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Revision 3232 - Directory Listing
Modified Mon Sep 4 15:23:18 2017 UTC (3 months, 1 week ago) by mmaechler
fast crossprod() and kronecker() methods for <indMatrix, indMatrix>

Revision 3228 - Directory Listing
Modified Mon Aug 21 16:00:27 2017 UTC (3 months, 3 weeks ago) by mmaechler
update

Revision 3224 - Directory Listing
Modified Tue Aug 8 21:02:46 2017 UTC (4 months, 1 week ago) by mmaechler
R 3.4.1 is not sufficient for qr.coef(qr(*,LAPACK)) to have names

Revision 3222 - Directory Listing
Modified Tue Aug 8 16:33:52 2017 UTC (4 months, 1 week ago) by mmaechler
export .trDiagonal()

Revision 3221 - Directory Listing
Modified Mon Aug 7 20:31:15 2017 UTC (4 months, 1 week ago) by mmaechler
finally fix the  qr.coef() - permuted names -- bug

Revision 3219 - Directory Listing
Modified Sat Aug 5 11:48:00 2017 UTC (4 months, 1 week ago) by mmaechler
new .asmatrix() -- trying to deprecate as.matrix() via .Matrix.avoiding.as.matrix <- TRUE --- but this will not be released
this gives WARNING (undocumented "svn") in R < 3.5.0(= R-devel)

Revision 3218 - Directory Listing
Modified Tue Jun 20 21:24:18 2017 UTC (5 months, 3 weeks ago) by mmaechler
rankMatrix(matrix(0, *)) now gives 0 as it should

Revision 3211 - Directory Listing
Modified Wed Mar 8 11:01:35 2017 UTC (9 months, 1 week ago) by mmaechler
which() methods: now obeying `useNames=TRUE` [and not needing .local() wrapper

Revision 3210 - Directory Listing
Modified Wed Mar 8 09:09:49 2017 UTC (9 months, 1 week ago) by mmaechler
tweaks + examples for c.sparseVector()

Revision 3208 - Directory Listing
Modified Tue Mar 7 18:37:39 2017 UTC (9 months, 1 week ago) by mmaechler
+ sparseVector() without `x`

Revision 3206 - Directory Listing
Modified Thu Feb 9 16:23:17 2017 UTC (10 months ago) by mmaechler
norm(x,..) now calls base::norm when x is a traditional matrix, and allows  type="2" also for our methods, calling svd() via new (hidden) norm2().

Revision 3203 - Directory Listing
Modified Tue Jan 31 15:46:36 2017 UTC (10 months, 1 week ago) by mmaechler
Ops work now work e.g. for  table() + Matrix()

Revision 3195 - Directory Listing
Modified Wed Nov 23 11:08:45 2016 UTC (12 months, 3 weeks ago) by mmaechler
rep(<Matrix>, *);  subsetting sparseVectors, etc

Revision 3193 - Directory Listing
Modified Fri Sep 30 13:00:01 2016 UTC (14 months, 2 weeks ago) by mmaechler
0-length and 0-length matrix behavior with <Ops> now compatible to R (devel) 3.4.0

Revision 3192 - Directory Listing
Modified Tue Sep 27 13:23:32 2016 UTC (14 months, 2 weeks ago) by mmaechler
cosmetic; intermediate release Version 1.2-7.2

Revision 3188 - Directory Listing
Modified Fri Sep 9 15:03:53 2016 UTC (15 months ago) by mmaechler
 s/http/https/ in CRAN urls

Revision 3184 - Directory Listing
Modified Sat Aug 27 10:08:32 2016 UTC (15 months, 2 weeks ago) by mmaechler
KhatriRao(X,Y) for all-0-arguments

Revision 3183 - Directory Listing
Modified Fri Aug 19 15:47:35 2016 UTC (15 months, 3 weeks ago) by mmaechler
bandSparse() : now return "triangularMatrix" whenever obvious

Revision 3181 - Directory Listing
Modified Thu Aug 4 16:50:19 2016 UTC (16 months, 1 week ago) by mmaechler
add bdiag_m() --- fast bdiag() for *many* small  k x k --- to example

Revision 3177 - Directory Listing
Modified Thu Apr 28 14:47:39 2016 UTC (19 months, 2 weeks ago) by mmaechler
Rd macros only available in R >= 3.2.0

Revision 3167 - Directory Listing
Modified Sat Apr 9 21:52:14 2016 UTC (20 months ago) by mmaechler
- fix  Diagonal(.) %*%  0-extent dense
- fast isSymmetric(<dense asymmetric large>)
- isSymmetric() now works for  "indMatrix"

Revision 3159 - Directory Listing
Modified Tue Feb 23 17:42:22 2016 UTC (21 months, 3 weeks ago) by mmaechler
fix \link[sp] (sp package change)

Revision 3158 - Directory Listing
Modified Tue Jan 26 10:45:46 2016 UTC (22 months, 2 weeks ago) by mmaechler
sparseMatrix(...., triangular ..); docu updates

Revision 3154 - Directory Listing
Modified Mon Nov 16 14:58:47 2015 UTC (2 years ago) by mmaechler
change as.vector() from [two-argument] multi dispatch to single dispatch (so it works with current R-devel) - thanks to patch from Michael Lawrence

Revision 3153 - Directory Listing
Modified Mon Nov 16 14:38:14 2015 UTC (2 years ago) by mmaechler
more printSpMatrix2() changes and minimal documentation;
NB: probably tobe improved in the future

Revision 3143 - Directory Listing
Modified Wed Sep 2 21:29:32 2015 UTC (2 years, 3 months ago) by mmaechler
export MatrixClass() - and use e.g., in "Math", fixing bug in n.CMatrix treatment for "extended" class; similarly fix as(<>, *) for that case

Revision 3133 - Directory Listing
Modified Wed Jul 15 09:00:48 2015 UTC (2 years, 5 months ago) by mmaechler
TODO et al trivial updates

Revision 3128 - Directory Listing
Modified Tue Jun 2 08:08:16 2015 UTC (2 years, 6 months ago) by mmaechler
open version 1.2-2; now names( colSums() ) are as in "base"

Revision 3127 - Directory Listing
Modified Mon Jun 1 10:17:01 2015 UTC (2 years, 6 months ago) by mmaechler
no need for \donttest{.}

Revision 3125 - Directory Listing
Modified Sat May 30 21:17:17 2015 UTC (2 years, 6 months ago) by mmaechler
More notes about "trellis" plot result,  including  print.trellis()
--> R-forge bug # 6103

Revision 3123 - Directory Listing
Modified Sat May 30 15:54:44 2015 UTC (2 years, 6 months ago) by mmaechler
new .fixupDimnames(), used in sparseMatrix(), "initialize", etc

Revision 3122 - Directory Listing
Modified Sat May 30 15:50:25 2015 UTC (2 years, 6 months ago) by mmaechler
a bit more about  symmetricMatrix Dimnames

Revision 3120 - Directory Listing
Modified Fri May 29 14:51:08 2015 UTC (2 years, 6 months ago) by mmaechler
fix crossprod(<matrix>, Diagonal(<n>)) and many such cases; also "dtrMatrix" ones.
 => also fix Matrix(<named diag>) losing dimnames.
Pretty systematic testing of matrix products including dimnames

Revision 3119 - Directory Listing
Modified Wed May 27 07:26:18 2015 UTC (2 years, 6 months ago) by mmaechler
clarifications

Revision 3115 - Directory Listing
Modified Tue May 19 16:34:46 2015 UTC (2 years, 6 months ago) by mmaechler
lu() and qr() now keep dimnames, i.e. propagate them to the factorization, at least for sparse Matrices; not quite ok for sparseQR yet

Revision 3112 - Directory Listing
Modified Tue May 19 16:10:33 2015 UTC (2 years, 6 months ago) by mmaechler
dimnames(<compMatrix>) <- V  now cleans `factors` cache slot

Revision 3111 - Directory Listing
Modified Mon May 18 16:33:06 2015 UTC (2 years, 6 months ago) by mmaechler
mention the decomposition formulas also here

Revision 3099 - Directory Listing
Modified Mon May 4 15:09:25 2015 UTC (2 years, 7 months ago) by mmaechler
fix the  x[] <- <sparse>  bug found by Peter Ralph

Revision 3098 - Directory Listing
Modified Mon May 4 08:57:17 2015 UTC (2 years, 7 months ago) by mmaechler
drop explicit generic for toeplitz()

Revision 3093 - Directory Listing
Modified Thu Apr 2 11:03:06 2015 UTC (2 years, 8 months ago) by mmaechler
fix \link

Revision 3092 - Directory Listing
Modified Thu Apr 2 10:56:59 2015 UTC (2 years, 8 months ago) by mmaechler
more using of ..2dge() and anyNA(); 
testing %&% in test-tools  checkMatrix()

Revision 3088 - Directory Listing
Modified Thu Apr 2 08:29:03 2015 UTC (2 years, 8 months ago) by mmaechler
as(*, "nMatrix") now is allowed also for dense matrices with NA`s

Revision 3079 - Directory Listing
Modified Tue Mar 31 15:29:43 2015 UTC (2 years, 8 months ago) by mmaechler
full (hope ! ;-) support for [t]crossprod(*, boolArith=TRUE)

Revision 3075 - Directory Listing
Modified Mon Mar 30 10:21:58 2015 UTC (2 years, 8 months ago) by mmaechler
rsparseMatrix(*, rand.x=NULL) now creates a random pattern matrix

Revision 3072 - Directory Listing
Modified Fri Mar 27 15:10:48 2015 UTC (2 years, 8 months ago) by mmaechler
advances in boolean arithmetic matrix products: 
%&% and [t]crossprod(*, boolArith = *)

Revision 3069 - Directory Listing
Modified Thu Mar 26 10:00:49 2015 UTC (2 years, 8 months ago) by mmaechler
Fixed FIXME: Csparse o dense - matrix products: now *all*  t() happen in C,
partly thanks to our new  chm_transpose_dense() function.
Csparse o Csparse : now have `boolArith` argument {not entirely finished}
New %&% : Boolean Arithmetic Matrix products      {not entirely finished}
C level: <sparse pattern> o <sparse numeric> : now return numeric "by default" / pattern "on demand"

Revision 3064 - Directory Listing
Modified Tue Mar 17 10:49:42 2015 UTC (2 years, 9 months ago) by mmaechler
drop the "skinny" restriction in indMatrix

Revision 3059 - Directory Listing
Modified Mon Mar 16 17:40:18 2015 UTC (2 years, 9 months ago) by mmaechler
export and speedup  uniqTsparse(); also export anyDuplicatedT()
Improve the documentation about "non-unique Tsparse" matrices etc.
next Version: 1.2-0

Revision 3055 - Directory Listing
Modified Sat Mar 14 21:12:03 2015 UTC (2 years, 9 months ago) by mmaechler
symmetric Matrices -- allow to have dimnames list(NULL, <names>) or list(<names>, NULL) 
and print correctly and are coerced correctly to general matrices etc.
More use of new  stopifnotValid() in tests/

Revision 3048 - Directory Listing
Modified Mon Mar 2 09:52:32 2015 UTC (2 years, 9 months ago) by mmaechler
deprecating cBind()/rBind() for R >= 3.2.0

Revision 3043 - Directory Listing
Modified Sat Feb 14 21:01:16 2015 UTC (2 years, 10 months ago) by mmaechler
no longer use  'EISPACK=TRUE' in eigen()

Revision 3037 - Directory Listing
Modified Sat Jan 17 23:56:03 2015 UTC (2 years, 10 months ago) by mmaechler
add  dimnames(.) checking

Revision 3036 - Directory Listing
Modified Sat Jan 17 23:06:12 2015 UTC (2 years, 10 months ago) by mmaechler
fix the partially wrong dimnames(solve(<dtCMatrix>, <matrix>))

Revision 3034 - Directory Listing
Modified Fri Jan 16 21:20:34 2015 UTC (2 years, 10 months ago) by mmaechler
remove to broken links

Revision 3032 - Directory Listing
Modified Fri Jan 16 15:46:04 2015 UTC (2 years, 10 months ago) by mmaechler
fix the rowMeans(<dgeMatrix>, na.rm=TRUE) bug, reported by Peter Ralph

Revision 3023 - Directory Listing
Modified Sat Dec 20 22:29:49 2014 UTC (2 years, 11 months ago) by mmaechler
tril() and triu() now return correct uplo (if at all)

Revision 3020 - Directory Listing
Modified Tue Oct 14 16:14:02 2014 UTC (3 years, 2 months ago) by mmaechler
dimnames(), notably names(dimnames()) -- primarily in connection with symmpart(), skewpart() and forceSymmetric()

Revision 3018 - Directory Listing
Modified Sat Oct 11 17:52:10 2014 UTC (3 years, 2 months ago) by mmaechler
Fix remaining parts of R-(3.2.0) compatible behavior of matrix products (%*%, [t]crossprod) -- including previous bug of wrong m %*% v in one case

Revision 3015 - Directory Listing
Modified Tue Oct 7 10:56:03 2014 UTC (3 years, 2 months ago) by mmaechler
as(<matrix>, "triangularMatrix") via new mat2tri();
isTriangular() now has optional `upper = NA` also in the *generic*

Revision 3011 - Directory Listing
Modified Mon Oct 6 17:00:48 2014 UTC (3 years, 2 months ago) by mmaechler
misc. matrix-product related cleanups

Revision 3009 - Directory Listing
Modified Mon Oct 6 13:49:41 2014 UTC (3 years, 2 months ago) by mmaechler
deprecate rSparseMatrix() from "test-tools"

Revision 3000 - Directory Listing
Modified Tue Aug 12 10:29:50 2014 UTC (3 years, 4 months ago) by mmaechler
"Math" and "Summary" methods now put in one (newly created) file; more tests for these..

Revision 2998 - Directory Listing
Modified Tue Aug 12 10:27:15 2014 UTC (3 years, 4 months ago) by mmaechler
changes & fixes to %*%, crossprod(),.. notably for diagonal matrices

Revision 2995 - Directory Listing
Modified Thu Jul 24 08:40:46 2014 UTC (3 years, 4 months ago) by mmaechler
invPerm(p) now coerces p to int. if needed

Revision 2990 - Directory Listing
Modified Thu May 8 10:31:52 2014 UTC (3 years, 7 months ago) by mmaechler
fix crossprod(<vec>, <dsyMatrix>) bug, sent from David Ruegamer, LMU.
Keep dimnames in (some more of) such products

Revision 2988 - Directory Listing
Modified Sat Apr 26 19:45:28 2014 UTC (3 years, 7 months ago) by mmaechler
belongs to rev 2987

Revision 2987 - Directory Listing
Modified Sat Apr 26 19:14:30 2014 UTC (3 years, 7 months ago) by mmaechler
new rsparsematrix() {with 'encoding trick'} for random sparse matrices;  
m_encodeInd[2]?() gains new argument 'orig_1'

Revision 2985 - Directory Listing
Modified Sat Apr 12 22:20:38 2014 UTC (3 years, 8 months ago) by mmaechler
typos

Revision 2984 - Directory Listing
Modified Sat Apr 12 21:37:37 2014 UTC (3 years, 8 months ago) by mmaechler
chol(), Cholesky() {and some remnant rcond()...} updates, thanks to Roger Bivand`s questions

Revision 2983 - Directory Listing
Modified Sat Apr 12 21:35:47 2014 UTC (3 years, 8 months ago) by mmaechler
return value of condest(); related docu updates

Revision 2976 - Directory Listing
Modified Tue Mar 25 12:41:40 2014 UTC (3 years, 8 months ago) by mmaechler
+ comments

Revision 2975 - Directory Listing
Modified Mon Mar 24 17:46:07 2014 UTC (3 years, 8 months ago) by mmaechler
workaround fact that R`s  DispatchOrEval() {in coerce.c`s do_anyNA()} 
fails to dispatch for "xMatrix" (even when that would be exported as class)

Revision 2967 - Directory Listing
Modified Tue Mar 11 18:33:16 2014 UTC (3 years, 9 months ago) by mmaechler
Check that the two ways of update() are equivalent
(one update had failed earlier).

