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[matrix] Diff of /pkg/src/Mutils.h
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Diff of /pkg/src/Mutils.h

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revision 1555, Wed Sep 13 14:47:28 2006 UTC revision 2113, Mon Feb 18 08:27:41 2008 UTC
# Line 5  Line 5 
5  extern "C" {  extern "C" {
6  #endif  #endif
7    
8  #include <Rdefines.h> /* Rinternals.h + GET_SLOT etc */  #include <ctype.h>
9  #include <R.h>  /* includes Rconfig.h */  #include <R.h>  /* includes Rconfig.h */
10    #include <Rdefines.h> /* Rinternals.h + GET_SLOT etc */
11    
12  #ifdef ENABLE_NLS  #ifdef ENABLE_NLS
13  #include <libintl.h>  #include <libintl.h>
# Line 15  Line 16 
16  #define _(String) (String)  #define _(String) (String)
17  #endif  #endif
18    
19    #ifdef __GNUC__
20    # undef alloca
21    # define alloca(x) __builtin_alloca((x))
22    #else
23    /* this is necessary (and sufficient) for Solaris 10: */
24    #ifdef __sun
25    # include <alloca.h>
26    #endif
27    #endif
28    
29    #define Alloca(n, t)   (t *) alloca( (size_t) ( (n) * sizeof(t) ) )
30    
31  SEXP triangularMatrix_validate(SEXP obj);  SEXP triangularMatrix_validate(SEXP obj);
32  SEXP symmetricMatrix_validate(SEXP obj);  SEXP symmetricMatrix_validate(SEXP obj);
33  SEXP dense_nonpacked_validate(SEXP obj);  SEXP dense_nonpacked_validate(SEXP obj);
# Line 37  Line 50 
50  #define LFT CblasLeft  #define LFT CblasLeft
51  #define RGT CblasRight  #define RGT CblasRight
52    
53  char norm_type(char *typstr);  char norm_type(const char *typstr);
54  char rcond_type(char *typstr);  char rcond_type(const char *typstr);
55  double get_double_by_name(SEXP obj, char *nm);  double get_double_by_name(SEXP obj, char *nm);
56  SEXP set_double_by_name(SEXP obj, double val, char *nm);  SEXP set_double_by_name(SEXP obj, double val, char *nm);
57  SEXP as_det_obj(double val, int log, int sign);  SEXP as_det_obj(double val, int log, int sign);
# Line 51  Line 64 
64  /* SEXP csc_check_column_sorting(SEXP A); */  /* SEXP csc_check_column_sorting(SEXP A); */
65  SEXP Matrix_make_named(int TYP, char **names);  SEXP Matrix_make_named(int TYP, char **names);
66  SEXP check_scalar_string(SEXP sP, char *vals, char *nm);  SEXP check_scalar_string(SEXP sP, char *vals, char *nm);
67  double *packed_getDiag(double *dest, SEXP x);  Rboolean equal_string_vectors(SEXP s1, SEXP s2);
68    
69    void d_packed_getDiag(double *dest, SEXP x, int n);
70    void l_packed_getDiag(   int *dest, SEXP x, int n);
71    void tr_d_packed_getDiag(double *dest, SEXP x);
72    void tr_l_packed_getDiag(   int *dest, SEXP x);
73    
74  SEXP Matrix_getElement(SEXP list, char *nm);  SEXP Matrix_getElement(SEXP list, char *nm);
75    
76  #define PACKED_TO_FULL(TYPE)                                            \  #define PACKED_TO_FULL(TYPE)                                            \
# Line 79  Line 98 
98  #define PACKED_LENGTH(n)   ((n) * ((n) + 1))/2  #define PACKED_LENGTH(n)   ((n) * ((n) + 1))/2
99    
100  /* duplicate the slot with name given by sym from src to dest */  /* duplicate the slot with name given by sym from src to dest */
101    /* FIXME: is not yet used */
102  #define slot_dup(dest, src, sym)  SET_SLOT(dest, sym, duplicate(GET_SLOT(src, sym)))  #define slot_dup(dest, src, sym)  SET_SLOT(dest, sym, duplicate(GET_SLOT(src, sym)))
103    
104    #define slot_nonNull_dup(dest, src, sym)                        \
105        if(GET_SLOT(src, sym) != R_NilValue)                        \
106            SET_SLOT(dest, sym, duplicate(GET_SLOT(src, sym)))
107    
108    /* TODO: Make this faster for the case where dimnames = list(NULL,NULL)
