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Revision 2175 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Apr 23 11:23:50 2008 UTC (11 years, 7 months ago) by mmaechler
File length: 7914 byte(s)
Diff to previous 2121
more determinant(); MANY consistency cleanups, found by checkMatrix(); .. (see ChangeLog)

Revision 2121 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Mar 4 22:01:33 2008 UTC (11 years, 9 months ago) by maechler
File length: 7519 byte(s)
Diff to previous 2120
+ forgotten Rversion.h

Revision 2120 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Mar 4 21:44:41 2008 UTC (11 years, 9 months ago) by maechler
File length: 7497 byte(s)
Diff to previous 2117
use diagU2N in more places; also new Tsparse_diagU2N()

Revision 2117 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Mar 3 14:35:25 2008 UTC (11 years, 9 months ago) by maechler
File length: 7433 byte(s)
Diff to previous 2115
s/norm_type/La_norm_type/ in order to move to R-devel

Revision 2115 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Feb 23 09:23:17 2008 UTC (11 years, 9 months ago) by maechler
File length: 7430 byte(s)
Diff to previous 2113
+ forceSymmetric(); generalize ddense_to_symmetric to dense_to_s.. and ddense_band to dense_band allowing simplified methods;  Matrix() and many man/*Rd : replace many as(*, <specific>) by as(*, <virtual superclass>)

Revision 2113 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Feb 18 08:27:41 2008 UTC (11 years, 9 months ago) by maechler
File length: 7153 byte(s)
Diff to previous 2104
miscellaneous cleanup; typically indexing and coercion

Revision 2104 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Jan 12 16:09:01 2008 UTC (11 years, 10 months ago) by bates
File length: 7103 byte(s)
Diff to previous 2061
Documentation errors caught by doxygen

Revision 2061 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Sep 1 20:37:11 2007 UTC (12 years, 3 months ago) by maechler
File length: 7108 byte(s)
Diff to previous 2049
make alloca working for Sun

Revision 2049 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 14 22:22:24 2007 UTC (12 years, 3 months ago) by bates
File length: 7004 byte(s)
Diff to previous 2045
Remove deprecated function writeHB and its methods; switch writeMM to use CHOLMOD code; repair readMM

Revision 2045 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 14 13:07:10 2007 UTC (12 years, 3 months ago) by bates
File length: 6985 byte(s)
Diff to previous 1960
declare alloca

Revision 1960 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jul 6 16:54:43 2007 UTC (12 years, 5 months ago) by maechler
File length: 6905 byte(s)
Diff to previous 1867
merge 'branches/Matrix-APIchange' back into the trunk

Revision 1867 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 4 17:13:02 2007 UTC (12 years, 6 months ago) by bates
File length: 6836 byte(s)
Diff to previous 1747
Remove warnings after change to const char* CHAR

Revision 1747 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jan 29 20:17:33 2007 UTC (12 years, 10 months ago) by maechler
File length: 6818 byte(s)
Diff to previous 1736
many more coercions for diag(), "!", etc; see ChangeLog

Revision 1736 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jan 23 17:09:41 2007 UTC (12 years, 10 months ago) by maechler
File length: 6479 byte(s)
Diff to previous 1725
+ SET_Dimnames; more dimnames setting and other cosmetic

Revision 1725 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jan 17 08:01:10 2007 UTC (12 years, 10 months ago) by maechler
File length: 6116 byte(s)
Diff to previous 1654
accomplished quite a few small FIXMEs; see ChangeLog

Revision 1654 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Oct 27 16:58:15 2006 UTC (13 years, 1 month ago) by maechler
File length: 5764 byte(s)
Diff to previous 1555
miscellaneous "fixes" mostly in ChangeLog and/or related to diagonalMatrix

Revision 1555 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 13 14:47:28 2006 UTC (13 years, 2 months ago) by bates
File length: 5723 byte(s)
Diff to previous 1548
Move checks on column sorting of CsparseMatrix objects to Csparse_validate

Revision 1548 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Sep 11 22:13:07 2006 UTC (13 years, 2 months ago) by maechler
File length: 5705 byte(s)
Diff to previous 1546
new nMatrix and subclasses; lsparse change to have x slot; many consequences

Revision 1546 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Sep 11 14:49:05 2006 UTC (13 years, 2 months ago) by bates
File length: 5575 byte(s)
Diff to previous 1517
Move the alloc_d**Matrix utility functions from the Matrix package to the lme4 package

Revision 1517 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 6 13:34:03 2006 UTC (13 years, 3 months ago) by bates
File length: 5896 byte(s)
Diff to previous 1507
Cleanup