Revision 2965 - Directory Listing
Modified Fri Feb 28 22:50:04 2014 UTC (3 years, 9 months ago) by mmaechler
LAZY_DUPLICATE_OK fix

Revision 2964 - Directory Listing
Modified Wed Jan 29 09:52:48 2014 UTC (3 years, 10 months ago) by mmaechler
two more cases where all.equal(*, tol=) has to use 'tolerance'

Revision 2960 - Directory Listing
Modified Tue Jan 28 15:34:21 2014 UTC (3 years, 10 months ago) by mmaechler
A few things at once:
1) all.equal(*,..): "tolerance" instead of "tol";  "check.attributes"
2) All matrix products (%*%, [t]crossprod) in one new *.Rd file: man/matrix-products.Rd
3) R/products.R : Extend matrix products (and consistency tests) 
   a. to work with sparseVectors, 
   b. to correctly work in some cases they did not
   c. to be faster in other cases

Revision 2959 - Directory Listing
Modified Mon Jan 20 16:24:19 2014 UTC (3 years, 10 months ago) by mmaechler
new .dsy2mat(), .dxCmat(), .T2Cmat(); faster as(<dtCmatrix>, "matrix")

Revision 2954 - Directory Listing
Modified Sat Dec 28 15:36:45 2013 UTC (3 years, 11 months ago) by mmaechler
docu cosmetics

Revision 2953 - Directory Listing
Modified Mon Dec 23 21:48:10 2013 UTC (3 years, 11 months ago) by mmaechler
(trivial)

Revision 2952 - Directory Listing
Modified Mon Dec 23 21:21:45 2013 UTC (3 years, 11 months ago) by mmaechler
rankMatrix(*, method="qr.R") also for dense.. is "better" as it seems scale independent

Revision 2949 - Directory Listing
Modified Mon Dec 23 14:09:05 2013 UTC (3 years, 11 months ago) by mmaechler
nicer default behavior of image(<Matrix>, xlim, ylim)

Revision 2947 - Directory Listing
Modified Sat Dec 21 11:39:57 2013 UTC (3 years, 11 months ago) by mmaechler
rankMatrix(.., tol= .) tolerance now *relative* in all cases

Revision 2946 - Directory Listing
Modified Fri Dec 20 10:52:57 2013 UTC (3 years, 11 months ago) by mmaechler
adapt solve() tests to fact that 32bit is different

Revision 2945 - Directory Listing
Modified Thu Dec 19 13:52:00 2013 UTC (3 years, 11 months ago) by mmaechler
new check.gT2sT(); 
clean up in check.gT2tT(); 
more use of all0(.); 
some more coercions of n..Matrix

Revision 2940 - Directory Listing
Modified Tue Dec 17 10:28:49 2013 UTC (3 years, 11 months ago) by mmaechler
more mentioning of sparseMatrix(); 
more mentioning that "TsparseMatrix" class implicitly sums the x`s that belong to
repeated/duplicated (i,j) entries

Revision 2939 - Directory Listing
Modified Tue Dec 17 10:25:54 2013 UTC (3 years, 11 months ago) by mmaechler
sparseMatrix(): new  use.last.ij  argument

Revision 2937 - Directory Listing
Modified Mon Dec 16 10:38:02 2013 UTC (4 years ago) by mmaechler
use rep_len(.) [with wrapper for R < 3.0.0]

Revision 2936 - Directory Listing
Modified Mon Dec 16 10:19:08 2013 UTC (4 years ago) by mmaechler
typo in title

Revision 2935 - Directory Listing
Modified Mon Dec 2 15:59:47 2013 UTC (4 years ago) by mmaechler
oops! forgotten to add before commit

Revision 2934 - Directory Listing
Modified Mon Dec 2 15:56:50 2013 UTC (4 years ago) by mmaechler
T2graph() and graph2T() export old functionality explicitly; 
tweaks in  <graph>  <->  <sparseMatrix>  conversions.  Notably,
as(<graph>, <Matrix>) now more often returns an "n..Matrix" (0/1 pattern), instead of a numeric 
sparse Matrix with all x = 1.

Revision 2933 - Directory Listing
Modified Sun Nov 24 16:02:10 2013 UTC (4 years ago) by mmaechler
rankMatrix(); method="qr" as it is not related to LINPACK for the important case of sparse x:  It now uses *tol* to count non-zero entries in diag(R)

Revision 2932 - Directory Listing
Modified Sun Nov 24 15:38:09 2013 UTC (4 years ago) by mmaechler
qr.coef(), qr.fitted, and qr.resid also work with sparse RHS y

Revision 2927 - Directory Listing
Modified Sat Sep 28 18:50:51 2013 UTC (4 years, 2 months ago) by mmaechler
Matrix 1.0-16: *no* "Depends", just "Imports"

Revision 2923 - Directory Listing
Modified Thu Sep 26 16:38:00 2013 UTC (4 years, 2 months ago) by mmaechler
export fac2sparse() and fac2Sparse(), after adding new giveCsparse option

Revision 2916 - Directory Listing
Modified Mon Sep 16 14:09:40 2013 UTC (4 years, 2 months ago) by mmaechler
new .SuiteSparse_version()

Revision 2912 - Directory Listing
Modified Sat Sep 14 17:09:49 2013 UTC (4 years, 3 months ago) by mmaechler
also fix the r2910-related solve(<dsC.>, <dense>) bug; more testing if(doExtras), "As" example as *.rda

Revision 2904 - Directory Listing
Modified Tue Sep 10 19:43:53 2013 UTC (4 years, 3 months ago) by mmaechler
export isDiagonal() and isTriangular(): other package like to use them

Revision 2901 - Directory Listing
Modified Tue Sep 10 10:45:25 2013 UTC (4 years, 3 months ago) by mmaechler
new  Csparse_to_vector() in C --> faster as(*, "vector") methods

Revision 2900 - Directory Listing
Modified Wed Sep 4 08:30:53 2013 UTC (4 years, 3 months ago) by mmaechler
generalize "indMatrix" to allow "0 samples"; colSums() etc; rbind2().
A  %*% tweak for <ldense> o <lsparse>

Revision 2898 - Directory Listing
Modified Mon Sep 2 15:48:30 2013 UTC (4 years, 3 months ago) by mmaechler
3 new C-->R utilities; notably R_set_factors() -> .set.factors() for caching also from R, not just in C

Revision 2895 - Directory Listing
Modified Sat Aug 31 21:51:18 2013 UTC (4 years, 3 months ago) by mmaechler
move all solve() docu in new solve-methods.Rd

Revision 2894 - Directory Listing
Modified Thu Aug 29 20:10:08 2013 UTC (4 years, 3 months ago) by mmaechler
indMatrix - related updates; notably MatrixClass() was "wrong"

Revision 2892 - Directory Listing
Modified Thu Aug 29 09:58:34 2013 UTC (4 years, 3 months ago) by mmaechler
new indMatrix class from Fabian Scheibl

Revision 2891 - Directory Listing
Modified Fri Aug 16 14:09:01 2013 UTC (4 years, 4 months ago) by mmaechler
determinant(<dpoMatrix>) now goes via chol(), i.e. also just using an existing (cached) Cholesky factor

Revision 2889 - Directory Listing
Modified Thu Aug 8 21:06:22 2013 UTC (4 years, 4 months ago) by mmaechler
Provide  sparse solve() methods for <dgCMatrix> that work via LU decomp.
"Cheap" fix for the lu() -> sometimes/occasionally unsorted columns in resulting L / U matrix bug:
In C, have new  Csparse_sort2(.) version of Csparse_validate() and in 
R a .sortCsparse(.) using .Call(Csparse_sort, x) -- seems to work ok... but want tests and docu;
also can be quite a bit more efficient already in C; -- TODOs

Revision 2888 - Directory Listing
Modified Wed Aug 7 13:56:43 2013 UTC (4 years, 4 months ago) by mmaechler
\link typo; white space

Revision 2887 - Directory Listing
Modified Wed Aug 7 08:50:55 2013 UTC (4 years, 4 months ago) by mmaechler
explain much more (so we can point users here..)

Revision 2886 - Directory Listing
Modified Wed Jul 31 08:33:52 2013 UTC (4 years, 4 months ago) by mmaechler
new optional argument  conv.norm.type="I" 

Revision 2885 - Directory Listing
Modified Fri Jul 26 20:49:21 2013 UTC (4 years, 4 months ago) by mmaechler
solve(<sparse> a, <sparse> b): now if a is symmetric, compute *sparse* result

Revision 2881 - Directory Listing
Modified Wed Jul 3 10:14:19 2013 UTC (4 years, 5 months ago) by mmaechler
provide anyNA(.) methods, for R >= 3.1.0

Revision 2880 - Directory Listing
Modified Wed Jul 3 10:13:08 2013 UTC (4 years, 5 months ago) by mmaechler
rankMatrix(): method="qr.." no longer needs sval --> even more useful for large sparse

Revision 2877 - Directory Listing
Modified Wed May 8 20:59:04 2013 UTC (4 years, 7 months ago) by mmaechler
fix "M[] <- v" bug for unitriangular M

Revision 2876 - Directory Listing
Modified Wed May 8 20:57:08 2013 UTC (4 years, 7 months ago) by mmaechler
cosmetic

Revision 2875 - Directory Listing
Modified Tue May 7 13:26:35 2013 UTC (4 years, 7 months ago) by mmaechler
new KhatriRao()

Revision 2867 - Directory Listing
Modified Sat Feb 2 18:31:28 2013 UTC (4 years, 10 months ago) by mmaechler
Schur(m) now also works for a traditional matrix m

Revision 2865 - Directory Listing
Modified Wed Jan 30 11:14:48 2013 UTC (4 years, 10 months ago) by mmaechler
new utility  is.null.DN() - also used for Matrix construction

Revision 2855 - Directory Listing
Modified Fri Dec 7 07:44:54 2012 UTC (5 years ago) by mmaechler
new isSeq(i, n) ( <==> identical(i, 0:n) ) primitive; qr.qy(qq,y) now returns "vector" when y is one

Revision 2854 - Directory Listing
Modified Thu Nov 22 07:54:41 2012 UTC (5 years ago) by mmaechler
qr(<sparse>) --> <sparseQR> : finally address the structurally rank-deficient case where cs_sqr() produces "spurious" extra rows in Q i.e. V, and R; add checking code for that case

Revision 2853 - Directory Listing
Modified Thu Nov 22 07:52:08 2012 UTC (5 years ago) by mmaechler
provide fast C version and export  invPerm()

Revision 2850 - Directory Listing
Modified Mon Oct 22 13:00:35 2012 UTC (5 years, 1 month ago) by mmaechler
an extra check needed for R-devel (2.16.0) on 32-bit Windows

Revision 2847 - Directory Listing
Modified Thu Oct 18 22:59:33 2012 UTC (5 years, 1 month ago) by mmaechler
fix determinant(update()) example : factor 2 !!

Revision 2846 - Directory Listing
Modified Thu Oct 18 22:08:32 2012 UTC (5 years, 1 month ago) by mmaechler
declare La_norm_type / La_rcond_type

Revision 2843 - Directory Listing
Modified Mon Oct 15 16:15:05 2012 UTC (5 years, 2 months ago) by mmaechler
using .External(Mmatrix, ...) instead of .Internal(matrix(...))

Revision 2841 - Directory Listing
Modified Fri Oct 5 23:42:48 2012 UTC (5 years, 2 months ago) by mmaechler
man "toeplitz" entry for "old R" versions

Revision 2840 - Directory Listing
Modified Fri Oct 5 22:18:37 2012 UTC (5 years, 2 months ago) by mmaechler
.sparseDiagonal() & solve() tweaks (which were not really necessary, but should slightly speed up

Revision 2837 - Directory Listing
Modified Mon Sep 10 21:46:15 2012 UTC (5 years, 3 months ago) by mmaechler
toeplitz(<sparseVector>);  more use of  paste0 ()

Revision 2833 - Directory Listing
Modified Mon Sep 3 07:34:21 2012 UTC (5 years, 3 months ago) by mmaechler
allow writeMM("~/...")

Revision 2832 - Directory Listing
Modified Sat Sep 1 22:10:51 2012 UTC (5 years, 3 months ago) by mmaechler
fix "sparseMatrix" / "numeric"  inefficiency; new sparseVector() constructor

Revision 2831 - Directory Listing
Modified Sat Sep 1 14:28:35 2012 UTC (5 years, 3 months ago) by mmaechler
add rSparseMatrix() to example

Revision 2820 - Directory Listing
Modified Mon Aug 20 14:06:23 2012 UTC (5 years, 3 months ago) by mmaechler
make arithmetic (and "Ops") considerably more efficient for large diagonal matrices {thanks to a report by Harold Doran}

Revision 2815 - Directory Listing
Modified Tue Jul 24 16:05:17 2012 UTC (5 years, 4 months ago) by mmaechler
+ \alias{}

Revision 2814 - Directory Listing
Modified Tue Jul 24 14:02:28 2012 UTC (5 years, 4 months ago) by mmaechler
more Ops are checked and work; new is.finite() and is.infinite() methods (+ checks for them)

Revision 2813 - Directory Listing
Modified Wed Jul 18 16:02:38 2012 UTC (5 years, 4 months ago) by mmaechler
check considerably more "Ops" - and fix, notably for "diagonalMatrix"

Revision 2811 - Directory Listing
Modified Mon Jul 16 15:50:31 2012 UTC (5 years, 5 months ago) by mmaechler
denseMatrix methods for  'diag<-' which preserve (uni)triangularity, symmetry,
etc and are fast via C *_setDiag() functions.
Further, more Ops, e.g. preserving symmetry for  <symmetric> o <diagonal>

Revision 2807 - Directory Listing
Modified Sat Jun 30 17:28:42 2012 UTC (5 years, 5 months ago) by mmaechler
new pack(); more unpack() methods

Revision 2789 - Directory Listing
Modified Tue Jun 19 16:20:32 2012 UTC (5 years, 5 months ago) by mmaechler
update(<Cholesky>, non-symmetric) restored to previous behavior; more docu and tests

Revision 2787 - Directory Listing
Modified Wed Jun 13 12:26:13 2012 UTC (5 years, 6 months ago) by mmaechler
ensure dimnames are kept in %*% and [t]crossprod() in all (?) cases.

