add comment on why Rdefines.h

make*_(triangular|symmetric) : now for ldense* as well

new dMatrix_validate and dense_nonpacked_validate

Move glmer reweighting to internal_update_ZXy; rearrange the deck chairs

Modifications to mer2

packed_to_full_(double|int) and full_to_packed_*

use uplo_P() and diag_P() macros instead of *_value() functions

+ uplo_value(), diag_value()

add triangularMatrix_validate and symmetric* to C code and make (re!)use of it - not quite everywhere?

Coercion method for graphNEL to sparseMatrix class

Added utilities vecSum and vecIncrement

Isolating and cleaning up the mer, lmer, and glmer functions

Added Matrix_expand_pointers (callable from R) and moved utility for duplicating slots

Rename expand_column_pointers to expand_cmpPt (expand compressed pointers)

Methods and coercions for the dtpMatrix class

Clean up *_validate functions

shorten csc_components_transpose to csc_compTr

Internationalization and localization

Inlined function declarations moved within the conditional expression

Clean up documentation errors exposed by doxygen

rearranging utility functions in the C code

Move the make_named function to Mutils as Matrix_make_named

Renaming and reorganizing classes

Change name of slot from factorization to factors

Change char flags to cblas enum types

See if use of cblas would be a good idea

Define the AZERO macro

Keep symbols and filenames consistent

Add registration of .Call functions

Add cscBlocked, tweak lmeRep

New version

extending lmeRep to multiple nested grouping factors

Add the lmeRep class

Remove pdMat classes

Moving utilities to Matrix package

Remove storage of L-inverse

Initial import