109     *       and hence don't have to be set ! */
110    #define SET_DimNames(dest, src) slot_dup(dest, src, Matrix_DimNamesSym)
111    
112    
113  #define uplo_P(_x_) CHAR(STRING_ELT(GET_SLOT(_x_, Matrix_uploSym), 0))  #define uplo_P(_x_) CHAR(STRING_ELT(GET_SLOT(_x_, Matrix_uploSym), 0))
114  #define diag_P(_x_) CHAR(STRING_ELT(GET_SLOT(_x_, Matrix_diagSym), 0))  #define diag_P(_x_) CHAR(STRING_ELT(GET_SLOT(_x_, Matrix_diagSym), 0))
115  #define class_P(_x_) CHAR(asChar(getAttrib(_x_, R_ClassSymbol)))  #define class_P(_x_) CHAR(asChar(getAttrib(_x_, R_ClassSymbol)))
116    
117    /* should also work for "matrix" matrices: */
118    #define Real_KIND(_x_)  (IS_S4_OBJECT(_x_) ? Real_kind(_x_) : \
119                             (isReal(_x_) ? 0 : (isLogical(_x_) ? 1 : -1)))
120    
121    /* requires 'x' slot: */
122  #define Real_kind(_x_)  (isReal(GET_SLOT(_x_, Matrix_xSym)) ? 0 :       \  #define Real_kind(_x_)  (isReal(GET_SLOT(_x_, Matrix_xSym)) ? 0 :       \
123                           (isLogical(GET_SLOT(_x_, Matrix_xSym)) ? 1 :   \                           (isLogical(GET_SLOT(_x_, Matrix_xSym)) ? 1 : -1))
                           -1))  
124    
125    
126  /**  /**
# Line 116  Line 149 
149   * this behavior changes then ALLOC_SLOT must use SET_SLOT followed by   * this behavior changes then ALLOC_SLOT must use SET_SLOT followed by
150   * GET_SLOT to ensure that the value returned is indeed the SEXP in   * GET_SLOT to ensure that the value returned is indeed the SEXP in
151   * the slot.   * the slot.
152     * NOTE:  GET_SLOT(x, what)        :== R_do_slot       (x, what)
153     * ----   SET_SLOT(x, what, value) :== R_do_slot_assign(x, what, value)
154     * and the R_do_slot* are in src/main/attrib.c
155   *   *
156   * @param obj object in which to assign the slot   * @param obj object in which to assign the slot
157   * @param nm name of the slot, as an R name object   * @param nm name of the slot, as an R name object
# Line 163  Line 199 
199  SEXP Matrix_expand_pointers(SEXP pP);  SEXP Matrix_expand_pointers(SEXP pP);
200    
201  SEXP dup_mMatrix_as_dgeMatrix(SEXP A);  SEXP dup_mMatrix_as_dgeMatrix(SEXP A);
202    SEXP dup_mMatrix_as_geMatrix (SEXP A);
203    
204    SEXP new_dgeMatrix(int nrow, int ncol);
205    
206  static R_INLINE SEXP  static R_INLINE SEXP
207  mMatrix_as_dgeMatrix(SEXP A)  mMatrix_as_dgeMatrix(SEXP A)
# Line 170  Line 209 
209      return strcmp(class_P(A), "dgeMatrix") ? dup_mMatrix_as_dgeMatrix(A) : A;      return strcmp(class_P(A), "dgeMatrix") ? dup_mMatrix_as_dgeMatrix(A) : A;
210  }  }
211    
212    static R_INLINE SEXP
213    mMatrix_as_geMatrix(SEXP A)
214    {
215        return strcmp(class_P(A) + 1, "geMatrix") ? dup_mMatrix_as_geMatrix(A) : A;
216    }
217    
218  /**  /**
219   * Return the 0-based index of a string match in a vector of strings   * Return the 0-based index of a string match in a vector of strings
220   * terminated by an empty string.  Returns -1 for no match.   * terminated by an empty string.  Returns -1 for no match.
221   *   *
222   * @param dest class string to match   * @param class string to match
223   * @param valid vector of possible matches terminated by an empty string   * @param valid vector of possible matches terminated by an empty string
224   *   *
225   * @return index of match or -1 for no match   * @return index of match or -1 for no match
226   */   */
227  static R_INLINE int  static R_INLINE int
228  Matrix_check_class(char *class, char **valid)  Matrix_check_class(const char *class, char **valid)
229  {  {
230      int ans;      int ans;
231      for (ans = 0; ; ans++) {      for (ans = 0; ; ans++) {

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