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Revision 3222 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 8 16:33:52 2017 UTC (4 months, 1 week ago) by mmaechler
File length: 8714 byte(s)
Diff to previous 3220
export .trDiagonal()

Revision 3220 - (view) (download) (annotate) - [select for diffs]
Modified Sat Aug 5 12:33:48 2017 UTC (4 months, 1 week ago) by mmaechler
File length: 8699 byte(s)
Diff to previous 3219
.Matrix.avoiding.as.matrix <- FALSE (and make it work!)

Revision 3219 - (view) (download) (annotate) - [select for diffs]
Modified Sat Aug 5 11:48:00 2017 UTC (4 months, 1 week ago) by mmaechler
File length: 8672 byte(s)
Diff to previous 3209
new .asmatrix() -- trying to deprecate as.matrix() via .Matrix.avoiding.as.matrix <- TRUE --- but this will not be released
this gives WARNING (undocumented "svn") in R < 3.5.0(= R-devel)

Revision 3209 - (view) (download) (annotate) - [select for diffs]
Modified Tue Mar 7 21:52:35 2017 UTC (9 months, 1 week ago) by mmaechler
File length: 8641 byte(s)
Diff to previous 3145
new c.sparseVector() [S3 method, also usable directly]; fix sp2vec() {last commit}

Revision 3145 - (view) (download) (annotate) - [select for diffs]
Modified Thu Oct 8 15:51:52 2015 UTC (2 years, 2 months ago) by mmaechler
File length: 8516 byte(s)
Diff to previous 3143
rename hidden .solve.sparse.dgC() to .solve.dgC.lu() *and* export

Revision 3143 - (view) (download) (annotate) - [select for diffs]
Modified Wed Sep 2 21:29:32 2015 UTC (2 years, 3 months ago) by mmaechler
File length: 8489 byte(s)
Diff to previous 3129
export MatrixClass() - and use e.g., in "Math", fixing bug in n.CMatrix treatment for "extended" class; similarly fix as(<>, *) for that case

Revision 3129 - (view) (download) (annotate) - [select for diffs]
Modified Fri Jul 3 16:48:56 2015 UTC (2 years, 5 months ago) by mmaechler
File length: 8467 byte(s)
Diff to previous 3104
import things from "base" packages

Revision 3104 - (view) (download) (annotate) - [select for diffs]
Modified Fri May 8 06:46:18 2015 UTC (2 years, 7 months ago) by mmaechler
File length: 8161 byte(s)
Diff to previous 3097
as.vector(<sparseVector>) etc via S3 (I say "hack")

Revision 3097 - (view) (download) (annotate) - [select for diffs]
Modified Wed Apr 29 16:14:56 2015 UTC (2 years, 7 months ago) by mmaechler
File length: 8059 byte(s)
Diff to previous 3084
mini update, mainly NEWS.Rd; formal version++ => 1.2-1

Revision 3084 - (view) (download) (annotate) - [select for diffs]
Modified Wed Apr 1 14:54:53 2015 UTC (2 years, 8 months ago) by mmaechler
File length: 8080 byte(s)
Diff to previous 3083
rename nC2d/nC2l to .nC2d / .nC2l and export

Revision 3083 - (view) (download) (annotate) - [select for diffs]
Modified Wed Apr 1 14:46:57 2015 UTC (2 years, 8 months ago) by mmaechler
File length: 8055 byte(s)
Diff to previous 3069
.C2nC() low-level; export

Revision 3069 - (view) (download) (annotate) - [select for diffs]
Modified Thu Mar 26 10:00:49 2015 UTC (2 years, 8 months ago) by mmaechler
File length: 8046 byte(s)
Diff to previous 3059
Fixed FIXME: Csparse o dense - matrix products: now *all*  t() happen in C,
partly thanks to our new  chm_transpose_dense() function.
Csparse o Csparse : now have `boolArith` argument {not entirely finished}
New %&% : Boolean Arithmetic Matrix products      {not entirely finished}
C level: <sparse pattern> o <sparse numeric> : now return numeric "by default" / pattern "on demand"

Revision 3059 - (view) (download) (annotate) - [select for diffs]
Modified Mon Mar 16 17:40:18 2015 UTC (2 years, 9 months ago) by mmaechler
File length: 8032 byte(s)
Diff to previous 3033
export and speedup  uniqTsparse(); also export anyDuplicatedT()
Improve the documentation about "non-unique Tsparse" matrices etc.
next Version: 1.2-0

Revision 3033 - (view) (download) (annotate) - [select for diffs]
Modified Fri Jan 16 15:47:57 2015 UTC (2 years, 10 months ago) by mmaechler
File length: 7946 byte(s)
Diff to previous 3000
export a wrapper of the dgCMatrix_cholsol and dgCMatrix_qrsol C functions used in package MatrixModels

Revision 3000 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 12 10:29:50 2014 UTC (3 years, 4 months ago) by mmaechler
File length: 7903 byte(s)
Diff to previous 2987
"Math" and "Summary" methods now put in one (newly created) file; more tests for these..

Revision 2987 - (view) (download) (annotate) - [select for diffs]
Modified Sat Apr 26 19:14:30 2014 UTC (3 years, 7 months ago) by mmaechler
File length: 7797 byte(s)
Diff to previous 2978
new rsparsematrix() {with 'encoding trick'} for random sparse matrices;  
m_encodeInd[2]?() gains new argument 'orig_1'

Revision 2978 - (view) (download) (annotate) - [select for diffs]
Modified Wed Mar 26 18:17:09 2014 UTC (3 years, 8 months ago) by mmaechler
File length: 7780 byte(s)
Diff to previous 2975
using .hasSlot() is faster than checking for "compMatrix"

Revision 2975 - (view) (download) (annotate) - [select for diffs]
Modified Mon Mar 24 17:46:07 2014 UTC (3 years, 8 months ago) by mmaechler
File length: 7770 byte(s)
Diff to previous 2963
workaround fact that R`s  DispatchOrEval() {in coerce.c`s do_anyNA()} 
fails to dispatch for "xMatrix" (even when that would be exported as class)

Revision 2963 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jan 29 09:52:18 2014 UTC (3 years, 10 months ago) by mmaechler
File length: 7584 byte(s)
Diff to previous 2960
finally activate  anyNA() for R >= 3.1.0 (instead of " > " !)