Revision 2784 - Directory Listing
Modified Fri Jun 8 17:01:25 2012 UTC (5 years, 6 months ago) by mmaechler
update(Cholesky(.), <dgCMatrix>) now warns and coerces;
many small comments and some more docu for Cholesky() and update(); --> TODO

Revision 2783 - Directory Listing
Modified Wed Jun 6 06:53:52 2012 UTC (5 years, 6 months ago) by mmaechler
More docs/examples on chol()/Cholesky()
 new chk.s() "check dots" utility

Revision 2781 - Directory Listing
Modified Tue Apr 24 16:33:29 2012 UTC (5 years, 7 months ago) by mmaechler
updated \alias{updown, *}

Revision 2780 - Directory Listing
Modified Wed Apr 18 12:20:47 2012 UTC (5 years, 7 months ago) by mmaechler
new  updown() [interface to CHOLMOD_updown] for up-/down-dating a Cholesky decomposition

Revision 2779 - Directory Listing
Modified Mon Apr 16 19:18:40 2012 UTC (5 years, 8 months ago) by mmaechler
add test for  symmetric=TRUE  &  uplo = "L"  case

Revision 2770 - Directory Listing
Modified Mon Mar 5 13:41:23 2012 UTC (5 years, 9 months ago) by mmaechler
fix solve(<dtCMatrix>) seg.fault by using Calloc() instead of Alloca() .. hmm

Revision 2769 - Directory Listing
Modified Sat Mar 3 15:30:26 2012 UTC (5 years, 9 months ago) by mmaechler
sparse.model.matrix(*, verbose) {and cleanup of old stuff}

Revision 2764 - Directory Listing
Modified Fri Feb 17 19:58:29 2012 UTC (5 years, 9 months ago) by mmaechler
fix  -Diagonal(3)

Revision 2762 - Directory Listing
Modified Thu Jan 19 08:51:17 2012 UTC (5 years, 10 months ago) by mmaechler
regression test for the fix in r2759

Revision 2741 - Directory Listing
Modified Fri Dec 9 10:38:51 2011 UTC (6 years ago) by mmaechler
.bdiag(<all "lMatrix">) now works too

Revision 2736 - Directory Listing
Modified Sat Oct 22 21:41:13 2011 UTC (6 years, 1 month ago) by mmaechler
add  qr.qt?y(<sparseQR>, <sparseMatrix>) methods for Terry

Revision 2735 - Directory Listing
Modified Sat Oct 22 20:29:27 2011 UTC (6 years, 1 month ago) by mmaechler
rankMatrix(x, "qr..") for sparse -- part 2

Revision 2734 - Directory Listing
Modified Sat Oct 22 20:07:02 2011 UTC (6 years, 1 month ago) by mmaechler
rankMatrix(x, "qr..") for sparse  x

Revision 2733 - Directory Listing
Modified Sat Oct 22 19:54:53 2011 UTC (6 years, 1 month ago) by mmaechler
mention options("Matrix.quiet" = TRUE) for qr.R()

Revision 2725 - Directory Listing
Modified Sat Oct 8 19:48:44 2011 UTC (6 years, 2 months ago) by mmaechler
cbind2() and rbind2() methods for the mix of sparse & dense

Revision 2711 - Directory Listing
Modified Sat Sep 17 09:34:27 2011 UTC (6 years, 3 months ago) by mmaechler
update (condest; Bunch-Kaufman)

Revision 2708 - Directory Listing
Modified Thu Sep 15 10:07:32 2011 UTC (6 years, 3 months ago) by mmaechler
bandSparse(*, giveCsparse=TRUE) - option to return Tsparse, ditto for sparseMatrix()

Revision 2706 - Directory Listing
Modified Sat Sep 3 14:50:15 2011 UTC (6 years, 3 months ago) by mmaechler
people should see the "expm" package when using expm()

Revision 2703 - Directory Listing
Modified Fri Aug 19 07:38:39 2011 UTC (6 years, 3 months ago) by mmaechler
forgotten \alias  + note

Revision 2702 - Directory Listing
Modified Wed Aug 17 16:28:54 2011 UTC (6 years, 4 months ago) by mmaechler
export diagU2N() and diagN2U()

Revision 2688 - Directory Listing
Modified Sat Aug 6 15:33:33 2011 UTC (6 years, 4 months ago) by mmaechler
 "[<-" : now also replTmat calls into Csparse_subassign for large replacement region

Revision 2686 - Directory Listing
Modified Fri Aug 5 21:09:48 2011 UTC (6 years, 4 months ago) by mmaechler
add head(<sparseVector>, n) and tail(..) and use it, removing two FIXME`s

Revision 2684 - Directory Listing
Modified Fri Aug 5 15:17:26 2011 UTC (6 years, 4 months ago) by mmaechler
<Csparse>[..] <- val   now goes via .Call()

Revision 2682 - Directory Listing
Modified Thu Aug 4 10:28:21 2011 UTC (6 years, 4 months ago) by mmaechler
typo

Revision 2680 - Directory Listing
Modified Fri Jul 29 14:34:57 2011 UTC (6 years, 4 months ago) by mmaechler
support 'useRaster' argument for image() methods

Revision 2679 - Directory Listing
Modified Wed Jul 27 17:27:12 2011 UTC (6 years, 4 months ago) by mmaechler
nearPD(*, ensureSymmetry) - allowing a small speedup

Revision 2677 - Directory Listing
Modified Sat Jun 25 19:18:12 2011 UTC (6 years, 5 months ago) by mmaechler
finally a working C level Csparse_subassign() - to solve the memory-explode issue .. *BUT* it`s still too slow, even if I never remove but use drop0(.) in the end ... commit now before South America ... in case I get hit by a truck :-)

Revision 2675 - Directory Listing
Modified Sat Jun 11 15:11:24 2011 UTC (6 years, 6 months ago) by mmaechler
note about using summary() {and write.table()}
for a simplistic  triplet export

Revision 2674 - Directory Listing
Modified Fri Jun 10 21:56:20 2011 UTC (6 years, 6 months ago) by mmaechler
fix <non-constant-Diagonal> %*% <dsCMatrix>

Revision 2672 - Directory Listing
Modified Fri May 20 16:18:25 2011 UTC (6 years, 6 months ago) by mmaechler
"rationalize"/improve description of p slot

Revision 2671 - Directory Listing
Modified Fri May 20 16:17:58 2011 UTC (6 years, 6 months ago) by mmaechler
sparseMatrix(*, symmetric)

Revision 2667 - Directory Listing
Modified Fri Apr 8 15:40:47 2011 UTC (6 years, 8 months ago) by mmaechler
do not even test the "SparseM" example (aargh)

Revision 2665 - Directory Listing
Modified Thu Apr 7 09:46:29 2011 UTC (6 years, 8 months ago) by mmaechler
'SparseM' (0.87) now has its data in a different place

Revision 2661 - Directory Listing
Modified Wed Apr 6 06:55:54 2011 UTC (6 years, 8 months ago) by mmaechler
use standard UFlong (instead of UFlong := int hack); updated CHOLMOD/SparseSuite Jan. -- version 0.9996875-0

Revision 2653 - Directory Listing
Modified Wed Feb 23 14:44:37 2011 UTC (6 years, 9 months ago) by mmaechler
expand(lu(<non-square dense>)) now works

Revision 2652 - Directory Listing
Modified Wed Feb 23 14:03:33 2011 UTC (6 years, 9 months ago) by mmaechler
simple solve(Pmatrix, A) methods

Revision 2648 - Directory Listing
Modified Mon Feb 21 10:57:53 2011 UTC (6 years, 9 months ago) by mmaechler
sparseVector now with *sorted* i-slot

Revision 2644 - Directory Listing
Modified Mon Feb 21 10:57:45 2011 UTC (6 years, 9 months ago) by mmaechler
print/format sparse Matrix: fix align="right" and improve docu

Revision 2638 - Directory Listing
Modified Sat Feb 5 12:19:52 2011 UTC (6 years, 10 months ago) by mmaechler
update, thanks to Spencer Graves' prompting.

Revision 2634 - Directory Listing
Modified Sat Dec 18 16:52:33 2010 UTC (6 years, 11 months ago) by mmaechler
get rid of model.Matrix() {stub to pkg "MatrixModels"}

Revision 2628 - Directory Listing
Modified Sat Dec 11 16:56:51 2010 UTC (7 years ago) by mmaechler
fix <ngCMatrix> %*% <dense> -- providing fast C-based coercions

Revision 2618 - Directory Listing
Modified Sat Sep 11 20:49:41 2010 UTC (7 years, 3 months ago) by mmaechler
misc. (cosmetic) - preparing release

Revision 2616 - Directory Listing
Modified Tue Aug 24 16:15:00 2010 UTC (7 years, 3 months ago) by mmaechler
sparse.model.matrix(): drop.unused.levels = *FALSE* / printSpMatrix() using FormatSpMatrix() and that is modularized

Revision 2612 - Directory Listing
Modified Wed Aug 11 20:33:46 2010 UTC (7 years, 4 months ago) by mmaechler
Schur(<dgCMatrix>) no works

Revision 2610 - Directory Listing
Modified Tue Aug 10 15:10:21 2010 UTC (7 years, 4 months ago) by mmaechler
export & document .bdiag(), too

Revision 2590 - Directory Listing
Modified Wed Jul 28 20:21:55 2010 UTC (7 years, 4 months ago) by mmaechler
add a model.Matrix() "proxy" - for back-compatibility

Revision 2588 - Directory Listing
Modified Mon Jul 26 10:06:18 2010 UTC (7 years, 4 months ago) by mmaechler
new package "MatrixModels" split off Matrix - for modelMatrix(), prediction & response Modules, etc

Revision 2587 - Directory Listing
Modified Sun Jul 25 12:06:27 2010 UTC (7 years, 4 months ago) by mmaechler
typo (missing '\code')

Revision 2586 - Directory Listing
Modified Sun Jul 25 02:32:06 2010 UTC (7 years, 4 months ago) by mmaechler
Copied from: pkg/man revision 2580
move Matrix/ directory "down"

Revision 2580 - Directory Listing
Modified Fri Jul 23 13:15:41 2010 UTC (7 years, 4 months ago) by mmaechler
Original Path: pkg/man
allow "useInv" for rcond(<sparseMatrix>)

Revision 2578 - Directory Listing
Modified Wed Jul 21 14:14:45 2010 UTC (7 years, 4 months ago) by mmaechler
Original Path: pkg/man
typo (thanks to Thomas Rösler)

Revision 2572 - Directory Listing
Modified Sat Jul 17 16:54:41 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
formula(<Model); other minor cleanup

Revision 2569 - Directory Listing
Modified Fri Jul 16 15:04:45 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
IRLS() tweaks; update( <glm4> ); "Model" mother class

Revision 2568 - Directory Listing
Modified Thu Jul 15 15:26:03 2010 UTC (7 years, 5 months ago) by dmbates
Original Path: pkg/man
Simplify IRLS logic, at the cost of somewhat less accurate results

Revision 2567 - Directory Listing
Modified Thu Jul 15 14:35:58 2010 UTC (7 years, 5 months ago) by dmbates
Original Path: pkg/man
Minor spelling mistake

Revision 2566 - Directory Listing
Modified Tue Jul 13 14:22:26 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
IRLS(): more convergence crit. checking.  s/glm1/glm4/

Revision 2565 - Directory Listing
Modified Mon Jul 12 16:32:48 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
"glpModel": docu etc; "CholeskyFactorization"

Revision 2564 - Directory Listing
Modified Fri Jul 9 19:45:42 2010 UTC (7 years, 5 months ago) by dmbates
Original Path: pkg/man
Added examples from example(glm)

Revision 2562 - Directory Listing
Modified Fri Jul 9 14:26:56 2010 UTC (7 years, 5 months ago) by dmbates
Original Path: pkg/man
Remove the defunct 's' argument from the documentation.

Revision 2561 - Directory Listing
Modified Fri Jul 9 13:54:03 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
fix \linkS4class{} typos; add trivial comments, export "lpMod"

Revision 2560 - Directory Listing
Modified Fri Jul 9 13:20:54 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
which(.) now uses arrayInd(.) - as our "FIXME" said

Revision 2557 - Directory Listing
Modified Wed Jul 7 20:43:10 2010 UTC (7 years, 5 months ago) by dmbates
Original Path: pkg/man
Initial version of respModule and predModule; glm1 (hidden) function

Revision 2555 - Directory Listing
Modified Sat Jul 3 11:24:13 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
nearPD(., doSym=FALSE) - changed default

Revision 2554 - Directory Listing
Modified Fri Jul 2 23:10:26 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
nearPD() etc; see ChangeLog

Revision 2553 - Directory Listing
Modified Sat Jun 26 06:50:03 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
fix mean(<sparse with NA>), thanks to Ruth Ripley

Revision 2551 - Directory Listing
Modified Sat Jun 19 20:45:45 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/man
some more coercions; e.g. sparseVector -> sparseMatrix

Revision 2549 - Directory Listing
Modified Tue Jun 8 07:20:55 2010 UTC (7 years, 6 months ago) by mmaechler
Original Path: pkg/man
M [ <lMatrix> ]  <- value  now works

Revision 2548 - Directory Listing
Modified Fri Jun 4 15:55:22 2010 UTC (7 years, 6 months ago) by mmaechler
Original Path: pkg/man
sparseMatrix(*, dimnames=.) should work (again!)

