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Diff of /pkg/ChangeLog

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revision 1932, Fri Jun 29 16:43:47 2007 UTC revision 2005, Wed Jul 18 14:46:20 2007 UTC
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1    2007-07-18  Martin Maechler  <maechler@stat.math.ethz.ch>
2    
3            * man/dpoMatrix-class.Rd: added 'corMatrix' example
4    
5            * src/dsyMatrix.[ch] (dsyMatrix_as_matrix): new 'keep_dimnames' arg
6            * src/dtrMatrix.[ch] (dtrMatrix_as_matrix): ditto
7            * src/init.c, R/dsyMatrix.R, R/dtrMatrix.R, R/lgTMatrix.R: ditto
8    
9            * R/lsparseMatrix.R: bug fix in "all" method
10            * R/Ops.R (.do.Logic.lsparse): "|" bug in borderline case
11    
12            * R/dsyMatrix.R (coerce->dsTMatrix): (i,j) slots should *not* have names
13            * R/ngTMatrix.R (coerce->ngTMatrix): ditto;
14                    + matrix |-> nMatrix coercion
15            * R/pMatrix.R: + setAs()  to dMatrix and from nMatrix
16            * man/pMatrix-class.Rd: ditto
17    
18            * R/Matrix.R (Summary): method for non-dMatrix
19    
20            * tests/Class+Meth.R (extraValid): new check about "dirty" slots
21            * tests/Class+Meth.R (tstMatrixClass): test norm(.);
22                    test all Summary methods.
23    
24    2007-07-16  Martin Maechler  <maechler@stat.math.ethz.ch>
25    
26            * R/dgeMatrix.R (norm, rcond): methods for 'matrix'
27    
28    2007-07-14  Martin Maechler  <maechler@stat.math.ethz.ch>
29    
30            * R/sparseMatrix.R (norm): simple methods for sparseMatrix
31    
32            * R/pMatrix.R (t?crossprod): methods for pMatrix
33    
34    2007-07-10  Douglas Bates  <bates@stat.wisc.edu>
35    
36            * src/dgeMatrix.c (dgeMatrix_colsums): Get the logic straight.
37    
38    2007-07-09 20:45  Douglas Bates <bates@stat.wisc.edu>
39    
40            * [r4579] src/dgeMatrix.c: Untangle horrible code in dgeMatrix_colsums
41              trying to fix a subtle bug - which has been somewhere else.
42    
43    2007-07-09 19:43  Martin Maechler <maechler@stat.math.ethz.ch>
44    
45            * [r4578] src/dgeMatrix.c: "cleaned" dgeMatrix_colsums() - but did not
46              solve the bug
47    
48    2007-07-08  Martin Maechler  <maechler@stat.math.ethz.ch>
49    
50            * src/dgCMatrix.c (compressed_to_TMatrix):
51    
52    2007-07-07  Martin Maechler  <maechler@stat.math.ethz.ch>
53    
54            * src/Csparse.c (Rsparse_validate): new, to have some validity
55            checking for RsparseMatrix
56            * src/dgCMatrix.c (xRMatrix_validate): ditto
57            * src/dtCMatrix.c (tRMatrix_validate): ditto
58    
59    2007-07-07  Douglas Bates <bates@stat.wisc.edu>
60    
61            * [r4567] R/AllClass.R: Slots already in RsparseMatrix were redefined in
62              lgRMatrix
63            * [r4568] DESCRIPTION: Prepare for bug-fix release
64            * [r4570] src/CHOLMOD/Check/cholmod_write.c: Include cholmod_matrixops.h
65              for declaration of cholmod_symmetry
66    
67    2007-07-06  Martin Maechler  <maechler@stat.math.ethz.ch>
68    
69            * DESCRIPTION (Version): 0.999375 merged into the trunk; ready for
70            release.
