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[matrix] Diff of /pkg/R/AllClass.R
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Diff of /pkg/R/AllClass.R

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revision 962, Mon Oct 3 01:44:14 2005 UTC revision 963, Mon Oct 3 01:44:56 2005 UTC
# Line 437  Line 437 
437  setClass("mer2",  setClass("mer2",
438           representation(           representation(
439                          flist = "list", # list of grouping factors                          flist = "list", # list of grouping factors
440                          perm = "list",  # list of permutations of levels (0-based)                          L = "list",     # lower Cholesky factor of Z'Z + Omega
441                          Parent = "integer",# elimination tree                          RXX = "dgeMatrix", # Augmented RXX component or its inverse
442                          bVar = "list",  # list of conditional variance factors (upper triangle)                          RZX = "dtrMatrix", # Augmented RZX component or its inverse
443                          L = "list",     # list of blocks of L                          XtX = "dpoMatrix", # Original X'X matrix
444                          ZZpO = "dsCMatrix", # Z'Z + Omega                          ZtZ = "dsCMatrix", # Original Z'Z
445                            ZtX = "dgeMatrix", # Original Z'X matrix
446                          Omega = "list", # list of relative precision matrices                          Omega = "list", # list of relative precision matrices
447                          method = "character", # parameter estimation method                          method = "character", # parameter estimation method
448                          cnames = "list",# column names of model matrices                          cnames = "list",# column names of model matrices
# Line 451  Line 452 
452                                          # model matrices and number of observations                                          # model matrices and number of observations
453                          Gp = "integer", # Pointers to groups of rows in RZX                          Gp = "integer", # Pointers to groups of rows in RZX
454                          status = "logical"                          status = "logical"
455                          ),                          )
456           validity = function(object) {          )
              .Call("lmer_validate", object, PACKAGE = "Matrix")  
          })  
457    
458  ## Representation of a linear or generalized linear mixed effects model  ## Representation of a linear or generalized linear mixed effects model
459  setClass("lmer",  setClass("lmer",

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