Revision 2546 - Directory Listing
Modified Wed Jun 2 09:48:52 2010 UTC (7 years, 6 months ago) by mmaechler
Original Path: pkg/man
doc for new model.Matrix() (forgotten in rev 2544)

Revision 2545 - Directory Listing
Modified Wed Jun 2 09:48:05 2010 UTC (7 years, 6 months ago) by mmaechler
Original Path: pkg/man
doc for new class (forgotten in rev 2544)

Revision 2544 - Directory Listing
Modified Wed Jun 2 09:29:01 2010 UTC (7 years, 6 months ago) by mmaechler
Original Path: pkg/man
new model.Matrix(), sparse.model.matrix() return "modelMatrix" class

Revision 2539 - Directory Listing
Modified Sat May 15 19:50:45 2010 UTC (7 years, 7 months ago) by mmaechler
Original Path: pkg/man
fix <sparseMatrix>[] <- value

Revision 2534 - Directory Listing
Modified Sat May 1 21:39:29 2010 UTC (7 years, 7 months ago) by mmaechler
Original Path: pkg/man
update condest() help page + cosmetic

Revision 2533 - Directory Listing
Modified Sat May 1 20:54:31 2010 UTC (7 years, 7 months ago) by mmaechler
Original Path: pkg/man
missing "}"

Revision 2532 - Directory Listing
Modified Sat May 1 20:49:55 2010 UTC (7 years, 7 months ago) by mmaechler
Original Path: pkg/man
new condest(), onenormest(); a bit more "pMatrix" methods

Revision 2529 - Directory Listing
Modified Wed Mar 31 14:41:33 2010 UTC (7 years, 8 months ago) by mmaechler
Original Path: pkg/man
lm.fit.sparse(x,y, w, *) (+ weights!) etc

Revision 2527 - Directory Listing
Modified Tue Mar 30 17:22:44 2010 UTC (7 years, 8 months ago) by mmaechler
Original Path: pkg/man
enable sparse.model.matrix( ~ 1)

Revision 2526 - Directory Listing
Modified Sat Mar 27 11:08:43 2010 UTC (7 years, 8 months ago) by mmaechler
Original Path: pkg/man
which() methods + checks; small things

Revision 2525 - Directory Listing
Modified Wed Mar 24 11:15:01 2010 UTC (7 years, 8 months ago) by mmaechler
Original Path: pkg/man
M[ij] indexing now works with non-integer numeric ij and checks better; other changes, see ChangeLog

Revision 2523 - Directory Listing
Modified Wed Mar 3 07:42:37 2010 UTC (7 years, 9 months ago) by mmaechler
Original Path: pkg/man
fixing two []-buglets; rep2abI()

Revision 2522 - Directory Listing
Modified Mon Mar 1 21:18:27 2010 UTC (7 years, 9 months ago) by mmaechler
Original Path: pkg/man
export + doc rep2abI()

Revision 2521 - Directory Listing
Modified Fri Feb 12 15:32:03 2010 UTC (7 years, 10 months ago) by mmaechler
Original Path: pkg/man
solve(<dtrMatrix>, *) for <Cholesky> in lme4

Revision 2520 - Directory Listing
Modified Fri Feb 12 10:51:37 2010 UTC (7 years, 10 months ago) by mmaechler
Original Path: pkg/man
det(): export regularly (with "masking warning") instead of base namespace hack

Revision 2514 - Directory Listing
Modified Sat Jan 23 22:18:53 2010 UTC (7 years, 10 months ago) by mmaechler
Original Path: pkg/man
nnzero() is generic; det[erminant]() cosmetic

Revision 2513 - Directory Listing
Modified Tue Jan 19 17:50:15 2010 UTC (7 years, 10 months ago) by mmaechler
Original Path: pkg/man
get rid of new R-devel "note/warning"

Revision 2512 - Directory Listing
Modified Mon Jan 18 17:05:35 2010 UTC (7 years, 10 months ago) by mmaechler
Original Path: pkg/man
Matrix`s own contr.poly() had an infelicitous default

Revision 2508 - Directory Listing
Modified Thu Dec 24 09:47:57 2009 UTC (7 years, 11 months ago) by mmaechler
Original Path: pkg/man
Use Matrix-multiplication for sparse "[" for now

Revision 2507 - Directory Listing
Modified Tue Dec 22 21:11:49 2009 UTC (7 years, 11 months ago) by mmaechler
Original Path: pkg/man
many "abIndex" methods and tests ++ see ChangeLog

Revision 2503 - Directory Listing
Modified Sun Dec 6 19:40:51 2009 UTC (8 years ago) by mmaechler
Original Path: pkg/man
implement missing sparseVector "Ops"

Revision 2501 - Directory Listing
Modified Tue Dec 1 18:42:27 2009 UTC (8 years ago) by dmbates
Original Path: pkg/man
Documentation error detected by Stefanie Kalus

Revision 2500 - Directory Listing
Modified Fri Nov 20 13:22:17 2009 UTC (8 years ago) by mmaechler
Original Path: pkg/man
<sparseVector>  method improvements

Revision 2497 - Directory Listing
Modified Sat Nov 14 21:36:25 2009 UTC (8 years, 1 month ago) by mmaechler
Original Path: pkg/man
put "abIndex" class in, even if very unfinished;
otherwise, too many changed files get in my way

Revision 2490 - Directory Listing
Modified Sat Oct 24 20:40:09 2009 UTC (8 years, 1 month ago) by mmaechler
Original Path: pkg/man
checkMatrix() does crossprod() now; also see ChangeLog

Revision 2482 - Directory Listing
Modified Wed Sep 30 09:37:15 2009 UTC (8 years, 2 months ago) by mmaechler
Original Path: pkg/man
fix infinite recursion for image(), solve() with ddiMatrix

Revision 2476 - Directory Listing
Modified Wed Sep 23 12:09:07 2009 UTC (8 years, 2 months ago) by mmaechler
Original Path: pkg/man
more "Ops" definitions and systematically check them

Revision 2472 - Directory Listing
Modified Sat Sep 19 06:10:48 2009 UTC (8 years, 2 months ago) by mmaechler
Original Path: pkg/man
solve(<CHMfactor>); more chol2inv(); more methods against "disambiguity" notes, notably "[" ones, including a buglet fix

Revision 2470 - Directory Listing
Modified Thu Sep 17 21:16:19 2009 UTC (8 years, 2 months ago) by mmaechler
Original Path: pkg/man
mention extraneous arguments ("R CMD check")

Revision 2469 - Directory Listing
Modified Thu Sep 17 21:09:10 2009 UTC (8 years, 2 months ago) by mmaechler
Original Path: pkg/man
docu + example for chol2inv()

Revision 2466 - Directory Listing
Modified Fri Sep 11 23:23:38 2009 UTC (8 years, 3 months ago) by mmaechler
Original Path: pkg/man
fix some  \link[..]{}s as found via R-devel

Revision 2465 - Directory Listing
Modified Fri Sep 11 22:49:33 2009 UTC (8 years, 3 months ago) by mmaechler
Original Path: pkg/man
sparseVector Ops; printing "non-structural FALSE" in logical sparseMatrix; more use of paste0()

Revision 2463 - Directory Listing
Modified Wed Sep 2 12:45:57 2009 UTC (8 years, 3 months ago) by mmaechler
Original Path: pkg/man
determinant(<CHMfactor>) now does return  det( "L" )

Revision 2454 - Directory Listing
Modified Fri Aug 28 14:36:21 2009 UTC (8 years, 3 months ago) by mmaechler
Original Path: pkg/man
{Aug.21:} improve sparse-awareness of `contrasts<-`

Revision 2445 - Directory Listing
Modified Mon Jul 27 13:38:31 2009 UTC (8 years, 4 months ago) by mmaechler
Original Path: pkg/man
sparse.model.matrix() rewrite and tests

Revision 2443 - Directory Listing
Modified Mon Jul 20 21:01:01 2009 UTC (8 years, 4 months ago) by mmaechler
Original Path: pkg/man
Cholesky() methods doc - belongs to r2442

Revision 2439 - Directory Listing
Modified Sat Jul 18 16:03:36 2009 UTC (8 years, 4 months ago) by mmaechler
Original Path: pkg/man
Cholesky(*, super = NA): fix "factors" caching

Revision 2422 - Directory Listing
Modified Sat Jul 11 20:36:10 2009 UTC (8 years, 5 months ago) by mmaechler
Original Path: pkg/man
export isLDL, test it; small fixes WRT contr.*(., sparse) 

Revision 2415 - Directory Listing
Modified Thu Jul 9 07:51:05 2009 UTC (8 years, 5 months ago) by mmaechler
Original Path: pkg/man
export (& doc) sparse.model.matrix()

Revision 2413 - Directory Listing
Modified Mon Jun 29 16:25:29 2009 UTC (8 years, 5 months ago) by mmaechler
Original Path: pkg/man
explain inconsistency in determinant(<CHMfactor>) and determinant(<Cholesky>)

Revision 2394 - Directory Listing
Modified Sat Jun 6 21:45:37 2009 UTC (8 years, 6 months ago) by mmaechler
Original Path: pkg/man
kronecker( <numeric> )

Revision 2386 - Directory Listing
Modified Wed May 27 20:54:45 2009 UTC (8 years, 6 months ago) by mmaechler
Original Path: pkg/man
remove extraneous slots in some *-class.Rd files

Revision 2380 - Directory Listing
Modified Mon May 25 09:45:37 2009 UTC (8 years, 6 months ago) by mmaechler
Original Path: pkg/man
move %*%, [t]crossprod() methods to own file products.R; + "sparseVector" methods

Revision 2377 - Directory Listing
Modified Wed May 20 06:55:22 2009 UTC (8 years, 6 months ago) by mmaechler
Original Path: pkg/man
1-letter typo

Revision 2374 - Directory Listing
Modified Mon May 18 14:40:09 2009 UTC (8 years, 7 months ago) by mmaechler
Original Path: pkg/man
new rankMatrix()

Revision 2363 - Directory Listing
Modified Thu Apr 9 20:45:32 2009 UTC (8 years, 8 months ago) by mmaechler
Original Path: pkg/man
as(., "vector"); M[i, drop=<LOGI>] vector-indexing; fix (& check) rare problem in <TsparseTriangular[i,]; some cosmetics

Revision 2362 - Directory Listing
Modified Tue Apr 7 09:44:11 2009 UTC (8 years, 8 months ago) by mmaechler
Original Path: pkg/man
sparseVector (part 2)

Revision 2361 - Directory Listing
Modified Tue Apr 7 09:20:19 2009 UTC (8 years, 8 months ago) by mmaechler
Original Path: pkg/man
lu() "part 2"; sparseVector

Revision 2360 - Directory Listing
Modified Tue Apr 7 07:55:03 2009 UTC (8 years, 8 months ago) by mmaechler
Original Path: pkg/man
lu(*, warnSing)

Revision 2349 - Directory Listing
Modified Wed Mar 25 10:22:28 2009 UTC (8 years, 8 months ago) by mmaechler
Original Path: pkg/man
drop FIXME; add example

Revision 2347 - Directory Listing
Modified Thu Mar 12 10:44:50 2009 UTC (8 years, 9 months ago) by mmaechler
Original Path: pkg/man
see also  bandSparse()

Revision 2346 - Directory Listing
Modified Thu Mar 12 10:40:52 2009 UTC (8 years, 9 months ago) by mmaechler
Original Path: pkg/man
band(x, .,.) fixes, notably for dense x

Revision 2342 - Directory Listing
Modified Tue Mar 3 09:26:38 2009 UTC (8 years, 9 months ago) by mmaechler
Original Path: pkg/man
comment \Rdversion{}:  gives warning in R 2.8.1

Revision 2341 - Directory Listing
Modified Mon Mar 2 17:53:13 2009 UTC (8 years, 9 months ago) by mmaechler
Original Path: pkg/man
misc.cleanup; mostly related to "all NA sparse mat."; see ChangeLog

Revision 2340 - Directory Listing
Modified Mon Mar 2 17:52:35 2009 UTC (8 years, 9 months ago) by mmaechler
Original Path: pkg/man
new function bandSparse()

Revision 2338 - Directory Listing
Modified Fri Feb 13 16:08:32 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/man
add sh-script for dropping SPQR parts

Revision 2333 - Directory Listing
Modified Fri Jan 30 23:09:44 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/man
ready to release *-20; do not call spqr() on Windows; minor coercion changes, notably for "pMatrix", see ChangeLog

Revision 2331 - Directory Listing
Modified Thu Jan 29 15:13:15 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/man
more diagMatrix arithmetic ops for new method-dispatch

Revision 2328 - Directory Listing
Modified Wed Jan 28 10:29:13 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/man
fix \link{}s

Revision 2327 - Directory Listing
Modified Wed Jan 28 08:46:07 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/man
miscellaneous; some relating to SPQR

Revision 2326 - Directory Listing
Modified Wed Jan 28 08:43:40 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/man
spqr()  |-> "SPQR" class

Revision 2321 - Directory Listing
Modified Tue Jan 20 08:44:45 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/man
typos in sparseMatrix.Rd; ..

Revision 2318 - Directory Listing
Modified Sat Jan 17 20:11:18 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/man
sparseMatrix() tweaks [index1 = TRUE]

Revision 2317 - Directory Listing
Modified Fri Jan 16 17:42:58 2009 UTC (8 years, 11 months ago) by mmaechler
Original Path: pkg/man
merge some of my version; also extending the examples

Revision 2314 - Directory Listing
Modified Mon Jan 12 22:28:15 2009 UTC (8 years, 11 months ago) by dmbates
Original Path: pkg/man
New help page

Revision 2312 - Directory Listing
Modified Sat Jan 10 14:01:26 2009 UTC (8 years, 11 months ago) by mmaechler
Original Path: pkg/man
new sparseMatrix(): construct *sorted* Csparse from un-sorted input, using modify-in-place under the hood

Revision 2311 - Directory Listing
Modified Tue Jan 6 14:56:04 2009 UTC (8 years, 11 months ago) by mmaechler
Original Path: pkg/man
small glitches caught by Rd_parse

Revision 2305 - Directory Listing
Modified Sun Oct 26 17:08:30 2008 UTC (9 years, 1 month ago) by dmbates
Original Path: pkg/man
Adjust tests and examples for new behavior on unsorted columns

Revision 2270 - Directory Listing
Modified Tue Sep 23 09:52:19 2008 UTC (9 years, 2 months ago) by mmaechler
Original Path: pkg/man
fix typos

Revision 2268 - Directory Listing
Modified Mon Sep 22 15:17:12 2008 UTC (9 years, 2 months ago) by mmaechler
Original Path: pkg/man
less TODOs; notably coercion -> [dln]Matrix; diagonal arithmetic

Revision 2259 - Directory Listing
Modified Wed Sep 10 07:33:45 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/man
doc updates for diagonalMatrix

Revision 2256 - Directory Listing
Modified Fri Sep 5 16:23:39 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/man
drop0(., tol); <Matrix,ANY> changes from JMC; diagU2N()

Revision 2255 - Directory Listing
Modified Sat Aug 30 07:20:33 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/man
all.equal()  TRUE only if e.g. classes match

Revision 2254 - Directory Listing
Modified Thu Aug 28 15:14:08 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/man
tweak example

Revision 2253 - Directory Listing
Modified Thu Aug 28 13:15:55 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/man
add NA-factor example

Revision 2248 - Directory Listing
Modified Tue Aug 26 15:34:16 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/man
also adapt help file about lu() change

Revision 2245 - Directory Listing
Modified Mon Aug 25 15:06:12 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/man
all.equal() methods; expand(<sparseLU>)

Revision 2243 - Directory Listing
Modified Sat Aug 23 17:59:26 2008 UTC (9 years, 3 months ago) by dmbates
Original Path: pkg/man
Added expand method and documentation for CHMfactor class

Revision 2242 - Directory Listing
Modified Thu Aug 21 20:51:40 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/man
misc from last week; notably "large" sparseVector`s

Revision 2239 - Directory Listing
Modified Mon Jul 28 19:26:40 2008 UTC (9 years, 4 months ago) by mmaechler
Original Path: pkg/man
make diagonalMatrix extend sparseM* instead dense*; dgCMatrix_qrsol(.,., order) {in hidden lm.fit.sparse()}

Revision 2237 - Directory Listing
Modified Fri Jul 25 06:55:42 2008 UTC (9 years, 4 months ago) by mmaechler
Original Path: pkg/man
two more solve() cases; tweaks related to diagMatrix