71    
72    2007-07-06 14:11  Douglas Bates <bates@stat.wisc.edu>
73    
74            * [r4559] src/iohb.c, src/iohb.h: Remove Harwell-Boeing input/output
75              functions - no longer used
76            * [r4560] src/HBMM.c, src/Mutils.c, src/dgTMatrix.c, src/dgeMatrix.c,
77              src/dspMatrix.c, src/dsyMatrix.c, src/dtCMatrix.c,
78              src/factorizations.c, src/sparseQR.c: Replace most calls to Calloc by
79              Alloca
80    
81    2007-07-06 13:14  Martin Maechler <maechler@stat.math.ethz.ch>
82    
83            * [r4558] inst/doc/Comparisons.Rnw, src/CHMfactor.c, src/Csparse.c,
84              src/Tsparse.c, src/chm_common.c, src/chm_common.h, src/dense.c,
85              src/dgCMatrix.c, src/dsCMatrix.c, src/dtTMatrix.c, src/sparseQR.c,
86              src/t_gCMatrix_colSums.c: more R_CheckStack()s
87    
88    2007-07-05 18:12  Douglas Bates <bates@stat.wisc.edu>
89    
90            * [r4550] inst/include/Matrix.h: Add the macro N_AS_CHM_DN to "alloca"
91              the required amount of memory then call M_numeric_as_chm_dense.
92            * [r4556] src/Mutils.h, src/dgCMatrix.c: Define and use the Alloca macro
93              (like Calloc but calling alloca)
94    
95    2007-07-05  Martin Maechler  <maechler@stat.math.ethz.ch>
96    
97            * R/sparseMatrix.R (printSpMatrix): renamed from prSpMatrix()
98            and extended with more sophisticated 'col.names' option.
99            * NAMESPACE: export  printSparseMatrix()
100            * man/printSpMatrix.Rd: document, incl. examples
101    
102    2007-07-04 16:21  Douglas Bates <bates@stat.wisc.edu>
103    
104            * [r4543] src/cs_utils.c, src/cs_utils.h, src/dgCMatrix.c,
105              src/dtCMatrix.c, src/sparseQR.c: CSP typedef for *cs and macro
106              AS_CSP. API change - pass the empty structure to Matrix_as_cs.
107    
108    2007-07-04  Martin Maechler  <maechler@stat.math.ethz.ch>
109    
110            * DESCRIPTION (Version): 0.99875-4
111    
112            * tests/Class+Meth.R (tstMatrixClass): add dimnames, and hence test
113            some dimnames perservation.
114    
115            * R/dsTMatrix.R (t-method): keep dimnames
116            * R/dtTMatrix.R:  ditto
117    
118            * R/sparseMatrix.R (prSpMatrix): print colnames when non-trivial
119            and ncol(.) < 10
120    
121            * src/cs_utils.c: drop check_class() and use Matrix_check_class()
122            from Mutils.h
123    
124            * src/lgCMatrix.c ([ln]csc_to_matrix): no longer lose dimnames,
125            e.g. in as(<ngCMatrix>, "matrix")
126    
127    2007-07-01 13:27  Douglas Bates <bates@stat.wisc.edu>
128    
129            * [r4529] .: Create a branch for the API changes from the 0.99875
130              series to the 0.999375 series
131            * [r4530] DESCRIPTION, inst/include/Matrix.h,
132              inst/include/Matrix_stubs.c, src/CHMfactor.c, src/Csparse.c,
133              src/Mutils.h, src/Tsparse.c, src/chm_common.c, src/chm_common.h,
134              src/dense.c, src/dgCMatrix.c, src/dsCMatrix.c, src/dtTMatrix.c,
135              src/t_gCMatrix_colSums.c: API change - pass the empty structure to the
136              as_cholmod_x functions
137    
138    2007-06-30 09:05  Martin Maechler <maechler@stat.math.ethz.ch>
139    
140            * [r4527] trunk/Matrix/DESCRIPTION, trunk/Matrix/NAMESPACE,
141              trunk/Matrix/inst/doc/Comparisons.Rnw: add session- and hardware-info
142              to Comparisons
143    
144    >>>>>>> .merge-right.r4561
145  2007-06-29  Martin Maechler  <maechler@stat.math.ethz.ch>  2007-06-29  Martin Maechler  <maechler@stat.math.ethz.ch>
146    
147          * DESCRIPTION (Version): 0.99875-3 ready to be released.          * DESCRIPTION (Version): 0.99875-3 ready to be released.

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