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revision 1847, Sat May 19 19:23:28 2007 UTC revision 1911, Tue Jun 19 16:16:58 2007 UTC
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1    2007-06-19  Martin Maechler  <maechler@stat.math.ethz.ch>
2    
3            * R/colSums.R: new file for all (col|row)(Sums|Means) methods,
4              notably the new ones building on the new .Call(.)s:
5    
6            * src/dgCMatrix.c (DEF_gCMatrix_COLSUMS): use to define
7            all 4 of [dlin]gCMatrix_colSums().
8    
9    2007-06-18 16:12  Douglas Bates <bates@stat.wisc.edu>
10    
11            * [r4472] src/Syms.h, src/init.c: Added Matrix_lengthSym
12            * [r4473] src/dgCMatrix.c: Modified dgCMatrix_colSums for sparseVector
13              result
14    
15    2007-06-16  Martin Maechler  <maechler@stat.math.ethz.ch>
16    
17            * R/kronecker.R: fix typo (could lead to inf.recursion)
18            * test/simple.R: testing that
19    
20            * R/sparseMatrix.R (prSpMatrix): change to be used as print()
21            method (which can have arguments, show() can't).
22    
23    2007-06-16 15:52  Douglas Bates <bates@stat.wisc.edu>
24    
25            * [r4466] R/dgCMatrix.R, src/dgCMatrix.c, src/dgCMatrix.h, src/init.c:
26              added dgCMatrix_colSums for [col,row][Sums,Means]
27    
28    2007-06-15 23:15  Douglas Bates <bates@stat.wisc.edu>
29    
30            * [r4460] R/sparseMatrix.R, man/dgCMatrix-class.Rd, src/dgCMatrix.c,
31              src/dgCMatrix.h, src/init.c: added lm.fit.sparse (unexported),
32              coercion of "factor" to "dgCMatrix" and dgCMatrix_cholsol
33            * [r4461] R/AllClass.R, man/sparseMatrix-class.Rd: draft "indicators"
34              class
35            * [r4463] R/sparseMatrix.R, man/dgCMatrix-class.Rd,
36              man/sparseMatrix-class.Rd: Don't need an "indicators" class - use the
37              row names to store the levels - duh!  Added an example.
38    
39    2007-06-14  Martin Maechler  <maechler@stat.math.ethz.ch>
40    
41            * src/Csparse.c (Csparse_validate): check for *repeated* entries
42            thanks to example from Christian Buchta; with a test here:
43            * tests/simple.R:
44    
45    2007-06-07  Martin Maechler  <maechler@stat.math.ethz.ch>
46    
47            * R/Auxiliaries.R (callGeneric): another fix, needed for some cases
48            of colSums(*, sparseResult = TRUE)
49    
50    2007-06-06  Martin Maechler  <maechler@stat.math.ethz.ch>
51    
52            * R/lsparseMatrix.R, R/ldenseMatrix.R (all, any): change default to
53            'na.rm = FALSE' as "everywhere" else in R.
54    
55    2007-06-05 Douglas Bates <bates@stat.wisc.edu>
56    
57            * [r4421] src/CSparse_install.sh: Modify for new organization of
58              CSparse package
59            * [r4425] src/UFsparse_download.sh: Update to version 3.0.0 of
60              SuiteSparse
61            * [r4426] src/Makefile: add ./UFconfig to the include path for
62              compilation
63            * [r4427] src/cs.[ch]: update to CSparse version 2.2.0
64            * [r4428] inst/doc/UFsparse/* src/{AMD,CHOLMOD,COLAMD}/*
65              src/UFconfig/UFconfig.h: Update to version 3.0.0 of SuiteSparse
66    
67    2007-06-05  Martin Maechler  <maechler@stat.math.ethz.ch>
68    
69            * R/Auxiliaries.R (emptyColnames): + argument msg.if.not.empty, used in
70            * R/sparseMatrix.R (prSpMatrix): now gives a message about
71            suppressed column names.
72    
73    2007-06-04 17:13  Douglas Bates <bates@stat.wisc.edu>
74    
75            * [r4418] src/Csparse.c, src/HBMM.c, src/Mutils.c, src/Mutils.h,
76              src/Tsparse.c, src/chm_common.c, src/chm_common.h, src/dgCMatrix.c,
77              src/dgeMatrix.c, src/dpoMatrix.c, src/dpoMatrix.h, src/dppMatrix.c,
78              src/dppMatrix.h, src/dsCMatrix.c, src/dspMatrix.c, src/dspMatrix.h,
79              src/dsyMatrix.c, src/dsyMatrix.h, src/dtpMatrix.c, src/dtrMatrix.c:
80              Remove warnings after change to const char* CHAR
81    
82    2007-06-04 17:11  Douglas Bates <bates@stat.wisc.edu>
83    
84            * [r4417] inst/include/Matrix_stubs.c, inst/include/cholmod.h: Corrected
85              type of M_cholmod_ssmult
86    
87    2007-06-03 14:42  Douglas Bates <bates@stat.wisc.edu>
88    
89            * [r4412] inst/include/Matrix_stubs.c, inst/include/cholmod.h,
90              src/init.c: Yet another cholmod export - cholmod_ssmult
91    
92    2007-05-23  Martin Maechler  <maechler@stat.math.ethz.ch>
93    
94            * NAMESPACE: exported drop0(), since
95            * man/drop0.Rd: I have seen several cases, I really wanted to use
96            it, so our users may want too.
97    
98    2007-05-22  Martin Maechler  <maechler@stat.math.ethz.ch>
99    
100            * man/colSums.Rd: separately document colSums() etc, since these
101            have the extra argument 'sparseResult'.
102    
103    2007-05-21  Martin Maechler  <maechler@stat.math.ethz.ch>
104    
105            * R/sparseMatrix.R (spMatrix): utility (T)sparse Matrix constructor;
106            * man/spMatrix.Rd: docu., including examples
107    
108            * R/Auxiliaries.R (sp.colMeans): etc, using a patched callGeneric(),
109            in order to make colMeans() etc fast *and* correct.
110            * R/sparseVector.R (replSPvec): "[<-" functionality for
111            sparseVectors; tested in
112            * tests/simple.R:
113    
114    2007-05-19  Martin Maechler  <maechler@stat.math.ethz.ch>
115    
116            * R/sparseMatrix.R (print.sparseSummary): and summary() method for
117            (very) sparse Matrices; output similar to Matlab's print().
118    
119  2007-05-17  Douglas Bates  <bates@stat.wisc.edu>  2007-05-17  Douglas Bates  <bates@stat.wisc.edu>
120    
121          * src/HBMM.c (Matrix_writeMatrixMarket): Write 1-based, not          * src/HBMM.c (Matrix_writeMatrixMarket): Write 1-based, not

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