Revision 2960 - (view) (download) (annotate) - [select for diffs]
Modified Tue Jan 28 15:34:21 2014 UTC (3 years, 10 months ago) by mmaechler
File length: 7583 byte(s)
Diff to previous 2959
A few things at once:
1) all.equal(*,..): "tolerance" instead of "tol";  "check.attributes"
2) All matrix products (%*%, [t]crossprod) in one new *.Rd file: man/matrix-products.Rd
3) R/products.R : Extend matrix products (and consistency tests) 
   a. to work with sparseVectors, 
   b. to correctly work in some cases they did not
   c. to be faster in other cases

Revision 2959 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jan 20 16:24:19 2014 UTC (3 years, 10 months ago) by mmaechler
File length: 7573 byte(s)
Diff to previous 2934
new .dsy2mat(), .dxCmat(), .T2Cmat(); faster as(<dtCmatrix>, "matrix")

Revision 2934 - (view) (download) (annotate) - [select for diffs]
Modified Mon Dec 2 15:56:50 2013 UTC (4 years ago) by mmaechler
File length: 7538 byte(s)
Diff to previous 2927
T2graph() and graph2T() export old functionality explicitly; 
tweaks in  <graph>  <->  <sparseMatrix>  conversions.  Notably,
as(<graph>, <Matrix>) now more often returns an "n..Matrix" (0/1 pattern), instead of a numeric 
sparse Matrix with all x = 1.

Revision 2927 - (view) (download) (annotate) - [select for diffs]
Modified Sat Sep 28 18:50:51 2013 UTC (4 years, 2 months ago) by mmaechler
File length: 7462 byte(s)
Diff to previous 2923
Matrix 1.0-16: *no* "Depends", just "Imports"

Revision 2923 - (view) (download) (annotate) - [select for diffs]
Modified Thu Sep 26 16:38:00 2013 UTC (4 years, 2 months ago) by mmaechler
File length: 7438 byte(s)
Diff to previous 2916
export fac2sparse() and fac2Sparse(), after adding new giveCsparse option

Revision 2916 - (view) (download) (annotate) - [select for diffs]
Modified Mon Sep 16 14:09:40 2013 UTC (4 years, 2 months ago) by mmaechler
File length: 7282 byte(s)
Diff to previous 2904
new .SuiteSparse_version()

Revision 2904 - (view) (download) (annotate) - [select for diffs]
Modified Tue Sep 10 19:43:53 2013 UTC (4 years, 3 months ago) by mmaechler
File length: 7258 byte(s)
Diff to previous 2892
export isDiagonal() and isTriangular(): other package like to use them

Revision 2892 - (view) (download) (annotate) - [select for diffs]
Modified Thu Aug 29 09:58:34 2013 UTC (4 years, 3 months ago) by mmaechler
File length: 7250 byte(s)
Diff to previous 2881
new indMatrix class from Fabian Scheibl

Revision 2881 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jul 3 10:14:19 2013 UTC (4 years, 5 months ago) by mmaechler
File length: 7227 byte(s)
Diff to previous 2875
provide anyNA(.) methods, for R >= 3.1.0

Revision 2875 - (view) (download) (annotate) - [select for diffs]
Modified Tue May 7 13:26:35 2013 UTC (4 years, 7 months ago) by mmaechler
File length: 7176 byte(s)
Diff to previous 2869
new KhatriRao()

Revision 2869 - (view) (download) (annotate) - [select for diffs]
Modified Mon Feb 25 09:30:40 2013 UTC (4 years, 9 months ago) by mmaechler
File length: 7162 byte(s)
Diff to previous 2865
Remove 'svn rev' check as it is almost surely not triggering nowadays,
[helping Hin-Tak to build R in a way that is explicitly not supported... ]

Revision 2865 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jan 30 11:14:48 2013 UTC (4 years, 10 months ago) by mmaechler
File length: 7193 byte(s)
Diff to previous 2853
new utility  is.null.DN() - also used for Matrix construction

Revision 2853 - (view) (download) (annotate) - [select for diffs]
Modified Thu Nov 22 07:52:08 2012 UTC (5 years ago) by mmaechler
File length: 7172 byte(s)
Diff to previous 2837
provide fast C version and export  invPerm()

Revision 2837 - (view) (download) (annotate) - [select for diffs]
Modified Mon Sep 10 21:46:15 2012 UTC (5 years, 3 months ago) by mmaechler
File length: 7132 byte(s)
Diff to previous 2832
toeplitz(<sparseVector>);  more use of  paste0 ()

Revision 2832 - (view) (download) (annotate) - [select for diffs]
Modified Sat Sep 1 22:10:51 2012 UTC (5 years, 3 months ago) by mmaechler
File length: 7096 byte(s)
Diff to previous 2820
fix "sparseMatrix" / "numeric"  inefficiency; new sparseVector() constructor

Revision 2820 - (view) (download) (annotate) - [select for diffs]
Modified Mon Aug 20 14:06:23 2012 UTC (5 years, 3 months ago) by mmaechler
File length: 7073 byte(s)
Diff to previous 2814
make arithmetic (and "Ops") considerably more efficient for large diagonal matrices {thanks to a report by Harold Doran}

Revision 2814 - (view) (download) (annotate) - [select for diffs]
Modified Tue Jul 24 14:02:28 2012 UTC (5 years, 4 months ago) by mmaechler
File length: 7044 byte(s)
Diff to previous 2811
more Ops are checked and work; new is.finite() and is.infinite() methods (+ checks for them)

Revision 2811 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jul 16 15:50:31 2012 UTC (5 years, 5 months ago) by mmaechler
File length: 7016 byte(s)
Diff to previous 2807
denseMatrix methods for  'diag<-' which preserve (uni)triangularity, symmetry,
etc and are fast via C *_setDiag() functions.
Further, more Ops, e.g. preserving symmetry for  <symmetric> o <diagonal>

Revision 2807 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jun 30 17:28:42 2012 UTC (5 years, 5 months ago) by mmaechler
File length: 6994 byte(s)
Diff to previous 2784
new pack(); more unpack() methods

Revision 2784 - (view) (download) (annotate) - [select for diffs]
Modified Fri Jun 8 17:01:25 2012 UTC (5 years, 6 months ago) by mmaechler
File length: 6986 byte(s)
Diff to previous 2780
update(Cholesky(.), <dgCMatrix>) now warns and coerces;
many small comments and some more docu for Cholesky() and update(); --> TODO