Revision 2236 - Directory Listing
Modified Wed Jul 23 16:48:14 2008 UTC (9 years, 4 months ago) by mmaechler
Original Path: pkg/man
more validObject() checks, and fixes for "over-allocated" i- and x-slots

Revision 2229 - Directory Listing
Modified Tue Jul 22 08:35:24 2008 UTC (9 years, 4 months ago) by mmaechler
Original Path: pkg/man
mention zapsmall() & give example

Revision 2223 - Directory Listing
Modified Fri Jul 18 23:04:48 2008 UTC (9 years, 4 months ago) by mmaechler
Original Path: pkg/man
build sparse_diagU2N() into functions underlying AS_CHM_*()

Revision 2213 - Directory Listing
Modified Thu Jul 17 16:56:09 2008 UTC (9 years, 5 months ago) by mmaechler
Original Path: pkg/man
typo ("non-number" :-\ )

Revision 2210 - Directory Listing
Modified Wed Jul 16 22:20:22 2008 UTC (9 years, 5 months ago) by dmbates
Original Path: pkg/man
Remove vestigial methods based on the parent array; new solve method for signature(a = "dtCMatrix", b = "sparseMatrix")

Revision 2209 - Directory Listing
Modified Mon Jul 14 19:39:39 2008 UTC (9 years, 5 months ago) by mmaechler
Original Path: pkg/man
bdiag() improvements of last week

Revision 2207 - Directory Listing
Modified Mon Jul 7 22:34:52 2008 UTC (9 years, 5 months ago) by mmaechler
Original Path: pkg/man
M[...] <- "sparseVector" etc, see ChangeLog

Revision 2206 - Directory Listing
Modified Wed Jun 25 14:57:02 2008 UTC (9 years, 5 months ago) by mmaechler
Original Path: pkg/man
bdiag(): use Doug`s better algorithm, fix "bugs"

Revision 2205 - Directory Listing
Modified Tue Jun 17 16:15:20 2008 UTC (9 years, 6 months ago) by mmaechler
Original Path: pkg/man
rm old option of using "l" or "u" in uplo-slot

Revision 2203 - Directory Listing
Modified Sat Jun 14 20:09:17 2008 UTC (9 years, 6 months ago) by mmaechler
Original Path: pkg/man
C based encodeInd() -> faster indexing; any()/all() for nsparse; printSpMatrix2(); show(<diag>)

Revision 2199 - Directory Listing
Modified Mon Jun 2 16:09:12 2008 UTC (9 years, 6 months ago) by mmaechler
Original Path: pkg/man
changes related to 2197; also one small step at reducing the ambiguity warnings

Revision 2196 - Directory Listing
Modified Fri May 30 21:49:50 2008 UTC (9 years, 6 months ago) by mmaechler
Original Path: pkg/man
Ops methods for <diag> o <dMatrix>

Revision 2193 - Directory Listing
Modified Mon May 5 06:56:21 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
less TODO; more "Done"

Revision 2191 - Directory Listing
Modified Wed Apr 30 06:32:09 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
add missing \alias{} for group method and other methods that 2.7.0 did not show missing

Revision 2190 - Directory Listing
Modified Mon Apr 28 16:24:15 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
cholMat(); update dpo coercion tests

Revision 2185 - Directory Listing
Modified Sat Apr 26 20:33:16 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
more <Ops> methods, notably for lMatrix & nMatrix

Revision 2184 - Directory Listing
Modified Sat Apr 26 20:32:39 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
define image()-methods on higher level [ln]sparseMatrix

Revision 2183 - Directory Listing
Modified Thu Apr 24 10:58:51 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
slight change in class-definition of [d]diMatrix; better pos.definite checks for dpo* and dpp*

Revision 2182 - Directory Listing
Modified Thu Apr 24 10:57:08 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
expm() methods for diagonal/triangular/symmetric

Revision 2177 - Directory Listing
Modified Thu Apr 24 06:30:21 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
Diagonal() in example

Revision 2175 - Directory Listing
Modified Wed Apr 23 11:23:50 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/man
more determinant(); MANY consistency cleanups, found by checkMatrix(); .. (see ChangeLog)

Revision 2168 - Directory Listing
Modified Mon Apr 14 10:41:14 2008 UTC (9 years, 8 months ago) by mmaechler
Original Path: pkg/man
new image() method: do *not* use abs(.) by default, but colors

Revision 2163 - Directory Listing
Modified Sat Mar 29 14:45:18 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
evade newest CMD check warnings

Revision 2161 - Directory Listing
Modified Sat Mar 29 14:08:25 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
make work with 2.7.0 version that do not have rcond

Revision 2158 - Directory Listing
Modified Fri Mar 28 17:07:54 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
rcond(., norm) instead of (., type)

Revision 2157 - Directory Listing
Modified Tue Mar 25 15:00:01 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
BunchKaufman(); fix <ddi> o <numeric> bug; Version++

Revision 2154 - Directory Listing
Modified Sat Mar 22 21:23:12 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
no longer use "non-standard" chol() and qr() generic

Revision 2152 - Directory Listing
Modified Sat Mar 22 16:09:05 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
helpfile from last millennium or so

Revision 2151 - Directory Listing
Modified Thu Mar 20 23:31:22 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
several cosmetics

Revision 2150 - Directory Listing
Modified Thu Mar 20 23:30:10 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
add two spatial sparse examples from Roger Bivand

Revision 2149 - Directory Listing
Modified Thu Mar 20 23:29:09 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/man
oops; forgotten to svn add / commit, about a week ago

Revision 2145 - Directory Listing
Modified Wed Mar 19 14:00:47 2008 UTC (9 years, 8 months ago) by bates
Original Path: pkg/man
Add Imult argument to Cholesky

Revision 2144 - Directory Listing
Modified Tue Mar 18 23:08:12 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/man
.symDiagonal(), is.na() and more diagonalMatrix "Ops"

Revision 2142 - Directory Listing
Modified Tue Mar 18 15:02:23 2008 UTC (9 years, 9 months ago) by bates
Original Path: pkg/man
update method for CHMfactor; change return type of exported C function chm_factor_update

Revision 2137 - Directory Listing
Modified Mon Mar 17 22:21:24 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/man
my fast determinant(<dsC..>) versions

Revision 2136 - Directory Listing
Modified Mon Mar 17 22:20:29 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/man
more methods for subclasses, against "ambiguity" warnings

Revision 2134 - Directory Listing
Modified Mon Mar 17 18:53:43 2008 UTC (9 years, 9 months ago) by bates
Original Path: pkg/man
Log-determinant of the parent matrix from a CHMfactor object as chm_factor_ldetL2; documentation and support

Revision 2130 - Directory Listing
Modified Fri Mar 14 19:27:16 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/man
back-compatibility: as(., "dsCMatrix") with one warning per session

Revision 2128 - Directory Listing
Modified Thu Mar 13 23:08:34 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/man
fix diagonal <-> sparse  buglets

Revision 2115 - Directory Listing
Modified Sat Feb 23 09:23:17 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/man
+ forceSymmetric(); generalize ddense_to_symmetric to dense_to_s.. and ddense_band to dense_band allowing simplified methods;  Matrix() and many man/*Rd : replace many as(*, <specific>) by as(*, <virtual superclass>)

Revision 2113 - Directory Listing
Modified Mon Feb 18 08:27:41 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/man
miscellaneous cleanup; typically indexing and coercion

Revision 2112 - Directory Listing
Modified Mon Feb 18 08:24:46 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/man
new symmpart(), skewpart()

Revision 2110 - Directory Listing
Modified Sat Jan 26 20:59:26 2008 UTC (9 years, 10 months ago) by maechler
Original Path: pkg/man
more indexing/subassignment & testing those

Revision 2107 - Directory Listing
Modified Fri Jan 25 10:39:25 2008 UTC (9 years, 10 months ago) by maechler
Original Path: pkg/man
forgotten "svn add" for r4904 (Schur class etc)

Revision 2106 - Directory Listing
Modified Wed Jan 23 09:36:04 2008 UTC (9 years, 10 months ago) by maechler
Original Path: pkg/man
+ "Schur" class and many more Schur methods

Revision 2105 - Directory Listing
Modified Tue Jan 15 10:16:29 2008 UTC (9 years, 11 months ago) by maechler
Original Path: pkg/man
solve(<CHMfactor>, <numeric>) and related

Revision 2103 - Directory Listing
Modified Fri Jan 11 22:39:21 2008 UTC (9 years, 11 months ago) by maechler
Original Path: pkg/man
update on rcond()

Revision 2098 - Directory Listing
Modified Sun Dec 9 00:35:14 2007 UTC (10 years ago) by maechler
Original Path: pkg/man
indexing M[i], for *vector* i; and tests for those, see ChangeLog

Revision 2096 - Directory Listing
Modified Fri Dec 7 17:44:44 2007 UTC (10 years ago) by maechler
Original Path: pkg/man
+ cov2cor(); updates to nearPD()+doc; others

Revision 2095 - Directory Listing
Modified Wed Dec 5 17:57:24 2007 UTC (10 years ago) by maechler
Original Path: pkg/man
s/sxtabs/xtabs/ + fix + doc(incl example)

Revision 2082 - Directory Listing
Modified Sat Oct 6 22:09:19 2007 UTC (10 years, 2 months ago) by maechler
Original Path: pkg/man
harmless typo

Revision 2081 - Directory Listing
Modified Sat Oct 6 22:01:45 2007 UTC (10 years, 2 months ago) by maechler
Original Path: pkg/man
some more dense solve() / lu()

Revision 2072 - Directory Listing
Modified Wed Sep 26 16:16:13 2007 UTC (10 years, 2 months ago) by maechler
Original Path: pkg/man
rcond() and qr.R() - unfinished (need TESTING; see FIXME)

Revision 2067 - Directory Listing
Modified Wed Sep 12 14:35:36 2007 UTC (10 years, 3 months ago) by maechler
Original Path: pkg/man
document chol() and qr() S4 generic; move all chol() method docs to chol.Rd

Revision 2066 - Directory Listing
Modified Wed Sep 12 12:51:19 2007 UTC (10 years, 3 months ago) by maechler
Original Path: pkg/man
add to example

Revision 2064 - Directory Listing
Modified Tue Sep 11 21:23:13 2007 UTC (10 years, 3 months ago) by bates
Original Path: pkg/man
Code used dgees but docs said dgeesx.

Revision 2062 - Directory Listing
Modified Sat Sep 1 21:06:52 2007 UTC (10 years, 3 months ago) by maechler
Original Path: pkg/man
more  [<- (i=missing,j=ANY, value=Matrix) etc

Revision 2055 - Directory Listing
Modified Thu Aug 16 15:48:27 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
minor update

Revision 2049 - Directory Listing
Modified Tue Aug 14 22:22:24 2007 UTC (10 years, 4 months ago) by bates
Original Path: pkg/man
Remove deprecated function writeHB and its methods; switch writeMM to use CHOLMOD code; repair readMM

Revision 2048 - Directory Listing
Modified Tue Aug 14 15:09:10 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
new nearPD() {from Jens` nearcor()}; some TODO cleanup

Revision 2043 - Directory Listing
Modified Sat Aug 11 03:18:26 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
image() new defaults + docs; misc

Revision 2039 - Directory Listing
Modified Mon Aug 6 18:49:27 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
solve, %*% etc and correct test

Revision 2036 - Directory Listing
Modified Mon Aug 6 12:03:47 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
add more x

Revision 2023 - Directory Listing
Modified Wed Aug 1 20:26:21 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
+ missing \alias{..}

Revision 2018 - Directory Listing
Modified Wed Aug 1 15:22:05 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
fix <dge> %*% <dtr> + misc.cosmetics

Revision 2017 - Directory Listing
Modified Wed Aug 1 15:18:25 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
mention a few times that people should typically rather use  chol(.)

Revision 2015 - Directory Listing
Modified Wed Jul 25 14:17:24 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/man
(mostly) patches from Brian re potential changes in R-devel

Revision 2005 - Directory Listing
Modified Wed Jul 18 14:46:20 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/man
norm() for sparse; systematic checking of norm() and all "Summary" methods

Revision 1968 - Directory Listing
Modified Sat Jul 7 22:49:12 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/man
Rsparse validation methods; finally make use of slot_dup() macro; fix R_to_C (symmetric)

Revision 1948 - Directory Listing
Modified Thu Jul 5 08:42:05 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/man
yet another example

Revision 1947 - Directory Listing
Modified Thu Jul 5 08:22:00 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/man
printSpMatrix() {exported, extended, documented}

Revision 1932 - Directory Listing
Modified Fri Jun 29 16:43:47 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/man
Math/Math2: setGeneric adaption for todays` R-devel

Revision 1922 - Directory Listing
Modified Sat Jun 23 18:08:48 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/man
xsparseVector etc (smarter coercions)

Revision 1911 - Directory Listing
Modified Tue Jun 19 16:16:58 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/man
colSums, ... rowMeans for all Matrices; notably sparse ones via [diln]gCMatrix_colSums C code

Revision 1903 - Directory Listing
Modified Sat Jun 16 18:31:51 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
+ print(<sparse>, extra args)

Revision 1900 - Directory Listing
Modified Sat Jun 16 11:54:40 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
add qr() based LS example, comparing solution with Chol() one.

Revision 1898 - Directory Listing
Modified Fri Jun 15 23:13:43 2007 UTC (10 years, 6 months ago) by bates
Original Path: pkg/man
Don't need an interactions class.  Use the row names to store the levels - duh

Revision 1896 - Directory Listing
Modified Fri Jun 15 18:20:26 2007 UTC (10 years, 6 months ago) by bates
Original Path: pkg/man
draft "indicators" class

Revision 1895 - Directory Listing
Modified Fri Jun 15 18:19:23 2007 UTC (10 years, 6 months ago) by bates
Original Path: pkg/man
added lm.fit.sparse (unexported), coercion of "factor" to dgCMatrix and dgCMatrix_cholsol

Revision 1893 - Directory Listing
Modified Thu Jun 14 10:46:10 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
more strict validity checking for Csparse

Revision 1887 - Directory Listing
Modified Thu Jun 7 09:04:34 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
few misc.

Revision 1885 - Directory Listing
Modified Thu Jun 7 08:54:16 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
+ another kronecker method [against infinite recursion]

Revision 1883 - Directory Listing
Modified Wed Jun 6 14:24:58 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
use correct "na.rm" default in all() and any(); tests for that

Revision 1872 - Directory Listing
Modified Tue Jun 5 16:32:04 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
+ example

Revision 1855 - Directory Listing
Modified Wed May 23 21:33:34 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
export drop0() {name is open for discussion}; document colSums

Revision 1852 - Directory Listing
Modified Mon May 21 16:42:35 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/man
sparseVector. <- v; rowSums/colSums; summary(<sparse>); spMatrix(.) utility

Revision 1845 - Directory Listing
Modified Wed May 16 21:24:41 2007 UTC (10 years, 7 months ago) by maechler
Original Path: pkg/man
part of sparseVector additions; in order to avoid merge conflicts

Revision 1844 - Directory Listing
Modified Wed May 16 20:40:34 2007 UTC (10 years, 7 months ago) by bates
Original Path: pkg/man
Added solve methods for CHMfactor class

Revision 1838 - Directory Listing
Modified Tue May 15 10:33:37 2007 UTC (10 years, 7 months ago) by maechler
Original Path: pkg/man
extraneous "}" found by new R-devel checks

Revision 1829 - Directory Listing
Modified Thu Apr 26 06:35:20 2007 UTC (10 years, 7 months ago) by maechler
Original Path: pkg/man
update; mostly for ("[", Tsparse..)"

