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Diff of /pkg/ChangeLog

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revision 350, Tue Nov 23 15:39:45 2004 UTC revision 692, Mon Apr 18 14:34:33 2005 UTC
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1    2005-04-18  Douglas Bates  <bates@bates1-home>
2    
3            * src/lgCMatrix.[ch]: code for _validate method and stub for
4            multiplication operation.
5    
6            * src/dgeMatrix.c (dgeMatrix_matrix_solve): Passing wrong argument
7            to dgetrs.
8    
9            * src/init.c: Fix cut-and-paste error in definition of
10            dgeMatrix_matrix_solve
11    
12            * src/{many files}: Tighten code by using ALLOC_SLOT.
13    
14    2005-04-15  Douglas Bates  <bates@bates1-home>
15    
16            * R/AllClass.R: Add lgTMatrix and lgCMatrix classes
17    
18            * DESCRIPTION: Eliminate import of stats.
19    
20    
21    2005-04-06  Douglas Bates  <bates@bates1-home>
22    
23            * R/AllClass.R : add logical sparse matrix classes
24    
25    2005-04-01  Martin Maechler  <maechler@stat.math.ethz.ch>
26    
27            * R/dgTMatrix.R: add "[" method for triplet matrices
28            * R/sparseMatrix.R: and other sparse ones; --> add show() for sparse
29    
30    2005-03-31  Douglas Bates  <bates@bates1-home>
31    
32            * DESCRIPTION (Version): release 0.95-5 to CRAN
33    
34            * R/dMatrix.R: add %*%, crossprod and solve "fallback" methods
35            * R/sparseMatrix.R: %*%, crossprod()
36            * R/dgeMatrix.R: more "fallback" methods for numeric/dense matrices
37            * man/*.Rd: move method definitions to 'Matrix' and 'dMatrix'
38            * src/lmer.c (lmer_fitted): fix thinko
39    
40    2005-03-26  Martin Maechler  <maechler@stat.math.ethz.ch>
41    
42            * R/AllClass.R: add two virtual sparse classes ``on top''
43    
44    2005-03-24  Martin Maechler  <maechler@stat.math.ethz.ch>
45    
46            * R/AllClass.R (setClass): use "VIRTUAL" for the virtual classes;
47                    correspondingly fix examples and tests/ since new()
48                    doesn't work for virtual classes.
49    
50    2005-03-17  Martin Maechler  <maechler@stat.math.ethz.ch>
51    
52            * R/Matrix.R (as.matrix): method and one for unname()
53            * tests/dpoMatrix.R: tests should now be less platform dependent;
54              also run for R 2.1.0; using as.matrix()
55    
56    2005-03-15  Douglas Bates  <bates@bates1-home>
57    
58            * R/pMatrix.R: "pMatrix" class added
59            * ....
60    
61    2005-03-14  Douglas Bates  <bates@bates1-home>
62    
63            * R/dtpMatrix.R: Add unpack method and an example.
64    
65            * src/dsyMatrix.c (dsyMatrix_trf): Add BunchKaufman factorization
66            of general symmetric matrices and associated S4 methods.
67    
68    2005-03-10  Martin Maechler  <maechler@stat.math.ethz.ch>
69            +
70    2005-03-05  Martin Maechler  <maechler@stat.math.ethz.ch>
71    
72            * R/dgeMatrix.R (setAs): and many other files: more coercion,
73              crossprod() and "%*%" methods added; tests, too.
74            * tests/matprod.R: new, for testing these
75    
76    2005-03-03  Douglas Bates  <bates@bates1-home>
77    
78            * src/lmer.c (lmer_fitted): Added.
79    
80    2005-03-02  Douglas Bates  <bates@bates1-home>
81    
82            * R/dsTMatrix.R: Conversion from dsTMatrix to dsCMatrix
83    
84    2005-02-28  Douglas Bates  <bates@bates1-home>
85    
86            * src/*.c,po/,inst/po: Internationalization and localization of
87            the package.
88    
89            * src/ldl.[ch]: Removed these as their contents are referenced in the
90            R_ldl.c file.
91    
92            * src/flame.[ch]: Removed these source files.