Revision 2780 - (view) (download) (annotate) - [select for diffs]
Modified Wed Apr 18 12:20:47 2012 UTC (5 years, 7 months ago) by mmaechler
File length: 6908 byte(s)
Diff to previous 2775
new  updown() [interface to CHOLMOD_updown] for up-/down-dating a Cholesky decomposition

Revision 2775 - (view) (download) (annotate) - [select for diffs]
Modified Fri Mar 16 07:40:54 2012 UTC (5 years, 9 months ago) by mmaechler
File length: 6874 byte(s)
Diff to previous 2745
version requiring  R >= 2.15.0

Revision 2745 - (view) (download) (annotate) - [select for diffs]
Modified Sat Dec 31 21:11:48 2011 UTC (5 years, 11 months ago) by mmaechler
File length: 6929 byte(s)
Diff to previous 2744
also import cbind2, rbind2

Revision 2744 - (view) (download) (annotate) - [select for diffs]
Modified Fri Dec 30 18:51:18 2011 UTC (5 years, 11 months ago) by mmaechler
File length: 6913 byte(s)
Diff to previous 2738
Matrix_check_class_etc() has been in R-devel for a while now;
NAMESPACE imports for border line situation

Revision 2738 - (view) (download) (annotate) - [select for diffs]
Modified Fri Nov 4 21:37:07 2011 UTC (6 years, 1 month ago) by mmaechler
File length: 6640 byte(s)
Diff to previous 2725
no longer assignInNamespace when R >= 2.15.0

Revision 2725 - (view) (download) (annotate) - [select for diffs]
Modified Sat Oct 8 19:48:44 2011 UTC (6 years, 2 months ago) by mmaechler
File length: 6567 byte(s)
Diff to previous 2702
cbind2() and rbind2() methods for the mix of sparse & dense

Revision 2702 - (view) (download) (annotate) - [select for diffs]
Modified Wed Aug 17 16:28:54 2011 UTC (6 years, 4 months ago) by mmaechler
File length: 6647 byte(s)
Diff to previous 2697
export diagU2N() and diagN2U()

Revision 2697 - (view) (download) (annotate) - [select for diffs]
Modified Thu Aug 11 08:13:34 2011 UTC (6 years, 4 months ago) by mmaechler
File length: 6618 byte(s)
Diff to previous 2695
importFrom(method, *) :  + coerce, show  
-- the latter necessary for  loadNamespace(epoc)  when methods is not loaded.

Revision 2695 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 9 19:43:57 2011 UTC (6 years, 4 months ago) by mmaechler
File length: 6536 byte(s)
Diff to previous 2676
make sure assignInNamspace is "there"

Revision 2676 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jun 25 19:14:05 2011 UTC (6 years, 5 months ago) by mmaechler
File length: 6517 byte(s)
Diff to previous 2634
define S3 methods for as.array(), as.matrix() & as.vector()  *instead* of writing into base NS

Revision 2634 - (view) (download) (annotate) - [select for diffs]
Modified Sat Dec 18 16:52:33 2010 UTC (6 years, 11 months ago) by mmaechler
File length: 6374 byte(s)
Diff to previous 2616
get rid of model.Matrix() {stub to pkg "MatrixModels"}

Revision 2616 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 24 16:15:00 2010 UTC (7 years, 3 months ago) by mmaechler
File length: 6449 byte(s)
Diff to previous 2610
sparse.model.matrix(): drop.unused.levels = *FALSE* / printSpMatrix() using FormatSpMatrix() and that is modularized

Revision 2610 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 10 15:10:21 2010 UTC (7 years, 4 months ago) by mmaechler
File length: 6360 byte(s)
Diff to previous 2590
export & document .bdiag(), too

Revision 2590 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jul 28 20:21:55 2010 UTC (7 years, 4 months ago) by mmaechler
File length: 6350 byte(s)
Diff to previous 2588
add a model.Matrix() "proxy" - for back-compatibility

Revision 2588 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jul 26 10:06:18 2010 UTC (7 years, 4 months ago) by mmaechler
File length: 6275 byte(s)
Diff to previous 2586
new package "MatrixModels" split off Matrix - for modelMatrix(), prediction & response Modules, etc

Revision 2586 - (view) (download) (annotate) - [select for diffs]
Modified Sun Jul 25 02:32:06 2010 UTC (7 years, 4 months ago) by mmaechler
File length: 7606 byte(s)
Copied from: pkg/NAMESPACE revision 2583
Diff to previous 2583
move Matrix/ directory "down"

Revision 2583 - (view) (download) (annotate) - [select for diffs]
Modified Sun Jul 25 01:11:09 2010 UTC (7 years, 4 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 7606 byte(s)
Diff to previous 2582
remove the SPQR parts - as we have done before "build" for a long time anyway

Revision 2582 - (view) (download) (annotate) - [select for diffs]
Modified Sun Jul 25 01:05:54 2010 UTC (7 years, 4 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 7600 byte(s)
Diff to previous 2572
some glpModel methods -- "commit before move"

Revision 2572 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jul 17 16:54:41 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 7256 byte(s)
Diff to previous 2569
formula(<Model); other minor cleanup

Revision 2569 - (view) (download) (annotate) - [select for diffs]
Modified Fri Jul 16 15:04:45 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 7193 byte(s)
Diff to previous 2565
IRLS() tweaks; update( <glm4> ); "Model" mother class

Revision 2565 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jul 12 16:32:48 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 7184 byte(s)
Diff to previous 2561
"glpModel": docu etc; "CholeskyFactorization"

Revision 2561 - (view) (download) (annotate) - [select for diffs]
Modified Fri Jul 9 13:54:03 2010 UTC (7 years, 5 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 7149 byte(s)
Diff to previous 2557
fix \linkS4class{} typos; add trivial comments, export "lpMod"

Revision 2557 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jul 7 20:43:10 2010 UTC (7 years, 5 months ago) by dmbates
Original Path: pkg/NAMESPACE
File length: 7098 byte(s)
Diff to previous 2544
Initial version of respModule and predModule; glm1 (hidden) function

Revision 2544 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jun 2 09:29:01 2010 UTC (7 years, 6 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6574 byte(s)
Diff to previous 2532
new model.Matrix(), sparse.model.matrix() return "modelMatrix" class