Revision 1825 - Directory Listing
Modified Thu Apr 12 13:21:51 2007 UTC (10 years, 8 months ago) by maechler
Original Path: pkg/man
kronecker() rationalization; more setAs(), notably to virtual classes and tT <-> gT

Revision 1806 - Directory Listing
Modified Tue Mar 27 16:46:29 2007 UTC (10 years, 8 months ago) by maechler
Original Path: pkg/man
first cut at new page __ FIXME

Revision 1799 - Directory Listing
Modified Sat Mar 24 14:54:00 2007 UTC (10 years, 8 months ago) by maechler
Original Path: pkg/man
+ diff(.), + "dim<-";  cBind/rBind + cbind/rbind; indexing fixes - current state

Revision 1791 - Directory Listing
Modified Sat Feb 24 16:59:07 2007 UTC (10 years, 9 months ago) by bates
Original Path: pkg/man
Add information on 0-based permutation

Revision 1786 - Directory Listing
Modified Fri Feb 16 17:37:56 2007 UTC (10 years, 10 months ago) by bates
Original Path: pkg/man
Add image method for CHMfactor class

Revision 1767 - Directory Listing
Modified Mon Feb 5 16:53:17 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/man
eliminate infinite loop in coercions to [ln]sparseMatrix

Revision 1765 - Directory Listing
Modified Mon Feb 5 16:32:04 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/man
more Matrix <-> SparseM

Revision 1760 - Directory Listing
Modified Sat Feb 3 21:13:22 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/man
Rsparse coercions now all via R-level "workaround"; to and from  *virtual* rather than specific classes

Revision 1751 - Directory Listing
Modified Tue Jan 30 17:41:02 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/man
drop(); tweaks to Ops & indexing; Rsparse coercions for less exceptions in tests/Class+Meth.R

Revision 1748 - Directory Listing
Modified Mon Jan 29 20:48:26 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/man
solve(<diagMatrix>)

Revision 1747 - Directory Listing
Modified Mon Jan 29 20:17:33 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/man
many more coercions for diag(), "!", etc; see ChangeLog

Revision 1738 - Directory Listing
Modified Tue Jan 23 17:17:15 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/man
nnzero(), length(), "Ops" & "Logic", many more setAs(); misc.fixes

Revision 1737 - Directory Listing
Modified Tue Jan 23 17:14:20 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/man
much faster "fancy" adjust in show()

Revision 1725 - Directory Listing
Modified Wed Jan 17 08:01:10 2007 UTC (10 years, 11 months ago) by maechler
Original Path: pkg/man
accomplished quite a few small FIXMEs; see ChangeLog

Revision 1724 - Directory Listing
Modified Sat Jan 13 21:06:51 2007 UTC (10 years, 11 months ago) by maechler
Original Path: pkg/man
indexing etc till yesterday

Revision 1714 - Directory Listing
Modified Thu Dec 28 22:11:32 2006 UTC (10 years, 11 months ago) by maechler
Original Path: pkg/man
move Ops to new Ops.R; start using "Logic"

Revision 1710 - Directory Listing
Modified Tue Dec 26 15:57:06 2006 UTC (10 years, 11 months ago) by maechler
Original Path: pkg/man
more "[<-" fixes; validity of triangular sparse

Revision 1708 - Directory Listing
Modified Fri Dec 22 19:53:37 2006 UTC (10 years, 11 months ago) by maechler
Original Path: pkg/man
rbind2() / cbind2() methods fixes + new Auxiliaries

Revision 1707 - Directory Listing
Modified Thu Dec 21 08:03:05 2006 UTC (10 years, 11 months ago) by maechler
Original Path: pkg/man
fix last (? ha!) indexing bug; cbind2/rbind2

Revision 1705 - Directory Listing
Modified Sat Dec 16 12:37:25 2006 UTC (11 years ago) by maechler
Original Path: pkg/man
any(), all() and "Compare"(<sparse>) - for release of 0.9975-7

Revision 1696 - Directory Listing
Modified Mon Dec 11 21:41:37 2006 UTC (11 years ago) by maechler
Original Path: pkg/man
fix symmetric-sparse-indexing bug

Revision 1687 - Directory Listing
Modified Tue Dec 5 13:37:13 2006 UTC (11 years ago) by maechler
Original Path: pkg/man
3 mini updates

Revision 1673 - Directory Listing
Modified Mon Nov 6 20:54:26 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/man
host of changes; mostly indexing(sub-set & -assign) for symmetric and [ cbind(i,j) ]

Revision 1665 - Directory Listing
Modified Fri Nov 3 23:18:07 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/man
fully-sparse solve() for dsC; indexing & comparison fixes

Revision 1660 - Directory Listing
Modified Thu Nov 2 11:05:35 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/man
tcrossprod(<Csp>, <Csp>); dimnames for [t]crossprod; validity now ensures correct length(Dimnames[[j]])

Revision 1659 - Directory Listing
Modified Wed Nov 1 17:50:15 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/man
extend Csparse_Csparse_crossprod for tcrossprod (need test!); isSymmetric improved; misc.

Revision 1657 - Directory Listing
Modified Wed Nov 1 16:29:53 2006 UTC (11 years, 1 month ago) by bates
Original Path: pkg/man
crossprod(<CsparseMatrix>,<CsparseMatrix>) added

Revision 1655 - Directory Listing
Modified Mon Oct 30 17:16:27 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/man
another set of fixes/improvements; the last prompted by Harri Kiiveri

Revision 1654 - Directory Listing
Modified Fri Oct 27 16:58:15 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/man
miscellaneous "fixes" mostly in ChangeLog and/or related to diagonalMatrix

Revision 1642 - Directory Listing
Modified Fri Oct 20 21:08:28 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/man
small changes related to "corMatrix" and other newly seen classes in tests/Class+Meth.R

Revision 1620 - Directory Listing
Modified Sat Oct 7 12:48:05 2006 UTC (11 years, 2 months ago) by bates
Original Path: pkg/man
deprecate writeHB in favor of writeMM

Revision 1618 - Directory Listing
Modified Fri Oct 6 15:44:01 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/man
Matrix(0, d,d) should also give sparse (not diagonal); general_to_symmetric; notably for lsC*; more coercions; first cut at Csparse_drop()

Revision 1617 - Directory Listing
Modified Fri Oct 6 15:42:12 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/man
sub-assign to diagonal => sparse; + new bdiag() function

Revision 1615 - Directory Listing
Modified Thu Oct 5 16:30:46 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/man
M[i,j] <- <Matrix>

Revision 1599 - Directory Listing
Modified Fri Sep 29 09:39:50 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/man
more coercion methods (for rare matrices)  => less exceptions

Revision 1592 - Directory Listing
Modified Thu Sep 28 15:31:17 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/man
"Compare" for "dMatrix"; plus a few small ones

Revision 1582 - Directory Listing
Modified Tue Sep 19 08:03:10 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/man
s/dito/ditto/

Revision 1576 - Directory Listing
Modified Mon Sep 18 15:30:37 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/man
small update

Revision 1575 - Directory Listing
Modified Mon Sep 18 14:47:40 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/man
check 'x' slot in l.CMatrix_validate

Revision 1571 - Directory Listing
Modified Sat Sep 16 21:03:12 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
several small fixes + more tests for "lMatrix" classes; "Compare"; "chol"

Revision 1565 - Directory Listing
Modified Fri Sep 15 14:02:48 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
Matrix <-> graph coercion update (for R 2.4.0)

Revision 1551 - Directory Listing
Modified Tue Sep 12 16:39:13 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
1st fix at "Compare"; other small fixes

Revision 1548 - Directory Listing
Modified Mon Sep 11 22:13:07 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
new nMatrix and subclasses; lsparse change to have x slot; many consequences

Revision 1542 - Directory Listing
Modified Sat Sep 9 12:05:46 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
do not define tcrossprod(<matrix>); not yet "graph::"

Revision 1507 - Directory Listing
Modified Mon Sep 4 18:41:34 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Merging changes from Matrix-nolmer branch

Revision 1479 - Directory Listing
Modified Fri Sep 1 23:17:59 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
What was I thinking?  I checked in files without running R CMD check and adding documentation for methods.  Now fixed.

Revision 1472 - Directory Listing
Modified Fri Sep 1 15:31:04 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
miscellaneous tweaks; moved some method definitions higher up

Revision 1467 - Directory Listing
Modified Wed Aug 30 21:35:09 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
several smallish fixes

Revision 1463 - Directory Listing
Modified Tue Aug 29 22:30:57 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Promotion of %*% and solve to RHS of ddenseMatrix

Revision 1462 - Directory Listing
Modified Tue Aug 29 16:34:49 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Generalize %*% methods for sparse matrices

Revision 1460 - Directory Listing
Modified Tue Aug 29 14:07:52 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Promote %*% methods to ddenseMatrix class

Revision 1456 - Directory Listing
Modified Mon Aug 28 15:36:16 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
Arith( dMatrix, dMatrix)

Revision 1455 - Directory Listing
Modified Mon Aug 28 15:35:44 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
Matrix(*, forceCheck)

Revision 1454 - Directory Listing
Modified Mon Aug 28 13:00:39 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
references

Revision 1453 - Directory Listing
Modified Sun Aug 27 16:16:35 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Added triu, tril and band for ddenseMatrix objects.

Revision 1448 - Directory Listing
Modified Sat Aug 26 03:29:36 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Move methods to the CsparseMatrix class

Revision 1447 - Directory Listing
Modified Fri Aug 25 20:38:36 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
use setAs("ddenseMatrix", "dgeMatrix", *) instead of older specific ones

Revision 1446 - Directory Listing
Modified Fri Aug 25 16:48:32 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Change incorrect result class dgCMatrix to dgeMatrix.

Revision 1444 - Directory Listing
Modified Fri Aug 25 14:39:45 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
a bit more "MatrixFactorization" ..

Revision 1443 - Directory Listing
Modified Fri Aug 25 10:44:48 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
1st stab at "MatrixFactorization" class; exporting CHMfactor etc

Revision 1434 - Directory Listing
Modified Thu Aug 24 18:20:02 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Added

Revision 1407 - Directory Listing
Modified Mon Aug 21 15:24:47 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/man
rename class "LU" to "denseLU" and make "LU" virtual

Revision 1401 - Directory Listing
Modified Sun Aug 20 16:15:07 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/man
Document methods for qr.* generics

Revision 1392 - Directory Listing
Modified Fri Aug 18 16:59:15 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
example++

Revision 1391 - Directory Listing
Modified Fri Aug 18 15:42:24 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
small update; extend LU-class example

Revision 1389 - Directory Listing
Modified Fri Aug 18 13:53:33 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
export zapsmall(); define as.numeric and as.logical methods (not yet finished); fix printing "U" diagonal triangular sparse

Revision 1385 - Directory Listing
Modified Thu Aug 17 22:30:01 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/man
Added solve methods for dgCMatrix and documentation

Revision 1383 - Directory Listing
Modified Thu Aug 17 13:57:53 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/man
add sparse LU and QR decompositions

Revision 1378 - Directory Listing
Modified Tue Aug 15 18:25:14 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
update methods list

Revision 1370 - Directory Listing
Modified Mon Aug 14 19:00:02 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/man
Use CHOLMOD code for general methods at CsparseMatrix, TsparseMatrix, denseMatrix or matrix level when possible

Revision 1368 - Directory Listing
Modified Sat Aug 12 17:34:00 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/man
Generalize conversions

Revision 1358 - Directory Listing
Modified Tue Aug 8 16:27:28 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
fix comment

Revision 1356 - Directory Listing
Modified Tue Aug 8 16:24:53 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
enable more examples

Revision 1355 - Directory Listing
Modified Tue Aug 8 16:24:41 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
better (comments in) examples

Revision 1351 - Directory Listing
Modified Mon Aug 7 16:51:14 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
use speedier crossprod() for "dgC" - still slower than t(.) %*% .

Revision 1349 - Directory Listing
Modified Mon Aug 7 09:05:42 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
tril() etc also for T* and Rsparse

Revision 1344 - Directory Listing
Modified Thu Aug 3 17:15:31 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
add data(sleepstudy), needed because of LazyData: no

Revision 1342 - Directory Listing
Modified Tue Aug 1 20:26:45 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/man
hatTrace and warnings about boundary convergence

Revision 1341 - Directory Listing
Modified Tue Aug 1 17:55:57 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
using \dQuote{} and drop nolonger existing 'random.effects'

Revision 1340 - Directory Listing
Modified Tue Aug 1 15:35:23 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/man
Document the caterpillar plot.

