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[depmix] Annotation of /tags/release-0.2-0/man/depmix-class.Rd
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Annotation of /tags/release-0.2-0/man/depmix-class.Rd

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Original Path: pkg/man/depmix-class.Rd

1 : ingmarviss 24 \name{depmix-class}
2 : ingmarviss 82
3 : ingmarviss 24 \docType{class}
4 : ingmarviss 82
5 : ingmarviss 24 \alias{depmix-class}
6 : ingmarviss 82
7 : ingmarviss 99 \alias{nresp}
8 :     \alias{nresp,depmix-method}
9 :    
10 :     \alias{ntimes}
11 :     \alias{ntimes,depmix-method}
12 :    
13 : maarten 201 \alias{nstates}
14 :     \alias{nstates,depmix-method}
15 :    
16 :    
17 : ingmarviss 24 \title{Class "depmix"}
18 : ingmarviss 82
19 : ingmarviss 24 \description{A \code{\link{depmix}} model.}
20 : ingmarviss 82
21 : ingmarviss 90 \section{Slots}{
22 : ingmarviss 82
23 : ingmarviss 72 \describe{
24 : ingmarviss 82
25 :     \item{\code{response}:}{List of list of \code{response} objects.}
26 :    
27 : ingmarviss 90 \item{\code{transition}}{List of \code{\link{transInit}} objects.}
28 : ingmarviss 82
29 : ingmarviss 90 \item{\code{prior}:}{\code{\link{transInit}} object.}
30 : ingmarviss 82
31 :     \item{\code{dens}:}{Array of dimension sum(ntimes)*nresp*nstates
32 :     providing the densities of the observed responses for each state.}
33 :    
34 :     \item{\code{trDens}:}{Array of dimension \code{sum(ntimes)}*nstates
35 :     providing the probability of a state transition depending on the
36 :     predictors.}
37 :    
38 :     \item{\code{init}:}{Array of dimension \code{length(ntimes)}*nstates with
39 :     the current predictions for the initial state probabilities.}
40 :    
41 :     \item{\code{stationary}:}{Logical indicating whether the transitions are
42 :     time-dependent or not; for internal use.}
43 :    
44 :     \item{\code{ntimes}:}{A vector containing the lengths of independent time
45 :     series; if data is provided, sum(ntimes) must be equal to
46 :     nrow(data).}
47 :    
48 :     \item{\code{nstates}:}{The number of states of the model.}
49 :    
50 :     \item{\code{nresp}:}{The number of independent responses.}
51 :    
52 :     \item{\code{npars}:}{The total number of parameters of the model. This is not
53 :     the degrees of freedom, ie there are redundancies in the
54 :     parameters, in particular in the multinomial models for the
55 :     transitions and prior.}
56 :    
57 : ingmarviss 72 }
58 : ingmarviss 24 }
59 : ingmarviss 82
60 : ingmarviss 24 \section{Accessor Functions}{
61 : ingmarviss 72 The following functions should be used for accessing the corresponding
62 :     slots:
63 :     \describe{
64 :     \item{\code{npar}:}{The number of parameters of the model.}
65 :     \item{\code{nresp}:}{The number of responses.}
66 :     \item{\code{nstates}:}{The number of states.}
67 :     \item{\code{ntimes}:}{The vector of independent time series lengths.}
68 :     }
69 : ingmarviss 24 }
70 : ingmarviss 82
71 : ingmarviss 24 \author{Ingmar Visser}
72 : ingmarviss 82
73 : ingmarviss 24 \keyword{classes}

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