Revision 1507 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Sep 4 18:41:34 2006 UTC (13 years, 3 months ago) by bates
File length: 8858 byte(s)
Diff to previous 1463
Merging changes from Matrix-nolmer branch

Revision 1463 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 29 22:30:57 2006 UTC (13 years, 3 months ago) by bates
File length: 9298 byte(s)
Diff to previous 1461
Promotion of %*% and solve to RHS of ddenseMatrix

Revision 1461 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 29 16:17:27 2006 UTC (13 years, 3 months ago) by bates
File length: 9298 byte(s)
Diff to previous 1449
Define and use class_P and mMatrix_as_dgeMatrix

Revision 1449 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Aug 26 13:00:36 2006 UTC (13 years, 3 months ago) by bates
File length: 9102 byte(s)
Diff to previous 1441
Remove sections of code that are no longer used

Revision 1441 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Aug 24 21:59:49 2006 UTC (13 years, 3 months ago) by bates
File length: 9495 byte(s)
Diff to previous 1432
Add ddiMatrix,dtpMatrix, dspMatrix and dppMatrix conversions. Remove no-longer-used functions.

Revision 1432 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Aug 24 16:21:18 2006 UTC (13 years, 3 months ago) by maechler
File length: 9447 byte(s)
Diff to previous 1416
eliminate classed argument from dup_mM*() and dependencies

Revision 1416 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 22 22:44:14 2006 UTC (13 years, 3 months ago) by bates
File length: 9461 byte(s)
Diff to previous 1395
Move check_class to Mutils.h and some bug fixes

Revision 1395 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sun Aug 20 03:15:25 2006 UTC (13 years, 3 months ago) by bates
File length: 8961 byte(s)
Diff to previous 1394
Added dup_mMatrix_as_dgeMatrix utility

Revision 1394 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Aug 19 12:16:16 2006 UTC (13 years, 3 months ago) by maechler
File length: 8907 byte(s)
Diff to previous 1200
add comment on why Rdefines.h

Revision 1200 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jan 23 16:01:20 2006 UTC (13 years, 10 months ago) by maechler
File length: 8896 byte(s)
Diff to previous 1164
make*_(triangular|symmetric) : now for ldense* as well

Revision 1164 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Jan 14 23:40:42 2006 UTC (13 years, 10 months ago) by maechler
File length: 8733 byte(s)
Diff to previous 1162
new dMatrix_validate and dense_nonpacked_validate

Revision 1162 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jan 13 23:47:38 2006 UTC (13 years, 10 months ago) by bates
File length: 8692 byte(s)
Diff to previous 963
Move glmer reweighting to internal_update_ZXy; rearrange the deck chairs

Revision 963 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Oct 3 01:44:56 2005 UTC (14 years, 2 months ago) by bates
File length: 8409 byte(s)
Diff to previous 952
Modifications to mer2

Revision 952 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 28 19:19:19 2005 UTC (14 years, 2 months ago) by maechler
File length: 8343 byte(s)
Diff to previous 951
packed_to_full_(double|int) and full_to_packed_*

Revision 951 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 28 12:42:51 2005 UTC (14 years, 2 months ago) by maechler
File length: 8127 byte(s)
Diff to previous 943
use uplo_P() and diag_P() macros instead of *_value() functions

Revision 943 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 28 08:52:22 2005 UTC (14 years, 2 months ago) by maechler
File length: 7983 byte(s)
Diff to previous 890
+ uplo_value(), diag_value()

Revision 890 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Sep 1 17:18:08 2005 UTC (14 years, 3 months ago) by maechler
File length: 7932 byte(s)
Diff to previous 862
add triangularMatrix_validate and symmetric* to C code and make (re!)use of it - not quite everywhere?

Revision 862 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Aug 18 21:31:07 2005 UTC (14 years, 3 months ago) by bates
File length: 7886 byte(s)
Diff to previous 796
Coercion method for graphNEL to sparseMatrix class

Revision 796 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jul 4 14:57:28 2005 UTC (14 years, 5 months ago) by bates
File length: 7841 byte(s)
Diff to previous 766
Added utilities vecSum and vecIncrement

Revision 766 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jun 7 23:03:34 2005 UTC (14 years, 6 months ago) by bates
File length: 7084 byte(s)
Diff to previous 738
Isolating and cleaning up the mer, lmer, and glmer functions

Revision 738 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue May 17 17:25:31 2005 UTC (14 years, 6 months ago) by bates
File length: 7326 byte(s)
Diff to previous 679
Added Matrix_expand_pointers (callable from R) and moved utility for duplicating slots

Revision 679 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Mar 30 14:42:36 2005 UTC (14 years, 8 months ago) by bates
File length: 7135 byte(s)
Diff to previous 597
Rename expand_column_pointers to expand_cmpPt (expand compressed pointers)

