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Revision 940 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Sep 27 00:50:35 2005 UTC (14 years, 4 months ago) by bates
File length: 1752 byte(s)
Diff to previous 932
Temporary function mer2 to experiment with CHOLMOD-based mixed-effects

Revision 932 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Sep 19 23:04:52 2005 UTC (14 years, 4 months ago) by bates
File length: 1673 byte(s)
Diff to previous 901
Updated DEPS.mkf and some include files

Revision 901 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Sep 6 01:26:11 2005 UTC (14 years, 4 months ago) by bates
File length: 1681 byte(s)
Diff to previous 888
Add "start" argument to lmer

Revision 888 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Sep 1 13:46:21 2005 UTC (14 years, 4 months ago) by bates
File length: 1640 byte(s)
Diff to previous 879
New simulate method for lmer objects

Revision 879 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 30 14:35:05 2005 UTC (14 years, 4 months ago) by bates
File length: 1596 byte(s)
Diff to previous 824
Added simulate generic and method

Revision 824 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Aug 6 20:01:51 2005 UTC (14 years, 5 months ago) by bates
File length: 1518 byte(s)
Diff to previous 815
Allow mcmcsamp on transformed parameters

Revision 815 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sun Jul 24 23:53:40 2005 UTC (14 years, 6 months ago) by bates
File length: 1476 byte(s)
Diff to previous 813
Added lmer_MCMCsamp to the C sources

Revision 813 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jul 21 16:41:42 2005 UTC (14 years, 6 months ago) by bates
File length: 1422 byte(s)
Diff to previous 812
New sampling for glmerMCMC but intermediates are not appropriately PROTECTed

Revision 812 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jul 21 14:59:04 2005 UTC (14 years, 6 months ago) by bates
File length: 1325 byte(s)
Diff to previous 804
Added an rWishart function, which should later be moved to the stats package

Revision 804 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jul 7 20:05:47 2005 UTC (14 years, 6 months ago) by bates
File length: 1255 byte(s)
Diff to previous 782
Preparing for glmmMCMC

Revision 782 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jun 24 23:06:33 2005 UTC (14 years, 7 months ago) by bates
File length: 1239 byte(s)
Diff to previous 781
Adding MCMC capability (currently incomplete)

Revision 781 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jun 24 15:38:43 2005 UTC (14 years, 7 months ago) by bates
File length: 1226 byte(s)
Diff to previous 776
Further development on AGQ and MCMC for glmm models

Revision 776 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 13 19:45:04 2005 UTC (14 years, 7 months ago) by bates
File length: 1134 byte(s)
Diff to previous 775
Setting up for AGQ

Revision 775 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 13 01:22:28 2005 UTC (14 years, 7 months ago) by bates
File length: 1095 byte(s)
Diff to previous 774
Factoring C code in preparation for AGQ

Revision 774 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jun 10 18:40:54 2005 UTC (14 years, 7 months ago) by bates
File length: 1183 byte(s)
Diff to previous 766
Moving devLaplace calculations to C code

Revision 766 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jun 7 23:03:34 2005 UTC (14 years, 7 months ago) by bates
File length: 1186 byte(s)
Diff to previous 761
Isolating and cleaning up the mer, lmer, and glmer functions

Revision 761 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 6 15:51:24 2005 UTC (14 years, 7 months ago) by bates
File length: 1060 byte(s)
Diff to previous 753
Use mer objects; Replace REML slot by method slot

Revision 753 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sun May 29 02:15:35 2005 UTC (14 years, 7 months ago) by bates
File length: 1101 byte(s)
Diff to previous 742
Release 0.95-11

Revision 742 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue May 17 17:45:24 2005 UTC (14 years, 8 months ago) by bates
File length: 1096 byte(s)
Diff to previous 709
Fold bCrosstab.[ch] into lmer.[ch]

Revision 709 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue May 3 16:08:26 2005 UTC (14 years, 8 months ago) by deepayan
File length: 983 byte(s)
Diff to previous 705
changes related to Laplace approximation, including new function to compute parts of the deviance in C code, which doesn't currently work

Revision 705 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Apr 29 14:42:39 2005 UTC (14 years, 8 months ago) by deepayan
File length: 949 byte(s)
Diff to previous 599
additions related to the Laplace approximation in glmm lmer models

Revision 599 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Mar 4 03:49:53 2005 UTC (14 years, 10 months ago) by bates
File length: 864 byte(s)
Diff to previous 536
Added C function lmer_fitted

Revision 536 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Feb 10 08:15:12 2005 UTC (14 years, 11 months ago) by bates
File length: 814 byte(s)
Diff to previous 488
rearranging utility functions in the C code

Revision 488 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Feb 2 19:11:51 2005 UTC (14 years, 11 months ago) by bates
File length: 776 byte(s)
Diff to previous 485
renaming and rearranging classes

Revision 485 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Feb 2 17:20:55 2005 UTC (14 years, 11 months ago) by bates
File length: 784 byte(s)
Diff to previous 478
renaming and rearranging classes

Revision 478 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Feb 2 14:33:51 2005 UTC (14 years, 11 months ago) by bates
File length: 784 byte(s)
Diff to previous 465
Renaming and reorganizing classes

Revision 465 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Jan 29 14:14:01 2005 UTC (14 years, 11 months ago) by bates
File length: 776 byte(s)
Diff to previous 447
Add an externally accessible entry point to lmer_Crosstab

Revision 447 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jan 21 12:17:56 2005 UTC (15 years ago) by bates
File length: 744 byte(s)
Diff to previous 415
Change char flags to cblas enum types

Revision 415 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jan 3 19:05:11 2005 UTC (15 years ago) by bates
File length: 763 byte(s)
Copied from: pkg/src/lmeRep.h revision 410
Diff to previous 410
Change to the lmer representation

Revision 410 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Dec 28 14:51:42 2004 UTC (15 years ago) by bates
Original Path: pkg/src/lmeRep.h
File length: 927 byte(s)
Diff to previous 300
Working on the lmer classes

Revision 300 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Oct 12 15:44:15 2004 UTC (15 years, 3 months ago) by bates
Original Path: pkg/src/lmeRep.h
File length: 763 byte(s)
Diff to previous 296
Adding lmeRep_L_sm and support routines

Revision 296 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Oct 4 17:13:29 2004 UTC (15 years, 3 months ago) by bates
Original Path: pkg/src/lmeRep.h
File length: 781 byte(s)
Diff to previous 268
Add registration of .Call functions

Revision 268 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 31 19:13:33 2004 UTC (15 years, 4 months ago) by bates
Original Path: pkg/src/lmeRep.h
File length: 718 byte(s)
Diff to previous 257
New version

Revision 257 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 24 02:08:08 2004 UTC (15 years, 5 months ago) by bates
Original Path: pkg/src/lmeRep.h
File length: 676 byte(s)
Diff to previous 255
Remove taucs, add lmeRep, new release

Revision 255 - (view) (download) (as text) (annotate) - [select for diffs]
Added Fri Aug 20 16:27:15 2004 UTC (15 years, 5 months ago) by bates
Original Path: pkg/src/lmeRep.h
File length: 648 byte(s)
Add the lmeRep class

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