Revision 1337 - Directory Listing
Modified Mon Jul 31 23:05:46 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/man
Document postVar argument to ranef method

Revision 1335 - Directory Listing
Modified Mon Jul 31 12:11:35 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
change unused class "correlation" to "corMatrix"

Revision 1334 - Directory Listing
Modified Mon Jul 31 12:11:16 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
rm old remnant

Revision 1332 - Directory Listing
Modified Thu Jul 27 13:42:18 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
more dgRMatrix coercions (5 days ago)

Revision 1331 - Directory Listing
Modified Sat Jul 22 17:59:53 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
many method cleanups; notably some "dgC" -> "Csparse" generaliztations

Revision 1329 - Directory Listing
Modified Fri Jul 21 06:47:06 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
miscellaneous mostly related to sparse indexing

Revision 1328 - Directory Listing
Modified Fri Jul 21 06:46:36 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
export isSymmetric()

Revision 1327 - Directory Listing
Modified Fri Jul 21 06:43:31 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/man
add some SparseM <-> Matrix conversions

Revision 1323 - Directory Listing
Modified Mon Jul 17 18:34:45 2006 UTC (11 years, 5 months ago) by bates
Original Path: pkg/man
Add coersion from CHMfactor to sparseMatrix

Revision 1315 - Directory Listing
Modified Mon Jul 10 16:08:05 2006 UTC (11 years, 5 months ago) by maechler
Original Path: pkg/man
miscellaneous small things, including extended tests; see also ChangeLog

Revision 1314 - Directory Listing
Modified Mon Jul 10 15:23:48 2006 UTC (11 years, 5 months ago) by maechler
Original Path: pkg/man
add lgCMatrix_diag()

Revision 1313 - Directory Listing
Modified Thu Jul 6 17:24:01 2006 UTC (11 years, 5 months ago) by bates
Original Path: pkg/man
Updating documentation

Revision 1305 - Directory Listing
Modified Sat Jul 1 16:18:39 2006 UTC (11 years, 5 months ago) by maechler
Original Path: pkg/man
coercion pMatrix -> Tsparse

Revision 1299 - Directory Listing
Modified Mon Jun 12 08:06:21 2006 UTC (11 years, 6 months ago) by maechler
Original Path: pkg/man
mcmcsamp()[,"deviance"] was wrong column

Revision 1295 - Directory Listing
Modified Fri Jun 9 21:47:22 2006 UTC (11 years, 6 months ago) by maechler
Original Path: pkg/man
coercion to and multiplication of diagonal and sparse matrices

Revision 1290 - Directory Listing
Modified Thu Jun 8 09:30:21 2006 UTC (11 years, 6 months ago) by maechler
Original Path: pkg/man
implemented all 4 of {rowSums(), ... colMeans()}

Revision 1285 - Directory Listing
Modified Sat May 27 20:12:08 2006 UTC (11 years, 6 months ago) by maechler
Original Path: pkg/man
a few small changes, comments - on the way to get to a better "Compare" (group method) approach

Revision 1282 - Directory Listing
Modified Wed May 24 17:00:12 2006 UTC (11 years, 6 months ago) by maechler
Original Path: pkg/man
eliminate a few old "FIXME"s (and add a new one :-)

Revision 1281 - Directory Listing
Modified Wed May 24 14:44:59 2006 UTC (11 years, 6 months ago) by maechler
Original Path: pkg/man
start massive use of \linkS4class{.}

Revision 1271 - Directory Listing
Modified Thu May 18 06:47:09 2006 UTC (11 years, 7 months ago) by maechler
Original Path: pkg/man
some  "sparse <-> graph"  updates

Revision 1268 - Directory Listing
Modified Wed May 17 17:42:09 2006 UTC (11 years, 7 months ago) by bates
Original Path: pkg/man
lowerTriMatrix to tril, upperTriMatrix to triu, added band extractor

Revision 1263 - Directory Listing
Modified Sun Apr 30 15:41:02 2006 UTC (11 years, 7 months ago) by bates
Original Path: pkg/man
Add chol method for pedigree objects

Revision 1260 - Directory Listing
Modified Tue Apr 25 18:43:13 2006 UTC (11 years, 7 months ago) by bates
Original Path: pkg/man
Extend example and add references for pedigree-class

Revision 1258 - Directory Listing
Modified Fri Apr 21 15:44:39 2006 UTC (11 years, 7 months ago) by maechler
Original Path: pkg/man
make pedigree class more memory-efficient; add pedigree()

Revision 1257 - Directory Listing
Modified Wed Apr 19 14:22:07 2006 UTC (11 years, 7 months ago) by bates
Original Path: pkg/man
document qqmath method for ranef.lmer objects

Revision 1254 - Directory Listing
Modified Wed Apr 19 09:17:50 2006 UTC (11 years, 8 months ago) by maechler
Original Path: pkg/man
+ solve methods

Revision 1239 - Directory Listing
Modified Fri Mar 31 09:37:49 2006 UTC (11 years, 8 months ago) by maechler
Original Path: pkg/man
fix some \link[*-class]{*}

Revision 1238 - Directory Listing
Modified Thu Mar 30 19:56:09 2006 UTC (11 years, 8 months ago) by maechler
Original Path: pkg/man
coercions from dgC to triangular (dtC) and symmetric (dsC), etc

Revision 1237 - Directory Listing
Modified Thu Mar 30 15:23:47 2006 UTC (11 years, 8 months ago) by maechler
Original Path: pkg/man
new interesting test dataset

Revision 1235 - Directory Listing
Modified Tue Mar 21 17:15:53 2006 UTC (11 years, 8 months ago) by maechler
Original Path: pkg/man
update ("coef.lmer" class etc)

Revision 1228 - Directory Listing
Modified Wed Mar 15 17:43:34 2006 UTC (11 years, 9 months ago) by maechler
Original Path: pkg/man
put "mm" and "y" datasets into list "KNex" and change the docu, examples, tests, and one vignette accordingly;
 ready for release of 0.995-6

Revision 1226 - Directory Listing
Modified Mon Mar 13 14:07:58 2006 UTC (11 years, 9 months ago) by maechler
Original Path: pkg/man
sparse: "[<-" and better arithmetic; other tweaks

Revision 1224 - Directory Listing
Modified Mon Mar 13 13:05:33 2006 UTC (11 years, 9 months ago) by bates
Original Path: pkg/man
Update documentation to new lmer class structure

Revision 1222 - Directory Listing
Modified Tue Mar 7 11:05:08 2006 UTC (11 years, 9 months ago) by maechler
Original Path: pkg/man
lmer(): non-trivial summary() method -> summary.*mer classes

Revision 1220 - Directory Listing
Modified Fri Mar 3 18:22:35 2006 UTC (11 years, 9 months ago) by maechler
Original Path: pkg/man
add more docu on (l)mer - methods

Revision 1216 - Directory Listing
Modified Wed Feb 8 17:57:31 2006 UTC (11 years, 10 months ago) by maechler
Original Path: pkg/man
another half-baked lmer test; cosmetics

Revision 1215 - Directory Listing
Modified Wed Feb 8 17:54:57 2006 UTC (11 years, 10 months ago) by maechler
Original Path: pkg/man
add simplistic "[<-" method for dgT

Revision 1213 - Directory Listing
Modified Tue Feb 7 23:44:07 2006 UTC (11 years, 10 months ago) by bates
Original Path: pkg/man
Fix case of cbind(successes, failures) for lmer fitting a GLMM (see Changelog)

Revision 1205 - Directory Listing
Modified Tue Jan 24 21:03:04 2006 UTC (11 years, 10 months ago) by bates
Original Path: pkg/man
Fix trivial memory leaks

Revision 1202 - Directory Listing
Modified Mon Jan 23 16:55:43 2006 UTC (11 years, 10 months ago) by maechler
Original Path: pkg/man
add to tests: now also check  setAs("matrix", *)

Revision 1201 - Directory Listing
Modified Mon Jan 23 16:04:12 2006 UTC (11 years, 10 months ago) by maechler
Original Path: pkg/man
Class cleanup; particularly ldense* ones

Revision 1199 - Directory Listing
Modified Mon Jan 23 15:02:13 2006 UTC (11 years, 10 months ago) by maechler
Original Path: pkg/man
export RsparseMatrix

Revision 1189 - Directory Listing
Modified Fri Jan 20 18:13:39 2006 UTC (11 years, 10 months ago) by maechler
Original Path: pkg/man
"dsy" no longer extends "dge"; other small fixes

Revision 1182 - Directory Listing
Modified Thu Jan 19 10:35:09 2006 UTC (11 years, 10 months ago) by maechler
Original Path: pkg/man
s/example/examples/

Revision 1180 - Directory Listing
Modified Thu Jan 19 00:43:37 2006 UTC (11 years, 10 months ago) by bates
Original Path: pkg/man
Over to Martin for release 0.995-2

Revision 1175 - Directory Listing
Modified Tue Jan 17 23:41:36 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/man
Munging the data frame

Revision 1174 - Directory Listing
Modified Mon Jan 16 20:03:48 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/man
make Matrix() "smart" -- with help of quite a few new setAs(. , .) settings

Revision 1173 - Directory Listing
Modified Mon Jan 16 20:02:16 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/man
remove @rcond everywhere, and @factors for triangular ones

Revision 1166 - Directory Listing
Modified Sun Jan 15 19:18:20 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/man
modifications to lmer and related classes

Revision 1165 - Directory Listing
Modified Sat Jan 14 23:41:55 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/man
new coercion to dtr* and dsy* using isSymmetric() and isTriangular(); fix validity checking; some class descriptions

Revision 1163 - Directory Listing
Modified Sat Jan 14 23:13:20 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/man
export comp*- and general- Matrix classes

Revision 1159 - Directory Listing
Modified Fri Jan 13 23:44:16 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/man
Updating the list of slots now that the factor slot is moved to compMatrix

Revision 1149 - Directory Listing
Modified Thu Jan 12 03:40:07 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/man
Updating documentation for new version of mer objects

Revision 1146 - Directory Listing
Modified Thu Jan 12 03:35:32 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/man
Updating documentation for new version of mer objects

Revision 1144 - Directory Listing
Modified Thu Jan 12 03:20:47 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/man
Remove documentation for outmoded classes

Revision 1109 - Directory Listing
Modified Tue Jan 3 16:42:31 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/man
"diagonalMatrix" class and subclasses with a few methods; very basic "ltTMatrix" methods

Revision 1098 - Directory Listing
Modified Thu Dec 29 11:38:59 2005 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/man
some 2-argument-tcrossprod methods (and test svn)

Revision 1087 - Directory Listing
Modified Fri Dec 9 20:55:39 2005 UTC (12 years ago) by maechler
Original Path: pkg/man
make tcrossprod() use 2 arguments (x, y=NULL)

Revision 1062 - Directory Listing
Modified Sat Nov 26 16:29:06 2005 UTC (12 years ago) by bates
Original Path: pkg/man
simulate generic is now in stats package

Revision 1059 - Directory Listing
Modified Wed Nov 23 22:20:13 2005 UTC (12 years ago) by bates
Original Path: pkg/man
Matrix multiplication and coersion at higher level

Revision 976 - Directory Listing
Modified Fri Oct 7 20:18:29 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/man
more examples; update

Revision 959 - Directory Listing
Modified Sat Oct 1 20:10:20 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/man
dtC -> dgC coercion

Revision 956 - Directory Listing
Modified Fri Sep 30 17:28:00 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/man
more coercions; particularly "d" <-> "l"; more tests (and more FIXMEs!); fixing two "index-0 bugs"; ...

Revision 954 - Directory Listing
Modified Wed Sep 28 19:34:31 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/man
more "Compare" and some "!" methods; expm() for sparse; updated tests

Revision 953 - Directory Listing
Modified Wed Sep 28 19:31:36 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/man
move "factors" slot to "Matrix"

Revision 946 - Directory Listing
Modified Wed Sep 28 08:56:42 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/man
some "Summary" methods; some "Compare" group methods; logical dense matrices

Revision 925 - Directory Listing
Modified Mon Sep 19 19:01:31 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/man
too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for sparse ones; more  "s/gTMatrix/TsparseMatrix/" fixes; quite a few more tests, incl some for *all* classes

Revision 924 - Directory Listing
Modified Mon Sep 19 08:40:29 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/man
gTM* -> TsparseM*

Revision 922 - Directory Listing
Modified Sun Sep 18 16:33:54 2005 UTC (12 years, 2 months ago) by bates
Original Path: pkg/man
Added CHOLMOD-based C functions.  Still need methods defined in R and some error checking

Revision 908 - Directory Listing
Modified Thu Sep 8 15:30:08 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
cbind() / cbind2() methods for R >= 2.2.0

Revision 901 - Directory Listing
Modified Tue Sep 6 01:26:11 2005 UTC (12 years, 3 months ago) by bates
Original Path: pkg/man
Add "start" argument to lmer

Revision 893 - Directory Listing
Modified Sat Sep 3 21:54:10 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
workaround Rdconv and Slot-section-parsing buglets

Revision 891 - Directory Listing
Modified Fri Sep 2 13:39:57 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
new symmetric* and triangular* classes` docu: link to them in other places

Revision 889 - Directory Listing
Modified Thu Sep 1 14:19:01 2005 UTC (12 years, 3 months ago) by bates
Original Path: pkg/man
Typo

Revision 888 - Directory Listing
Modified Thu Sep 1 13:46:21 2005 UTC (12 years, 3 months ago) by bates
Original Path: pkg/man
New simulate method for lmer objects

Revision 886 - Directory Listing
Modified Wed Aug 31 17:49:47 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
new classes "index", "symmetricM*" and "triangularM*"; indexing for logical and character indices; new tests; more to do

Revision 882 - Directory Listing
Modified Tue Aug 30 14:37:24 2005 UTC (12 years, 3 months ago) by bates
Original Path: pkg/man
Corrected a typo

Revision 880 - Directory Listing
Modified Tue Aug 30 14:36:41 2005 UTC (12 years, 3 months ago) by bates
Original Path: pkg/man
More coercion methods

Revision 879 - Directory Listing
Modified Tue Aug 30 14:35:05 2005 UTC (12 years, 3 months ago) by bates
Original Path: pkg/man
Added simulate generic and method

Revision 875 - Directory Listing
Modified Sat Aug 27 21:29:21 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
indexing (mainly denseMatrix) - using "vector" indices

Revision 871 - Directory Listing
Modified Fri Aug 26 17:26:49 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
Version 0.98-6: "[" methods for dense matrices; first "[<-"; examples

Revision 869 - Directory Listing
Modified Fri Aug 26 17:23:49 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
better explain diag="U" for dtpMatrix

Revision 868 - Directory Listing
Modified Fri Aug 19 17:01:11 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
printing of sparse logicals; "[" reorganization (part 1)

Revision 867 - Directory Listing
Modified Fri Aug 19 16:59:46 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/man
new "gTMatrix" virtual class

Revision 863 - Directory Listing
Modified Thu Aug 18 21:31:31 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Release 0.98-5

Revision 858 - Directory Listing
Modified Wed Aug 17 05:37:27 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
line wrap; + example

Revision 857 - Directory Listing
Modified Tue Aug 16 22:19:58 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Change method of reading Harwell-Boeing matrix format and change example

Revision 856 - Directory Listing
Modified Tue Aug 16 20:20:13 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
small fixups

Revision 853 - Directory Listing
Modified Tue Aug 16 18:03:01 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Move documentation for readHB and readMM to man/externalFormats.Rd

Revision 851 - Directory Listing
Modified Tue Aug 16 17:39:38 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
export  dgR*, dsR* & dtR* Matrix - and "fix" stubs

Revision 849 - Directory Listing
Modified Tue Aug 16 17:37:09 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
mv \title

Revision 848 - Directory Listing
Modified Thu Aug 11 07:41:59 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
+"denseMatrix" class; export defined but unused classes

Revision 837 - Directory Listing
Modified Mon Aug 8 14:58:55 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Simplify plots of examples in mcmcsamp by making them 1000 points only

Revision 836 - Directory Listing
Modified Mon Aug 8 13:37:04 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
added {tolerance} [was not saved at last "commit"]

Revision 835 - Directory Listing
Modified Mon Aug 8 13:33:18 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Add writeHB and writeMM methods and generic

Revision 834 - Directory Listing
Modified Mon Aug 8 08:36:34 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
misc comments/formatting

Revision 832 - Directory Listing
Modified Mon Aug 8 08:33:55 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
lmer()`s "model = T/F" and control arguments; add comments and "FIXME"s

Revision 830 - Directory Listing
Modified Mon Aug 8 08:22:44 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
add examples + FIXME note

Revision 828 - Directory Listing
Modified Sun Aug 7 21:59:32 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Remove OrchardSprays examples

Revision 826 - Directory Listing
Modified Sun Aug 7 16:28:57 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
add examples of external formats

Revision 825 - Directory Listing
Modified Sun Aug 7 15:22:33 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Harwell-Boeing and MatrixMarket formats

Revision 824 - Directory Listing
Modified Sat Aug 6 20:01:51 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Allow mcmcsamp on transformed parameters