Revision 2532 - (view) (download) (annotate) - [select for diffs]
Modified Sat May 1 20:49:55 2010 UTC (7 years, 7 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6364 byte(s)
Diff to previous 2527
new condest(), onenormest(); a bit more "pMatrix" methods

Revision 2527 - (view) (download) (annotate) - [select for diffs]
Modified Tue Mar 30 17:22:44 2010 UTC (7 years, 8 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6332 byte(s)
Diff to previous 2526
enable sparse.model.matrix( ~ 1)

Revision 2526 - (view) (download) (annotate) - [select for diffs]
Modified Sat Mar 27 11:08:43 2010 UTC (7 years, 8 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6275 byte(s)
Diff to previous 2522
which() methods + checks; small things

Revision 2522 - (view) (download) (annotate) - [select for diffs]
Modified Mon Mar 1 21:18:27 2010 UTC (7 years, 9 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6252 byte(s)
Diff to previous 2520
export + doc rep2abI()

Revision 2520 - (view) (download) (annotate) - [select for diffs]
Modified Fri Feb 12 10:51:37 2010 UTC (7 years, 10 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6241 byte(s)
Diff to previous 2514
det(): export regularly (with "masking warning") instead of base namespace hack

Revision 2514 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jan 23 22:18:53 2010 UTC (7 years, 10 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6317 byte(s)
Diff to previous 2507
nnzero() is generic; det[erminant]() cosmetic

Revision 2507 - (view) (download) (annotate) - [select for diffs]
Modified Tue Dec 22 21:11:49 2009 UTC (7 years, 11 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6109 byte(s)
Diff to previous 2497
many "abIndex" methods and tests ++ see ChangeLog

Revision 2497 - (view) (download) (annotate) - [select for diffs]
Modified Sat Nov 14 21:36:25 2009 UTC (8 years, 1 month ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 5971 byte(s)
Diff to previous 2468
put "abIndex" class in, even if very unfinished;
otherwise, too many changed files get in my way

Revision 2468 - (view) (download) (annotate) - [select for diffs]
Modified Wed Sep 16 14:41:39 2009 UTC (8 years, 3 months ago) by dmbates
Original Path: pkg/NAMESPACE
File length: 5935 byte(s)
Diff to previous 2445
Add chol2inv method

Revision 2445 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jul 27 13:38:31 2009 UTC (8 years, 4 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 5909 byte(s)
Diff to previous 2439
sparse.model.matrix() rewrite and tests

Revision 2439 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jul 18 16:03:36 2009 UTC (8 years, 4 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 5866 byte(s)
Diff to previous 2422
Cholesky(*, super = NA): fix "factors" caching

Revision 2422 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jul 11 20:36:10 2009 UTC (8 years, 5 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 5829 byte(s)
Diff to previous 2415
export isLDL, test it; small fixes WRT contr.*(., sparse) 

Revision 2415 - (view) (download) (annotate) - [select for diffs]
Modified Thu Jul 9 07:51:05 2009 UTC (8 years, 5 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 5750 byte(s)
Diff to previous 2374
export (& doc) sparse.model.matrix()

Revision 2374 - (view) (download) (annotate) - [select for diffs]
Modified Mon May 18 14:40:09 2009 UTC (8 years, 7 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 5720 byte(s)
Diff to previous 2357
new rankMatrix()

Revision 2357 - (view) (download) (annotate) - [select for diffs]
Modified Mon Apr 6 15:53:51 2009 UTC (8 years, 8 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 5699 byte(s)
Diff to previous 2354
rid code of pre-2.9.0 if()s; also use 2.9.0-based tests/*.Rout.save where appropriate

Revision 2354 - (view) (download) (annotate) - [select for diffs]
Modified Mon Mar 30 15:31:23 2009 UTC (8 years, 8 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6418 byte(s)
Diff to previous 2351
more robust MatrixClass(); in C, use methods:::classEnv() via wrapper

Revision 2351 - (view) (download) (annotate) - [select for diffs]
Modified Wed Mar 25 10:41:05 2009 UTC (8 years, 8 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6395 byte(s)
Diff to previous 2341
use C-level Matrix_check_class_and_super(); adapt R code (and checks!) that work with class names similarly, using new MatrixClass()

Revision 2341 - (view) (download) (annotate) - [select for diffs]
Modified Mon Mar 2 17:53:13 2009 UTC (8 years, 9 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6266 byte(s)
Diff to previous 2326
misc.cleanup; mostly related to "all NA sparse mat."; see ChangeLog

Revision 2326 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jan 28 08:43:40 2009 UTC (8 years, 10 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6245 byte(s)
Diff to previous 2312
spqr()  |-> "SPQR" class

Revision 2312 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jan 10 14:01:26 2009 UTC (8 years, 11 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6209 byte(s)
Diff to previous 2245
new sparseMatrix(): construct *sorted* Csparse from un-sorted input, using modify-in-place under the hood

Revision 2245 - (view) (download) (annotate) - [select for diffs]
Modified Mon Aug 25 15:06:12 2008 UTC (9 years, 3 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6159 byte(s)
Diff to previous 2207
all.equal() methods; expand(<sparseLU>)

Revision 2207 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jul 7 22:34:52 2008 UTC (9 years, 5 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6139 byte(s)
Diff to previous 2203
M[...] <- "sparseVector" etc, see ChangeLog

Revision 2203 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jun 14 20:09:17 2008 UTC (9 years, 6 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6125 byte(s)
Diff to previous 2199
C based encodeInd() -> faster indexing; any()/all() for nsparse; printSpMatrix2(); show(<diag>)

Revision 2199 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jun 2 16:09:12 2008 UTC (9 years, 6 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6100 byte(s)
Diff to previous 2194
changes related to 2197; also one small step at reducing the ambiguity warnings

Revision 2194 - (view) (download) (annotate) - [select for diffs]
Modified Tue May 20 06:44:19 2008 UTC (9 years, 6 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6067 byte(s)
Diff to previous 2193
also import "Ops" (as of May 7 !)

