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[casper] Revision 5
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Revision 5


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Author: cstephan
Date: Wed Oct 19 13:15:20 2011 UTC (2 years, 8 months ago)
Log Message:
First running version. passed R checks. Vignette for Rani ready

Changed paths:

Path Details
Directoryadd.files added
Directorydel.files added
Directorypkg/.RData added
Directorypkg/casper/DESCRIPTION modified , text changed
Directorypkg/casper/NAMESPACE modified , text changed
Directorypkg/casper/R/calcExp.R modified , text changed
Directorypkg/casper/R/getDistrs.R modified , text changed
Directorypkg/casper/R/pathCounts.R modified , text changed
Directorypkg/casper/R/procBam.R modified , text changed
Directorypkg/casper/R/procGenome.R modified , text changed
Directorypkg/casper/data/allStSite.txt deleted
Directorypkg/casper/data/asd/ deleted
Directorypkg/casper/data/cstat.cpp deleted
Directorypkg/casper/data/cstat.h deleted
Directorypkg/casper/data/dm3.exonsNI.RData deleted
Directorypkg/casper/data/dm3.newTxs.RData deleted
Directorypkg/casper/data/dm3.txs.RData deleted
Directorypkg/casper/data/main.cpp deleted
Directorypkg/casper/data/mainWORKING.cpp deleted
Directorypkg/casper/data/pathCounts.RData deleted
Directorypkg/casper/data/pathCountsV.RData deleted
Directorypkg/casper/inst/doc/casper.Rnw.old deleted
Directorypkg/casper/src/Debug/ deleted
Directorypkg/casper/src/casper.cpp modified , text changed
Directorypkg/casper/src/exons.dat deleted
Directorypkg/casper/src/fragments.dat deleted
Directorypkg/casper/src/functions.c modified , text changed
Directorypkg/casper/src/header.h modified , text changed
Directorypkg/casper/src/main.cpp deleted
Directorypkg/casper/src/pathCounts.c modified , text changed
Directorypkg/casper/src/procBam.c modified , text changed
Directorypkg/casper/src/qasper2c.sln deleted
Directorypkg/casper/src/qasper2c.suo deleted
Directorypkg/casper/src/qasper2c.vcxproj deleted
Directorypkg/casper/src/qasper2c.vcxproj.filters deleted
Directorypkg/casper/src/qasper2c.vcxproj.user deleted
Directorypkg/casper/src/rcasper.cpp modified , text changed
Directorypkg/casper/src/variants.dat deleted
Directorypkg/casper.Rcheck/ added
Directorypkg/casper.Rcheck/00check.log added
Directorypkg/casper.Rcheck/00install.out added
Directorypkg/casper.Rcheck/Rdlatex.log added
Directorypkg/casper.Rcheck/casper-Ex.R added
Directorypkg/casper.Rcheck/casper-Ex.Rout added
Directorypkg/casper.Rcheck/casper-Ex.ps added
Directorypkg/casper.Rcheck/casper-manual.log added
Directorypkg/casper.Rcheck/casper-manual.pdf added
Directorypkg/casperBeta_0.0.0.tar.gz added

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