Revision 823 - Directory Listing
Modified Sat Jul 30 21:35:38 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
+ tcrossprod() method for simple "matrix" and "numeric"

Revision 822 - Directory Listing
Modified Sat Jul 30 21:34:15 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/man
get rid of \synopsis{} and document missing args

Revision 820 - Directory Listing
Modified Wed Jul 27 23:07:04 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/man
Version 0.98-1

Revision 789 - Directory Listing
Modified Sat Jul 2 20:55:50 2005 UTC (12 years, 5 months ago) by maechler
Original Path: pkg/man
separate docu for ddenseMatrix class

Revision 788 - Directory Listing
Modified Fri Jul 1 10:19:36 2005 UTC (12 years, 5 months ago) by maechler
Original Path: pkg/man
add concept for GLMM

Revision 772 - Directory Listing
Modified Thu Jun 9 16:57:55 2005 UTC (12 years, 6 months ago) by bates
Original Path: pkg/man
Prepare for release 0.96-1

Revision 769 - Directory Listing
Modified Wed Jun 8 23:47:45 2005 UTC (12 years, 6 months ago) by bates
Original Path: pkg/man
Moving lmer to the Matrix package

Revision 768 - Directory Listing
Modified Wed Jun 8 17:19:21 2005 UTC (12 years, 6 months ago) by maechler
Original Path: pkg/man
re-instantiate old examples / tests since R-devel bug seems gone now

Revision 758 - Directory Listing
Modified Mon Jun 6 15:46:28 2005 UTC (12 years, 6 months ago) by bates
Original Path: pkg/man
Fix matrix multiplication methods

Revision 757 - Directory Listing
Modified Mon Jun 6 15:39:04 2005 UTC (12 years, 6 months ago) by bates
Original Path: pkg/man
Comment out problematic tests

Revision 744 - Directory Listing
Modified Tue May 17 17:46:19 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/man
Adding logical sparse matrix methods

Revision 735 - Directory Listing
Modified Tue May 17 17:20:01 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/man
Adding logical sparse matrix methods

Revision 725 - Directory Listing
Modified Tue May 10 14:50:39 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/man
Release 0.95-8 with bug fix for sparse symmetric solve

Revision 723 - Directory Listing
Modified Tue May 10 01:42:05 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/man
More logical sparse matrix methods

Revision 722 - Directory Listing
Modified Mon May 9 14:29:12 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/man


Revision 720 - Directory Listing
Modified Mon May 9 01:32:44 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/man
Methods for logical general sparse matrices

Revision 714 - Directory Listing
Modified Fri May 6 23:52:34 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/man
Added colSums and friends for dgeMatrix class

Revision 702 - Directory Listing
Modified Thu Apr 21 13:00:36 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/man
Moving Doxyfile

Revision 697 - Directory Listing
Modified Mon Apr 18 20:18:46 2005 UTC (12 years, 8 months ago) by maechler
Original Path: pkg/man
numeric x dgeMatrix : for solve etc

Revision 687 - Directory Listing
Modified Fri Apr 1 07:36:09 2005 UTC (12 years, 8 months ago) by maechler
Original Path: pkg/man
"[" and show() methods for sparse matrices => RFC

Revision 686 - Directory Listing
Modified Thu Mar 31 21:19:35 2005 UTC (12 years, 8 months ago) by bates
Original Path: pkg/man
Create "fallback" methods for any kind of numeric, dense matrix

Revision 685 - Directory Listing
Modified Thu Mar 31 18:17:28 2005 UTC (12 years, 8 months ago) by bates
Original Path: pkg/man
Multiplication operations for sparseMatrix and ddenseMatrix

Revision 683 - Directory Listing
Modified Thu Mar 31 17:10:16 2005 UTC (12 years, 8 months ago) by bates
Original Path: pkg/man
Moving methods for operations with numeric to the Matrix class and with integer to the dMatrix class

Revision 677 - Directory Listing
Modified Mon Mar 28 14:03:32 2005 UTC (12 years, 8 months ago) by bates
Original Path: pkg/man
Added dgRMatrix methods and documentation

Revision 676 - Directory Listing
Modified Sat Mar 26 15:59:18 2005 UTC (12 years, 8 months ago) by maechler
Original Path: pkg/man
+ virtual "sparseMatrix" classes

Revision 675 - Directory Listing
Modified Sat Mar 26 11:16:05 2005 UTC (12 years, 8 months ago) by maechler
Original Path: pkg/man
export csc_tcrossprod - and add examples & test for tcrossprod()

Revision 665 - Directory Listing
Modified Thu Mar 24 13:06:09 2005 UTC (12 years, 8 months ago) by bates
Original Path: pkg/man
Removing the ssclme and sscCrosstab classes

Revision 664 - Directory Listing
Modified Thu Mar 24 13:00:09 2005 UTC (12 years, 8 months ago) by maechler
Original Path: pkg/man
make virtual classes "VIRTUAL"

Revision 663 - Directory Listing
Modified Wed Mar 23 17:36:48 2005 UTC (12 years, 8 months ago) by bates
Original Path: pkg/man
Moving all ssclme-related R code to the lme4 package

Revision 659 - Directory Listing
Modified Thu Mar 17 17:53:10 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
cosmetic; examples

Revision 658 - Directory Listing
Modified Thu Mar 17 17:52:06 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
+ as.matrix() + unname() method

Revision 657 - Directory Listing
Modified Wed Mar 16 16:57:52 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
more %*% and setAs(); tests too

Revision 654 - Directory Listing
Modified Wed Mar 16 16:18:33 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Generalize matrix multiplication and solve methods

Revision 652 - Directory Listing
Modified Wed Mar 16 01:08:36 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Updates to multiplication and other methods

Revision 651 - Directory Listing
Modified Tue Mar 15 01:54:50 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Document methods and add links

Revision 650 - Directory Listing
Modified Tue Mar 15 01:53:58 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Correct the coercion to matrix

Revision 647 - Directory Listing
Modified Tue Mar 15 00:56:35 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Document methods for dppMatrix class

Revision 646 - Directory Listing
Modified Tue Mar 15 00:52:35 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
'unpack' methods

Revision 642 - Directory Listing
Modified Tue Mar 15 00:49:32 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
'unpack' methods

Revision 638 - Directory Listing
Modified Tue Mar 15 00:43:21 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
permutation matrix class

Revision 636 - Directory Listing
Modified Tue Mar 15 00:40:58 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Coercions and methods for dppMatrix and dspMatrix classes

Revision 634 - Directory Listing
Modified Sun Mar 13 21:01:45 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
updates

Revision 631 - Directory Listing
Modified Sun Mar 13 04:34:52 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Add BunchKaufman factorization

Revision 628 - Directory Listing
Modified Thu Mar 10 17:57:47 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
more  %*% methods; some dimnames in C (untested); checks extended

Revision 627 - Directory Listing
Modified Mon Mar 7 17:36:38 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
oops! I believed the outdated docu -- it *IS* an S4 generic, really!

Revision 626 - Directory Listing
Modified Mon Mar 7 17:19:03 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
cosmetic additions

Revision 621 - Directory Listing
Modified Sat Mar 5 21:23:09 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
mainly changed \alias{}es for methods

Revision 611 - Directory Listing
Modified Fri Mar 4 17:34:45 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
\alias{.} for the new methods

Revision 606 - Directory Listing
Modified Fri Mar 4 17:29:37 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
add "dMatrix" group methods and doc file

Revision 602 - Directory Listing
Modified Fri Mar 4 12:48:40 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Remove references to pdfactor

Revision 597 - Directory Listing
Modified Thu Mar 3 19:58:59 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Methods and coercions for the dtpMatrix class

Revision 594 - Directory Listing
Modified Thu Mar 3 05:17:51 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Remove pdfactor class

Revision 589 - Directory Listing
Modified Wed Mar 2 19:53:53 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
more coercions

Revision 579 - Directory Listing
Modified Sun Feb 27 00:04:16 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
dimnames(), "dimnames() <-", better t(), etc

Revision 573 - Directory Listing
Modified Sat Feb 26 18:06:08 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/man
more group methods and testing them

Revision 570 - Directory Listing
Modified Fri Feb 25 13:21:03 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Move ScotsSec to mlmRev package

Revision 561 - Directory Listing
Modified Fri Feb 18 19:24:43 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
Release 0.95-1

Revision 558 - Directory Listing
Modified Thu Feb 17 18:12:34 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/man
coercion method documentation

Revision 547 - Directory Listing
Modified Tue Feb 15 22:09:25 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Methods and coercions for the dtTMatrix class

Revision 542 - Directory Listing
Modified Thu Feb 10 17:30:10 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
"Arith" group methods work!

Revision 540 - Directory Listing
Modified Thu Feb 10 14:32:59 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
more "Done"

Revision 538 - Directory Listing
Modified Thu Feb 10 13:50:27 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
add @Dimnames (-> new "mm")

Revision 528 - Directory Listing
Modified Mon Feb 7 10:52:50 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Spelling mistake

Revision 527 - Directory Listing
Modified Mon Feb 7 10:52:37 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Spelling mistake

Revision 519 - Directory Listing
Modified Sat Feb 5 14:25:56 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
some matrix exponential tests

Revision 515 - Directory Listing
Modified Sat Feb 5 13:53:55 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
example (and indentation)

Revision 514 - Directory Listing
Modified Fri Feb 4 23:57:12 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
minor cleanup

Revision 508 - Directory Listing
Modified Fri Feb 4 18:22:28 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
oops! (in example)

Revision 507 - Directory Listing
Modified Fri Feb 4 18:19:29 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
2 typos

Revision 506 - Directory Listing
Modified Fri Feb 4 18:19:08 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
cosmetic

Revision 505 - Directory Listing
Modified Fri Feb 4 18:18:48 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
cosmetic;
call  image() in example

Revision 504 - Directory Listing
Modified Fri Feb 4 18:18:25 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
add examples

Revision 503 - Directory Listing
Modified Fri Feb 4 18:18:06 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
typo

Revision 502 - Directory Listing
Modified Fri Feb 4 18:17:53 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
cosmetic

Revision 501 - Directory Listing
Modified Fri Feb 4 18:17:36 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
update

Revision 500 - Directory Listing
Modified Fri Feb 4 18:17:18 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/man
typo;
extend example with stopifnot()

Revision 495 - Directory Listing
Modified Thu Feb 3 18:48:31 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Initial implementation of the Schur generic

Revision 492 - Directory Listing
Modified Thu Feb 3 14:24:03 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Getting package to pass CMD check

Revision 489 - Directory Listing
Modified Wed Feb 2 19:12:03 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
renaming and rearranging classes

Revision 487 - Directory Listing
Modified Wed Feb 2 19:02:36 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
renaming and rearranging classes

Revision 486 - Directory Listing
Modified Wed Feb 2 17:41:09 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
renaming and rearranging classes

Revision 484 - Directory Listing
Modified Wed Feb 2 17:14:07 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
renaming and rearranging classes

Revision 481 - Directory Listing
Modified Wed Feb 2 15:01:50 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Renaming and reorganizing classes

Revision 480 - Directory Listing
Modified Wed Feb 2 14:59:12 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Renaming and reorganizing classes

Revision 476 - Directory Listing
Modified Wed Feb 2 11:51:24 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Change name of slot from factorization to factors

Revision 462 - Directory Listing
Modified Sat Jan 29 14:10:36 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Move lmer class to lme4

Revision 461 - Directory Listing
Modified Sat Jan 29 14:09:38 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Add expm function

Revision 448 - Directory Listing
Modified Fri Jan 21 21:59:45 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/man
Release 0.8-23

Revision 422 - Directory Listing
Modified Tue Jan 4 23:45:15 2005 UTC (12 years, 11 months ago) by bates
Original Path: pkg/man
Check in prior to leaving for Zuerich

Revision 420 - Directory Listing
Modified Mon Jan 3 19:26:58 2005 UTC (12 years, 11 months ago) by bates
Original Path: pkg/man
Change to the lmer representation

Revision 396 - Directory Listing
Modified Thu Dec 16 19:14:49 2004 UTC (13 years ago) by bates
Original Path: pkg/man
Document new coercion and determinant methods

Revision 389 - Directory Listing
Modified Tue Dec 14 19:58:04 2004 UTC (13 years ago) by bates
Original Path: pkg/man
Remove bbCrosstab and references to it

Revision 374 - Directory Listing
Modified Sun Dec 5 13:55:19 2004 UTC (13 years ago) by bates
Original Path: pkg/man
renaming bbCrosstab to bCrosstab

Revision 352 - Directory Listing
Modified Tue Nov 23 15:41:03 2004 UTC (13 years ago) by bates
Original Path: pkg/man
remove redundant method alias

Revision 342 - Directory Listing
Modified Mon Nov 15 13:55:52 2004 UTC (13 years, 1 month ago) by bates
Original Path: pkg/man
Updates for factorization name and default value

Revision 330 - Directory Listing
Modified Fri Nov 12 21:02:51 2004 UTC (13 years, 1 month ago) by bates
Original Path: pkg/man
update methods

Revision 326 - Directory Listing
Modified Sat Nov 6 18:03:14 2004 UTC (13 years, 1 month ago) by bates
Original Path: pkg/man
Add blocked/blocked cross-tabulation class

Revision 281 - Directory Listing
Modified Sat Oct 2 15:03:09 2004 UTC (13 years, 2 months ago) by bates
Original Path: pkg/man
Document cscBlocked class

Revision 263 - Directory Listing
Modified Thu Aug 26 16:01:35 2004 UTC (13 years, 3 months ago) by bates
Original Path: pkg/man
extending lmeRep to multiple nested grouping factors

Revision 257 - Directory Listing
Modified Tue Aug 24 02:08:08 2004 UTC (13 years, 3 months ago) by bates
Original Path: pkg/man
Remove taucs, add lmeRep, new release

Revision 241 - Directory Listing
Modified Wed Jul 7 18:23:11 2004 UTC (13 years, 5 months ago) by bates
Original Path: pkg/man
Remove pdMat classes

Revision 229 - Directory Listing
Modified Tue Jun 15 21:37:15 2004 UTC (13 years, 6 months ago) by bates
Original Path: pkg/man
Escape % characters in .Rd files

Revision 111 - Directory Listing
Modified Tue Apr 20 15:46:04 2004 UTC (13 years, 7 months ago) by bates
Original Path: pkg/man
Release 0.8-5

Revision 79 - Directory Listing
Modified Wed Apr 14 22:55:10 2004 UTC (13 years, 8 months ago) by bates
Original Path: pkg/man
Documentation updates

Revision 72 - Directory Listing
Modified Mon Apr 12 22:25:55 2004 UTC (13 years, 8 months ago) by bates
Original Path: pkg/man
added R version of groupedPerm function, corrected sscCrosstab arguments

Revision 48 - Directory Listing
Modified Tue Apr 6 02:25:26 2004 UTC (13 years, 8 months ago) by bates
Original Path: pkg/man
Cleaning up from R CMD check

Revision 10 - Directory Listing
Added Mon Mar 22 20:20:05 2004 UTC (13 years, 8 months ago) by bates
Original Path: pkg/man
Initial import

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