Revision 597 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Mar 3 19:58:59 2005 UTC (14 years, 9 months ago) by bates
File length: 7145 byte(s)
Diff to previous 592
Methods and coercions for the dtpMatrix class

Revision 592 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Mar 3 05:16:50 2005 UTC (14 years, 9 months ago) by bates
File length: 6525 byte(s)
Diff to previous 588
Clean up *_validate functions

Revision 588 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Mar 2 18:19:51 2005 UTC (14 years, 9 months ago) by bates
File length: 6256 byte(s)
Diff to previous 582
shorten csc_components_transpose to csc_compTr

Revision 582 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Feb 28 18:15:21 2005 UTC (14 years, 9 months ago) by bates
File length: 6293 byte(s)
Diff to previous 572
Internationalization and localization

Revision 572 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Feb 25 14:11:54 2005 UTC (14 years, 9 months ago) by bates
File length: 5715 byte(s)
Diff to previous 565
Inlined function declarations moved within the conditional expression

Revision 565 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Feb 22 01:15:45 2005 UTC (14 years, 9 months ago) by bates
File length: 5716 byte(s)
Diff to previous 536
Clean up documentation errors exposed by doxygen

Revision 536 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Feb 10 08:15:12 2005 UTC (14 years, 9 months ago) by bates
File length: 4995 byte(s)
Diff to previous 493
rearranging utility functions in the C code

Revision 493 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Feb 3 18:47:20 2005 UTC (14 years, 10 months ago) by bates
File length: 1839 byte(s)
Diff to previous 478
Move the make_named function to Mutils as Matrix_make_named

Revision 478 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Feb 2 14:33:51 2005 UTC (14 years, 10 months ago) by bates
File length: 1793 byte(s)
Diff to previous 476
Renaming and reorganizing classes

Revision 476 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Feb 2 11:51:24 2005 UTC (14 years, 10 months ago) by bates
File length: 1793 byte(s)
Diff to previous 447
Change name of slot from factorization to factors

Revision 447 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jan 21 12:17:56 2005 UTC (14 years, 10 months ago) by bates
File length: 1805 byte(s)
Diff to previous 441
Change char flags to cblas enum types

Revision 441 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jan 19 11:22:07 2005 UTC (14 years, 10 months ago) by bates
File length: 1485 byte(s)
Diff to previous 432
See if use of cblas would be a good idea

Revision 432 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jan 13 19:34:37 2005 UTC (14 years, 10 months ago) by bates
File length: 1465 byte(s)
Diff to previous 412
Define the AZERO macro

Revision 412 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Dec 28 15:06:55 2004 UTC (14 years, 11 months ago) by bates
File length: 1355 byte(s)
Diff to previous 329


Revision 329 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Nov 12 21:01:19 2004 UTC (15 years ago) by bates
File length: 1506 byte(s)
Diff to previous 296
Keep symbols and filenames consistent

Revision 296 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Oct 4 17:13:29 2004 UTC (15 years, 2 months ago) by bates
File length: 2112 byte(s)
Diff to previous 272
Add registration of .Call functions

Revision 272 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Sep 2 23:14:00 2004 UTC (15 years, 3 months ago) by bates
File length: 2110 byte(s)
Diff to previous 268
Add cscBlocked, tweak lmeRep

Revision 268 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 31 19:13:33 2004 UTC (15 years, 3 months ago) by bates
File length: 2107 byte(s)
Diff to previous 263
New version

Revision 263 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Aug 26 16:01:35 2004 UTC (15 years, 3 months ago) by bates
File length: 2086 byte(s)
Diff to previous 255
extending lmeRep to multiple nested grouping factors

Revision 255 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Aug 20 16:27:15 2004 UTC (15 years, 3 months ago) by bates
File length: 2052 byte(s)
Diff to previous 241
Add the lmeRep class

Revision 241 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jul 7 18:23:11 2004 UTC (15 years, 5 months ago) by bates
File length: 2011 byte(s)
Diff to previous 164
Remove pdMat classes

Revision 164 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri May 14 21:00:04 2004 UTC (15 years, 6 months ago) by bates
File length: 2169 byte(s)
Diff to previous 159
Moving utilities to Matrix package

Revision 159 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sun May 9 22:06:53 2004 UTC (15 years, 7 months ago) by bates
File length: 2037 byte(s)
Diff to previous 10
Remove storage of L-inverse

Revision 10 - (view) (download) (as text) (annotate) - [select for diffs]
Added Mon Mar 22 20:20:05 2004 UTC (15 years, 8 months ago) by bates
File length: 2094 byte(s)
Initial import

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