Revision 2193 - (view) (download) (annotate) - [select for diffs]
Modified Mon May 5 06:56:21 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6062 byte(s)
Diff to previous 2175
less TODO; more "Done"

Revision 2175 - (view) (download) (annotate) - [select for diffs]
Modified Wed Apr 23 11:23:50 2008 UTC (9 years, 7 months ago) by mmaechler
Original Path: pkg/NAMESPACE
File length: 6038 byte(s)
Diff to previous 2157
more determinant(); MANY consistency cleanups, found by checkMatrix(); .. (see ChangeLog)

Revision 2157 - (view) (download) (annotate) - [select for diffs]
Modified Tue Mar 25 15:00:01 2008 UTC (9 years, 8 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5926 byte(s)
Diff to previous 2144
BunchKaufman(); fix <ddi> o <numeric> bug; Version++

Revision 2144 - (view) (download) (annotate) - [select for diffs]
Modified Tue Mar 18 23:08:12 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5903 byte(s)
Diff to previous 2142
.symDiagonal(), is.na() and more diagonalMatrix "Ops"

Revision 2142 - (view) (download) (annotate) - [select for diffs]
Modified Tue Mar 18 15:02:23 2008 UTC (9 years, 9 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 5825 byte(s)
Diff to previous 2115
update method for CHMfactor; change return type of exported C function chm_factor_update

Revision 2115 - (view) (download) (annotate) - [select for diffs]
Modified Sat Feb 23 09:23:17 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5793 byte(s)
Diff to previous 2112
+ forceSymmetric(); generalize ddense_to_symmetric to dense_to_s.. and ddense_band to dense_band allowing simplified methods;  Matrix() and many man/*Rd : replace many as(*, <specific>) by as(*, <virtual superclass>)

Revision 2112 - (view) (download) (annotate) - [select for diffs]
Modified Mon Feb 18 08:24:46 2008 UTC (9 years, 9 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5743 byte(s)
Diff to previous 2106
new symmpart(), skewpart()

Revision 2106 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jan 23 09:36:04 2008 UTC (9 years, 10 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5653 byte(s)
Diff to previous 2096
+ "Schur" class and many more Schur methods

Revision 2096 - (view) (download) (annotate) - [select for diffs]
Modified Fri Dec 7 17:44:44 2007 UTC (10 years ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5588 byte(s)
Diff to previous 2095
+ cov2cor(); updates to nearPD()+doc; others

Revision 2095 - (view) (download) (annotate) - [select for diffs]
Modified Wed Dec 5 17:57:24 2007 UTC (10 years ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5445 byte(s)
Diff to previous 2094
s/sxtabs/xtabs/ + fix + doc(incl example)

Revision 2094 - (view) (download) (annotate) - [select for diffs]
Modified Tue Dec 4 23:41:41 2007 UTC (10 years ago) by bates
Original Path: pkg/NAMESPACE
File length: 5446 byte(s)
Diff to previous 2072
Added sparse xtabs; not yet documented and may change

Revision 2072 - (view) (download) (annotate) - [select for diffs]
Modified Wed Sep 26 16:16:13 2007 UTC (10 years, 2 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5429 byte(s)
Diff to previous 2049
rcond() and qr.R() - unfinished (need TESTING; see FIXME)

Revision 2049 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 14 22:22:24 2007 UTC (10 years, 4 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 5414 byte(s)
Diff to previous 2048
Remove deprecated function writeHB and its methods; switch writeMM to use CHOLMOD code; repair readMM

Revision 2048 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 14 15:09:10 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5412 byte(s)
Diff to previous 2015
new nearPD() {from Jens` nearcor()}; some TODO cleanup

Revision 2015 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jul 25 14:17:24 2007 UTC (10 years, 4 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5395 byte(s)
Diff to previous 1947
(mostly) patches from Brian re potential changes in R-devel

Revision 1947 - (view) (download) (annotate) - [select for diffs]
Modified Thu Jul 5 08:22:00 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5332 byte(s)
Diff to previous 1933
printSpMatrix() {exported, extended, documented}

Revision 1933 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jun 30 09:05:11 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5308 byte(s)
Diff to previous 1922
add session- and hardware-info to Comparisons

Revision 1922 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jun 23 18:08:48 2007 UTC (10 years, 5 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5203 byte(s)
Diff to previous 1903
xsparseVector etc (smarter coercions)

Revision 1903 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jun 16 18:31:51 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5130 byte(s)
Diff to previous 1855
+ print(<sparse>, extra args)

Revision 1855 - (view) (download) (annotate) - [select for diffs]
Modified Wed May 23 21:33:34 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5061 byte(s)
Diff to previous 1852
export drop0() {name is open for discussion}; document colSums

Revision 1852 - (view) (download) (annotate) - [select for diffs]
Modified Mon May 21 16:42:35 2007 UTC (10 years, 6 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5067 byte(s)
Diff to previous 1846
sparseVector. <- v; rowSums/colSums; summary(<sparse>); spMatrix(.) utility

Revision 1846 - (view) (download) (annotate) - [select for diffs]
Modified Wed May 16 22:58:02 2007 UTC (10 years, 7 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5076 byte(s)
Diff to previous 1804
forgotten in last commit

Revision 1804 - (view) (download) (annotate) - [select for diffs]
Modified Tue Mar 27 16:44:46 2007 UTC (10 years, 8 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4814 byte(s)
Diff to previous 1799
omit cbind/rbind again, and use cBind/rBind only

Revision 1799 - (view) (download) (annotate) - [select for diffs]
Modified Sat Mar 24 14:54:00 2007 UTC (10 years, 8 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4772 byte(s)
Diff to previous 1751
+ diff(.), + "dim<-";  cBind/rBind + cbind/rbind; indexing fixes - current state

Revision 1751 - (view) (download) (annotate) - [select for diffs]
Modified Tue Jan 30 17:41:02 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4630 byte(s)
Diff to previous 1738
drop(); tweaks to Ops & indexing; Rsparse coercions for less exceptions in tests/Class+Meth.R

Revision 1738 - (view) (download) (annotate) - [select for diffs]
Modified Tue Jan 23 17:17:15 2007 UTC (10 years, 10 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4664 byte(s)
Diff to previous 1714
nnzero(), length(), "Ops" & "Logic", many more setAs(); misc.fixes

Revision 1714 - (view) (download) (annotate) - [select for diffs]
Modified Thu Dec 28 22:11:32 2006 UTC (10 years, 11 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4630 byte(s)
Diff to previous 1708
move Ops to new Ops.R; start using "Logic"

