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ANOVA Bayesian Bioinformatics Bioinformatics & Biostatistics Biostatistics C++ Cancer Chemoinformatics Classification Clustering Copynumber DNA Ecology Economics Finance GUI Genetic Algorithms Genetics HTML Machine Learning Machine learning Mixture Multiple Comparisons Multivariate Analysis Multivariate Regression Multivariate Techniques Next generation Sequencing ODE Phylogeny R R-Forge Rcmdr Regression SNP Statistics Time series Visualization Whole-genome bioinformatics biostatistics break detection categorical change detection classification clustering community ecology data mining database datasets dissimilarity distance distributions diversity dynamic systems ecological models ecology econometrics economics epidemiology finance gene expression generalized linear models genetics graphics high dimentional data likelihood linear models linear programming machine learning microarray missing data missing values mixed effect models mixed model model comparison model estimation model selection movement multivariate multivariate regression multivariate statistics non-parametrics nonlinear models nonparametric optimization parametric model permutation tests phylogeny plotting political analysis prediction psychology raster regression remote sensing reporting robust robust statistics simulation soil spatial spatial autocorrelation spatial classes spatial data spatial methods spatial point patterns spatial regression spatio-temporal species distribution models survival teaching text mining time series visualization

12 projects in result set.
Bayesian Model for Rare Variant analysis - BMRV is an R package that can be readily applied to rare variant (RV) association analysis for various traits (continuous, binary and ordinal), designs (independent, family and twin) and genotype data (sequence and imputated).
Tags: Bayesian, Biostatistics, Genetics, Gibbs sampling, Sequence analysis, genetic interaction, genetics, linear models, mixed effect models
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2015-12-11 21:50

Finite Mixure of AFT and FMR models - FMRS package provides estimation and variable selection in Finite Mixture of Accelerated Failure Time Regression (FMAFTR) and Finite Mixture of Regression (FMR) models with a large number of covariates and/or right censoring and heterogeneous structure.
Tags: Bioinformatics, Biostatistics, C++, Cancer, Medical Science, Mixture, Next generation Sequencing, R, Regression, Statistics, lasso, model estimation, model selection, penalized regression, regularization, survival, tuning parameters, variable selection

Activity Percentile: 0
Activity Ranking: 0
Registered: 2016-03-07 02:31

Gene set analysis with asymptotic pvalue - mGSZ is a gene set analysis method based on GSZ statistics (Törönen et al.,2009) and asymptotic p-value. mGSZ is different from the standard GSZ method in that it assigns asymptotic p-values to the gene set scores instead of empirical p-values.
Tags: Gene set analysis, Biostatistics, Bioinformatics

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-02-14 10:16

Modified Gene Set Z-score - Modified Gene Set Z-score (mGSZ) is a gene set analysis method based on Gene Set Z-score and asymptotic p-values.
Tags: Bioinformatics, Biostatistics
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-02-17 12:47

Multilocus Random Mixed Linear Model - Multilocus Random Mixed Linear Model for Genome-wide Association Study
Tags: Bioinformatics, Biostatistics, Genetics, MLM, R, SNP, Whole-genome, mixed model, multi-dimensions
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2016-02-25 14:46

NWFSC assessment code - Fishery stock assessment tools used at the Northwest Fishery Science Center (NWFSC) of NOAA. Code for the analysis of survey and fishery data.
Tags: fishery survey, NWFSC, Bioinformatics & Biostatistics, Biostatistics, Ecology, Fisheries

Activity Percentile: 0
Activity Ranking: 0
Registered: 2012-01-04 22:44

Priority Index - Priority Index or PI accelerates target selection through networking genetic evidence.
Tags: Bioinformatics, Biostatistics, genetics, genomics

Activity Percentile: 87
Activity Ranking: 7
Registered: 2016-04-21 23:06

Probabilistic Index Models - Developing an R-package for a new class of regression models: Probabilistic Index Models.
Tags: Probabilistic Index Models, regression, modeling, nonparametric, semiparametric, Bioinformatics, Bioinformatics & Biostatistics, Biostatistics, Multiple Comparisons, Regression, biostatistics

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-06-09 14:01

Projections using Bayesian APC model - Package implementing Bayesian age-period-cohort models with the focus on projections. BAPC generates age-specific and age-standardized projected rates and predictive distributions.
Tags: Bayesian, Biostatistics, Cancer, R-INLA, epidemiology, forecasting, prediction, projections
This project has not yet categorized itself in the Trove Software Map


Activity Percentile: 0
Activity Ranking: 0
Registered: 2015-03-24 15:10

Sparse group lasso [MOVED TO GITHUB] - Algorithms for solving sparse group lasso optimization problems. [MOVED TO GITHUB] https://github.com/vincent-dk
Tags: sparse group lasso, group lasso, lasso, Bioinformatics, Biostatistics, Classification, Machine Learning, Multivariate Analysis, Multivariate Regression

Activity Percentile: 0
Activity Ranking: 0
Registered: 2011-02-28 13:48

Species Distribution Modelling - sdm is an extendable framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time.
Tags: Bioinformatics, Biostatistics, Ecology, Machine Learning, animal, community ecology, ensemble forecasting, raster, spatial, spatial data, spatial methods, species distribution models, species distributions

Activity Percentile: 0
Activity Ranking: 0
Registered: 2014-05-26 16:09

cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
Tags: C++, Genetics, mixed model, openmp, parallel computing, Bioinformatics, Bioinformatics & Biostatistics, Biostatistics, Gibbs sampling, Regression

Activity Percentile: 0
Activity Ranking: 0
Registered: 2013-05-29 18:34

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