93    
94            * src/dtrMatrix.c (make_array_triangular): Move to Mutils
95    
96            * src/LU.[ch],src/init.c: absorb in factorizations
97    
98            * src/Mutils.h: prepare for internationalization
99    
100            * src/cblas.h: move the enum definitions to Mutils.h and remove
101            this file
102    
103    2005-02-26  Martin Maechler  <maechler@stat.math.ethz.ch>
104    
105            * R/dgeMatrix.R: provide "dimnames" and "dimnames<-" methods
106    
107            * R/dtrMatrix.R: fix t() method
108    
109            * R/dgeMatrix.R: define group methods "Arith", "Math", "Math2"
110            * NAMESPACE: export them (and import generics from "methods")
111            * tests/group-methods.R : and test them.
112    
113            * src/dtrMatrix.c (dtrMatrix_as_dgeMatrix): prevent seg.fault in
114            border case
115    
116    2005-02-24  Douglas Bates  <bates@stat.wisc.edu>
117    
118            * DESCRIPTION (Version): 0.95-2  released to CRAN
119    
120            * src/dgBCMatrix.c:
121            * src/lmer.c: many changes
122            * ...
123    
124    2005-02-04  Martin Maechler  <maechler@stat.math.ethz.ch>
125    
126            * R/Matrix.R: add more sophisticated show() method.
127    
128    2005-02-02  Douglas Bates  <bates@stat.wisc.edu>
129    
130            * */* : almost complete reorganization of classes.
131    
132    2005-01-26  Douglas Bates  <bates@bates7>
133    
134            * R/AllGeneric.R: Added matrix exponential generic expm and a method
135            for the geMatrix class.
136    
137    2005-01-24  Douglas Bates  <bates@bates7>
138    
139            * src/Makefile (clean): Remove *.a and *.so
140    
141            * man/cscBlocked-class.Rd: Remove reference to the lmer-class.
142    
143    2005-01-23  Douglas Bates  <bates@bates7>
144    
145            * src/lmer.c (Lind): Definition of Lind was backwards.  This only
146            had an effect in cases with more than 2 grouping factors.
147    
148    2005-01-03  Douglas Bates  <bates@bates1-home>
149    
150            * src/lmeRep.c (lmer_variances): change from lmeRep to lmer
151    
152    2004-12-23  Douglas Bates  <bates@bates1-home>
153    
154            * src/init.c (R_init_Matrix): Reorder calls to R_registerRoutines
155            and R_useDynamicSymbols (suggested by B.D.Ripley).
156    
157    2004-12-14  Douglas Bates  <bates@bates1-home>
158    
159            * R/sscMatrix.R: Add determinant methods
160    
161            * src/triplet.[ch],src/init.c (triplet_to_matrix): Add a coercion
162            for tripletMatrix to matrix.
163    
164    2004-12-13  Douglas Bates  <bates@bates1-home>
165    
166            * R/AllClass.R (.onLoad): Eliminate the bbCrosstab class, which is
167            no longer used.
168    
169            * src/R_ldl.c: Created an R-specific version of the ldl.[ch] files
170            with dynamic allocation of scratch arrays.
171    
172            * src/ssclme.c (ssclme_copy_ctab): Fixed bug in creation of ZtZ
173            for multivariate random effects with multiple grouping factors.
174            Fixes part but not all of #15.
175    
176    2004-12-03  Douglas Bates  <bates@bates1-home>
177    
178            * src/lmeRep.c (lmeRep_factor): order of operations for multiple
179            scalar grouping factors corrected.
180    
181    2004-11-29  Douglas Bates  <bates@bates1-home>
182    
183            * src/bCrosstab.c: remove diag_update which is no longer used
184    
185  2004-11-16  Douglas Bates  <bates@bates1-home>  2004-11-16  Douglas Bates  <bates@bates1-home>
186    
187          * src/Metis_utils.c: Move metis.h include to C sources so that the          * src/Metis_utils.c: Move metis.h include to C sources so that the

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