Revision 1708 - (view) (download) (annotate) - [select for diffs]
Modified Fri Dec 22 19:53:37 2006 UTC (10 years, 11 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4607 byte(s)
Diff to previous 1705
rbind2() / cbind2() methods fixes + new Auxiliaries

Revision 1705 - (view) (download) (annotate) - [select for diffs]
Modified Sat Dec 16 12:37:25 2006 UTC (11 years ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4584 byte(s)
Diff to previous 1654
any(), all() and "Compare"(<sparse>) - for release of 0.9975-7

Revision 1654 - (view) (download) (annotate) - [select for diffs]
Modified Fri Oct 27 16:58:15 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4828 byte(s)
Diff to previous 1642
miscellaneous "fixes" mostly in ChangeLog and/or related to diagonalMatrix

Revision 1642 - (view) (download) (annotate) - [select for diffs]
Modified Fri Oct 20 21:08:28 2006 UTC (11 years, 1 month ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4814 byte(s)
Diff to previous 1617
small changes related to "corMatrix" and other newly seen classes in tests/Class+Meth.R

Revision 1617 - (view) (download) (annotate) - [select for diffs]
Modified Fri Oct 6 15:42:12 2006 UTC (11 years, 2 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4797 byte(s)
Diff to previous 1548
sub-assign to diagonal => sparse; + new bdiag() function

Revision 1548 - (view) (download) (annotate) - [select for diffs]
Modified Mon Sep 11 22:13:07 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4781 byte(s)
Diff to previous 1513
new nMatrix and subclasses; lsparse change to have x slot; many consequences

Revision 1513 - (view) (download) (annotate) - [select for diffs]
Modified Tue Sep 5 13:16:23 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4487 byte(s)
Diff to previous 1507
re-add head() and tail() to exported methods

Revision 1507 - (view) (download) (annotate) - [select for diffs]
Modified Mon Sep 4 18:41:34 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4443 byte(s)
Diff to previous 1444
Merging changes from Matrix-nolmer branch

Revision 1444 - (view) (download) (annotate) - [select for diffs]
Modified Fri Aug 25 14:39:45 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5103 byte(s)
Diff to previous 1443
a bit more "MatrixFactorization" ..

Revision 1443 - (view) (download) (annotate) - [select for diffs]
Modified Fri Aug 25 10:44:48 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 5065 byte(s)
Diff to previous 1425
1st stab at "MatrixFactorization" class; exporting CHMfactor etc

Revision 1425 - (view) (download) (annotate) - [select for diffs]
Modified Wed Aug 23 21:25:32 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4740 byte(s)
Diff to previous 1407
Remove classes lCholCMatrix and dCholCMatrix, now using CHMfactor classes instead

Revision 1407 - (view) (download) (annotate) - [select for diffs]
Modified Mon Aug 21 15:24:47 2006 UTC (11 years, 3 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4691 byte(s)
Diff to previous 1396
rename class "LU" to "denseLU" and make "LU" virtual

Revision 1396 - (view) (download) (annotate) - [select for diffs]
Modified Sun Aug 20 03:17:19 2006 UTC (11 years, 3 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4666 byte(s)
Diff to previous 1389
Added methods for sparseQR for qr.qy, qr.qty, qr.coef, qr.resid and qr.fitted

Revision 1389 - (view) (download) (annotate) - [select for diffs]
Modified Fri Aug 18 13:53:33 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4541 byte(s)
Diff to previous 1383
export zapsmall(); define as.numeric and as.logical methods (not yet finished); fix printing "U" diagonal triangular sparse

Revision 1383 - (view) (download) (annotate) - [select for diffs]
Modified Thu Aug 17 13:57:53 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4473 byte(s)
Diff to previous 1380
add sparse LU and QR decompositions

Revision 1380 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 15 22:31:30 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4427 byte(s)
Diff to previous 1336
Adding dgCMatrix_{lusol,qrsol,QR} but QR still not working

Revision 1336 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jul 31 23:05:04 2006 UTC (11 years, 4 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4401 byte(s)
Diff to previous 1335
Add hatTrace function

Revision 1335 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jul 31 12:11:35 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4389 byte(s)
Diff to previous 1331
change unused class "correlation" to "corMatrix"

Revision 1331 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jul 22 17:59:53 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4391 byte(s)
Diff to previous 1328
many method cleanups; notably some "dgC" -> "Csparse" generaliztations

Revision 1328 - (view) (download) (annotate) - [select for diffs]
Modified Fri Jul 21 06:46:36 2006 UTC (11 years, 4 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4322 byte(s)
Diff to previous 1306
export isSymmetric()

Revision 1306 - (view) (download) (annotate) - [select for diffs]
Modified Thu Jul 6 15:14:12 2006 UTC (11 years, 5 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4356 byte(s)
Diff to previous 1280
Establish new class glmer; modify validity check on pedigree to account for nonparallel patterns of missingness in parents

Revision 1280 - (view) (download) (annotate) - [select for diffs]
Modified Tue May 23 08:01:44 2006 UTC (11 years, 6 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4347 byte(s)
Diff to previous 1268
useDynlib(*, .registration=TRUE)

Revision 1268 - (view) (download) (annotate) - [select for diffs]
Modified Wed May 17 17:42:09 2006 UTC (11 years, 7 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4370 byte(s)
Diff to previous 1258
lowerTriMatrix to tril, upperTriMatrix to triu, added band extractor

Revision 1258 - (view) (download) (annotate) - [select for diffs]
Modified Fri Apr 21 15:44:39 2006 UTC (11 years, 7 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4259 byte(s)
Diff to previous 1255
make pedigree class more memory-efficient; add pedigree()

Revision 1255 - (view) (download) (annotate) - [select for diffs]
Modified Wed Apr 19 14:16:59 2006 UTC (11 years, 7 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4241 byte(s)
Diff to previous 1247
Remove postVar generic and methods

Revision 1247 - (view) (download) (annotate) - [select for diffs]
Modified Thu Apr 13 11:12:51 2006 UTC (11 years, 8 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4252 byte(s)
Diff to previous 1243
pedigree class added

Revision 1243 - (view) (download) (annotate) - [select for diffs]
Modified Sun Apr 9 00:02:26 2006 UTC (11 years, 8 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4169 byte(s)
Diff to previous 1242
Added qqmath method for ranef.lmer and postVar for ranef methods

Revision 1242 - (view) (download) (annotate) - [select for diffs]
Modified Mon Apr 3 20:52:02 2006 UTC (11 years, 8 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4158 byte(s)
Diff to previous 1234
Added a qqmath method for the ranef.lmer class.

