gamma, inverse gaussian, positive stable, clustering, overdispersion, biostatistics, marginal model, marginal likelihood, likelihood, multicenter, heterogeneity, mixed effect models, mixed model

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-10-28 16:21

Simulation of clustered multi-state data - R functions implementing the simulation procedure proposed at http://www.slideshare.net/federicorotolo/a-copulabased-simulation-method-for-clustered-multistate-survival-data to generate survival data with a clustered and multi-state structure.
Tags: simulation, copula, frailty models, multi-state models, competing risks models, biostatistics, clustering, survival

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-12-03 10:40

Survival analysis with BART - Bayesian additive regression trees (BART) have been shown to provide flexible nonparametric modeling of covariates to binary and continuous outcomes. This R package extends BART to time-to-event outcomes with right censoring.
Tags: nonproportional hazards, Bayesian nonparametric, parallel computing, survival

Activity Percentile: 0
Activity Ranking: 0
Registered: 2016-01-06 21:54

abernethy reliability methods - Implementation of functions supporting reliability analyis methods presented in "The New Weibull Handbook" by Dr. Robert B. Abernethy.
Tags: Reliability, C++, R, Regression, Weibull, competing risks models, distribution diagnostics, likelihood, lognormal, optimization, parametric model, quantile regression, regression, sampling, survival, visualization

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-12-30 16:40

c060 - The c060 package provides functions to perform stability selection and parameter tuning for regularized generalized linear models (glmnet, coxnet) and functions to calculate resampling-based predictions error curves for regularized cox models (coxnet).
Tags: GLM, stability selection, survival, tuning parameters
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-06-01 12:37

flexsurv: Flexible survival models - The "flexsurv" package for flexible parametric survival models, including splines, generalized gamma / F, and extensible to user-defined models. This site contains versions up to 0.3.1 - development is now on github.com/chjackson/flexsurv-dev
Tags: survival

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-04-04 11:25

msm: Multi-state models - The "msm" package for continuous-time multi-state models for panel data. From 10 Oct 2016, development moved to https://github.com/chjackson/msm. The final r-forge release is CRAN version 1.6.4.
Tags: multi-state models, survival

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-02-04 15:43

rexpokit - R wrapper for EXPOKIT, a FORTRAN library which allows fast exponentiation of dense and sparse matrices
Tags: matrix manipulation, Phylogeny, multivariate, spatial econometrics, survival
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-06-19 23:30

rstpm2 - Flexible parametric survival models on the log cumulative hazard scale.
Tags: survival

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-11-07 14:13

surroSurv - The surroSurv package allows evaluating a failure-time surrogate endpoint. The package implements the 2-step correlation approach described by Burzykowski et al (JRSS-C 2001), with Clayton, Plackett and Hougaard copulas at first step.
Tags: copula, surrogate, randomized clinical trials, cancer, survival, Cancer

Activity Percentile: 0
Activity Ranking: 0
Registered: 2016-02-19 09:44

survMisc - Extends the survival package with commonly used functions and plots focusing on the Cox model.
Tags: survival, Multiple Comparisons, datasets

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-03-27 17:58

timebart: survival analysis with BART - Bayesian additive regression trees (BART) have been shown to provide flexible nonparametric modeling of covariates to binary and continuous outcomes. This R package extends BART to time-to-event outcomes with right censoring.
Tags: Bayesian nonparametric, nonproportional hazards, parallel computing, survival

Activity Percentile: 0
Activity Ranking: 0
Registered: 2016-07-14 21:42

Thanks to:
Vienna University of Economics and Business University of Wisconsin - Madison Powered By FusionForge