Revision 1234 - (view) (download) (annotate) - [select for diffs]
Modified Tue Mar 21 12:33:28 2006 UTC (11 years, 8 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4109 byte(s)
Diff to previous 1222
Change name of lmer.ranef class to ranef.lmer, add coef.lmer and update plot methods for these classes

Revision 1222 - (view) (download) (annotate) - [select for diffs]
Modified Tue Mar 7 11:05:08 2006 UTC (11 years, 9 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4083 byte(s)
Diff to previous 1199
lmer(): non-trivial summary() method -> summary.*mer classes

Revision 1199 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jan 23 15:02:13 2006 UTC (11 years, 10 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4052 byte(s)
Diff to previous 1175
export RsparseMatrix

Revision 1175 - (view) (download) (annotate) - [select for diffs]
Modified Tue Jan 17 23:41:36 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 4028 byte(s)
Diff to previous 1174
Munging the data frame

Revision 1174 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jan 16 20:03:48 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 4028 byte(s)
Diff to previous 1168
make Matrix() "smart" -- with help of quite a few new setAs(. , .) settings

Revision 1168 - (view) (download) (annotate) - [select for diffs]
Modified Mon Jan 16 14:40:39 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 3991 byte(s)
Diff to previous 1166
Modifications to propagate column names from an mer object to a VarCorr summary

Revision 1166 - (view) (download) (annotate) - [select for diffs]
Modified Sun Jan 15 19:18:20 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 3992 byte(s)
Diff to previous 1165
modifications to lmer and related classes

Revision 1165 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jan 14 23:41:55 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3979 byte(s)
Diff to previous 1163
new coercion to dtr* and dsy* using isSymmetric() and isTriangular(); fix validity checking; some class descriptions

Revision 1163 - (view) (download) (annotate) - [select for diffs]
Modified Sat Jan 14 23:13:20 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3890 byte(s)
Diff to previous 1157
export comp*- and general- Matrix classes

Revision 1157 - (view) (download) (annotate) - [select for diffs]
Modified Thu Jan 12 23:41:20 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 3848 byte(s)
Diff to previous 1150
Don't use .registration in useDynLib until 2.3.0 has been released

Revision 1150 - (view) (download) (annotate) - [select for diffs]
Modified Thu Jan 12 03:41:25 2006 UTC (11 years, 11 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 3803 byte(s)
Diff to previous 1127
Switch to supernodal Cholesky representation of mer objects

Revision 1127 - (view) (download) (annotate) - [select for diffs]
Modified Tue Jan 10 18:11:23 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3800 byte(s)
Diff to previous 1109
add ", drop = FALSE" in lmer.coef constructions; plus a few comments

Revision 1109 - (view) (download) (annotate) - [select for diffs]
Modified Tue Jan 3 16:42:31 2006 UTC (11 years, 11 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3760 byte(s)
Diff to previous 986
"diagonalMatrix" class and subclasses with a few methods; very basic "ltTMatrix" methods

Revision 986 - (view) (download) (annotate) - [select for diffs]
Modified Fri Oct 21 19:36:30 2005 UTC (12 years, 1 month ago) by bates
Original Path: pkg/NAMESPACE
File length: 3659 byte(s)
Diff to previous 956
Remove references to mer2 and mltloc.rda which are now in a branch

Revision 956 - (view) (download) (annotate) - [select for diffs]
Modified Fri Sep 30 17:28:00 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3675 byte(s)
Diff to previous 946
more coercions; particularly "d" <-> "l"; more tests (and more FIXMEs!); fixing two "index-0 bugs"; ...

Revision 946 - (view) (download) (annotate) - [select for diffs]
Modified Wed Sep 28 08:56:42 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3624 byte(s)
Diff to previous 940
some "Summary" methods; some "Compare" group methods; logical dense matrices

Revision 940 - (view) (download) (annotate) - [select for diffs]
Modified Tue Sep 27 00:50:35 2005 UTC (12 years, 2 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 3471 byte(s)
Diff to previous 937
Temporary function mer2 to experiment with CHOLMOD-based mixed-effects

Revision 937 - (view) (download) (annotate) - [select for diffs]
Modified Tue Sep 20 10:16:13 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3467 byte(s)
Diff to previous 925
export more non-Primitive group generics

Revision 925 - (view) (download) (annotate) - [select for diffs]
Modified Mon Sep 19 19:01:31 2005 UTC (12 years, 2 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3324 byte(s)
Diff to previous 923
too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for sparse ones; more  "s/gTMatrix/TsparseMatrix/" fixes; quite a few more tests, incl some for *all* classes

Revision 923 - (view) (download) (annotate) - [select for diffs]
Modified Sun Sep 18 23:41:45 2005 UTC (12 years, 2 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 3158 byte(s)
Diff to previous 908
More progress on incorporating CHOLMOD - still not passing CMD check

Revision 908 - (view) (download) (annotate) - [select for diffs]
Modified Thu Sep 8 15:30:08 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3110 byte(s)
Diff to previous 888
cbind() / cbind2() methods for R >= 2.2.0

Revision 888 - (view) (download) (annotate) - [select for diffs]
Modified Thu Sep 1 13:46:21 2005 UTC (12 years, 3 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2994 byte(s)
Diff to previous 886
New simulate method for lmer objects

Revision 886 - (view) (download) (annotate) - [select for diffs]
Modified Wed Aug 31 17:49:47 2005 UTC (12 years, 3 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 2993 byte(s)
Diff to previous 878
new classes "index", "symmetricM*" and "triangularM*"; indexing for logical and character indices; new tests; more to do

Revision 878 - (view) (download) (annotate) - [select for diffs]
Modified Sun Aug 28 13:57:39 2005 UTC (12 years, 3 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 3071 byte(s)
Diff to previous 851
Add simulate method for lmer

Revision 851 - (view) (download) (annotate) - [select for diffs]
Modified Tue Aug 16 17:39:38 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3086 byte(s)
Diff to previous 848
export  dgR*, dsR* & dtR* Matrix - and "fix" stubs

Revision 848 - (view) (download) (annotate) - [select for diffs]
Modified Thu Aug 11 07:41:59 2005 UTC (12 years, 4 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 3002 byte(s)
Diff to previous 835
+"denseMatrix" class; export defined but unused classes

Revision 835 - (view) (download) (annotate) - [select for diffs]
Modified Mon Aug 8 13:33:18 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2835 byte(s)
Diff to previous 825
Add writeHB and writeMM methods and generic

Revision 825 - (view) (download) (annotate) - [select for diffs]
Modified Sun Aug 7 15:22:33 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2799 byte(s)
Diff to previous 820
Harwell-Boeing and MatrixMarket formats

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Modified Wed Jul 27 23:07:04 2005 UTC (12 years, 4 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2765 byte(s)
Diff to previous 772
Version 0.98-1

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Modified Thu Jun 9 16:57:55 2005 UTC (12 years, 6 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2688 byte(s)
Diff to previous 769
Prepare for release 0.96-1

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Modified Wed Jun 8 23:47:45 2005 UTC (12 years, 6 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2703 byte(s)
Diff to previous 734
Moving lmer to the Matrix package

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Modified Tue May 17 17:18:54 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2229 byte(s)
Diff to previous 718
Adding logical sparse matrix methods

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Modified Mon May 9 01:24:35 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2199 byte(s)
Diff to previous 715
Getting ready for a release

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Modified Fri May 6 23:52:53 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1910 byte(s)
Diff to previous 702
Added colSums and friends for dgeMatrix class

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Modified Thu Apr 21 13:00:36 2005 UTC (12 years, 7 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1808 byte(s)
Diff to previous 692
Moving Doxyfile

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Modified Mon Apr 18 14:34:33 2005 UTC (12 years, 8 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1781 byte(s)
Diff to previous 676
Release 0.95-6

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Modified Sat Mar 26 15:59:18 2005 UTC (12 years, 8 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 1828 byte(s)
Diff to previous 665
+ virtual "sparseMatrix" classes

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Modified Thu Mar 24 13:06:09 2005 UTC (12 years, 8 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2151 byte(s)
Diff to previous 664
Removing the ssclme and sscCrosstab classes

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Modified Thu Mar 24 13:00:09 2005 UTC (12 years, 8 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 2367 byte(s)
Diff to previous 658
make virtual classes "VIRTUAL"

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Modified Thu Mar 17 17:52:06 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 2439 byte(s)
Diff to previous 652
+ as.matrix() + unname() method

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Modified Wed Mar 16 01:08:36 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2412 byte(s)
Diff to previous 640
Updates to multiplication and other methods

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Modified Tue Mar 15 00:44:13 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2354 byte(s)
Diff to previous 631
permutation matrix class

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Modified Sun Mar 13 04:34:52 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2356 byte(s)
Diff to previous 597
Add BunchKaufman factorization

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Modified Thu Mar 3 19:58:59 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2326 byte(s)
Diff to previous 595
Methods and coercions for the dtpMatrix class

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Modified Thu Mar 3 05:18:11 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2385 byte(s)
Diff to previous 579
Remove pdfactor class

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Modified Sun Feb 27 00:04:16 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 2384 byte(s)
Diff to previous 573
dimnames(), "dimnames() <-", better t(), etc

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Modified Sat Feb 26 18:06:08 2005 UTC (12 years, 9 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 2330 byte(s)
Diff to previous 561
more group methods and testing them

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Modified Fri Feb 18 19:24:43 2005 UTC (12 years, 9 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2196 byte(s)
Diff to previous 546
Release 0.95-1

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Modified Tue Feb 15 22:09:12 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 2188 byte(s)
Diff to previous 542
Methods and coercions for the dtTMatrix class

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Modified Thu Feb 10 17:30:10 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 2134 byte(s)
Diff to previous 538
"Arith" group methods work!

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Modified Thu Feb 10 13:50:27 2005 UTC (12 years, 10 months ago) by maechler
Original Path: pkg/NAMESPACE
File length: 1987 byte(s)
Diff to previous 495
add @Dimnames (-> new "mm")

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Modified Thu Feb 3 18:48:31 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1741 byte(s)
Diff to previous 482
Initial implementation of the Schur generic

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Modified Wed Feb 2 15:37:31 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1702 byte(s)
Diff to previous 459
renaming and rearranging classes

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Modified Sat Jan 29 14:08:22 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1616 byte(s)
Diff to previous 448
Preparation for new release

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Modified Fri Jan 21 21:59:45 2005 UTC (12 years, 10 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1579 byte(s)
Diff to previous 418
Release 0.8-23

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Modified Mon Jan 3 19:16:36 2005 UTC (12 years, 11 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1630 byte(s)
Diff to previous 410
Change to the lmer representation

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Modified Tue Dec 28 14:51:42 2004 UTC (12 years, 11 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1654 byte(s)
Diff to previous 348
Working on the lmer classes

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Modified Tue Nov 23 15:38:31 2004 UTC (13 years ago) by bates
Original Path: pkg/NAMESPACE
File length: 1632 byte(s)
Diff to previous 342
add blocked crosstabulations

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Modified Mon Nov 15 13:55:52 2004 UTC (13 years, 1 month ago) by bates
Original Path: pkg/NAMESPACE
File length: 1632 byte(s)
Diff to previous 298
Updates for factorization name and default value

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Modified Fri Oct 8 13:47:20 2004 UTC (13 years, 2 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1534 byte(s)
Diff to previous 291
added validate functions

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Modified Sun Oct 3 21:51:33 2004 UTC (13 years, 2 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1526 byte(s)
Diff to previous 273
Release 0.8-15

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Modified Thu Sep 2 23:14:16 2004 UTC (13 years, 3 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1549 byte(s)
Diff to previous 255
Add cscBlocked

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Modified Fri Aug 20 16:27:15 2004 UTC (13 years, 3 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1521 byte(s)
Diff to previous 241
Add the lmeRep class

Revision 241 - (view) (download) (annotate) - [select for diffs]
Modified Wed Jul 7 18:23:11 2004 UTC (13 years, 5 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1497 byte(s)
Diff to previous 10
Remove pdMat classes

Revision 10 - (view) (download) (annotate) - [select for diffs]
Added Mon Mar 22 20:20:05 2004 UTC (13 years, 8 months ago) by bates
Original Path: pkg/NAMESPACE
File length: 1743 byte(s)
Initial import

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