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Diff of /pkg/ChangeLog

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revision 1577, Mon Sep 18 21:01:45 2006 UTC revision 1641, Fri Oct 20 15:04:40 2006 UTC
# Line 1  Line 1 
1    2006-10-19  Douglas Bates  <bates@stat.wisc.edu>
2    
3            * src/chm_common.h: Add R_cholmod_start to initialize cholmod to
4            use Rprintf and R's error handling.
5    
6    2006-10-17  Martin Maechler  <maechler@stat.math.ethz.ch>
7    
8            * R/diagMatrix.R (%*%): rep(*, each = .) in Matrix %*% diagonal.
9            * tests/matprod.R: add tests for the bug fixed.
10    
11    2006-10-11  Douglas Bates  <bates@stat.wisc.edu>
12    
13            * src/HBMM.[ch]: remove HarwellBoeing format for writing.
14            * src/SOURCES_C.mkf (SOURCES_C): no longer compile iohb.c
15    
16    2006-10-06  Douglas Bates  <bates@stat.wisc.edu>
17    
18            * R/d[gs]CMatrix.R: deprecate the writeHB function.  Use writeMM instead.
19    
20    2006-10-06  Martin Maechler  <maechler@stat.math.ethz.ch>
21    
22            * DESCRIPTION (Version): 0.9975-3
23    
24            * R/diagMatrix.R (bdiag): new function constructing block diagonal
25            (sparse) matrices.
26            * man/bdiag.Rd: docu + examples
27    
28            * R/Csparse.R (replCmat): calling new Csparse_drop() now.
29    
30            * src/Csparse.c (Csparse_general_to_symmetric, Csparse_drop): new functions
31            * R/lsCMatrix.R: three more coercions to lsC (thanks to the above)
32    
33            * R/diagMatrix.R (Diagonal): '[<-' method for diag.matrices such
34            that result is sparse or diagonal (and not dense).
35    
36            * man/Subassign-methods.Rd: fix examples
37    
38            * R/Matrix.R (Matrix):  Matrix(0, *) or Matrix(*, sparse=TRUE)
39            should always return a sparse (and not sometimes a diagonal) matrix.
40    
41    2006-10-05  Martin Maechler  <maechler@stat.math.ethz.ch>
42    
43            * R/Matrix.R ([<-): also for value "Matrix" or "matrix"
44    
45    2006-10-04  Douglas Bates  <bates@stat.wisc.edu>
46    
47            * DESCRIPTION (Version): 0.9975-2
48    
49            * inst/include/Matrix_stubs.c (M_cholmod_sparse_to_triplet): export more symbols
50    
51    2006-10-02  Douglas Bates  <bates@R-project.org>
52    
53            * tests/dg_Matrix.R: Simplify test taking into account new code.
54    
55    2006-09-29  Martin Maechler  <maechler@stat.math.ethz.ch>
56    
57            * R/Csparse.R (replCmat): improve for missing i / j in non-simple cases
58    
59            * R/lsTMatrix.R: new files w/ missing methods
60            * R/nsTMatrix.R:  "  'for completeness'
61    
62            * tests/Class+Meth.R: a bit less 'not.ok.classes'
63    
64            * R/Tsparse.R (t): generalized "t" method from "dgT*" to "Tsparse*"
65    
66    
67    2006-09-28  Douglas Bates  <bates@R-project.org>
68    
69            * src/dppMatrix.h: Ensure definition of dspMatrix_validate is
70            included.
71    
72            * src/init.c, inst/include/{Matrix.h,Matrix_stubs.h,cholmod.h}:
73            Export C-callable functions used in Zt_create in lme4.
74    
75    2006-09-28  Martin Maechler  <maechler@stat.math.ethz.ch>
76    
77            * DESCRIPTION (Version): 0.9975-1
78    
79            * tests/simple.R: less checks fail; using NA, found that our
80                    kronecker() is not base-compatible with NA's.
81    
82            * R/dMatrix.R: "Compare" method now implemented for all cases
83    
84            * R/Auxiliaries.R (indTri): == which([lower/upper].tri( * )) new utility
85    
86            * man/dtpMatrix-class.Rd: mention length of 'x' slot
87    
88            * src/dtpMatrix.c (dtpMatrix_validate): fix check
89            * src/dspMatrix.c (dspMatrix_validate): ditto
90    
91            * R/dtTMatrix.R (gt2tT): fix ("l" -> "n")
92              including coercion to [nl]tTMatrix.
93    
94            * R/diagMatrix.R (show): print a header line as for other classes.
95    
96    2006-09-27  Martin Maechler  <maechler@stat.math.ethz.ch>
97    
98            * src/Makefile.win (SUBDIRS): fix typo
99    
100    2006-09-19  Martin Maechler  <maechler@stat.math.ethz.ch>
101    
102            * DESCRIPTION (Date): ready to release 0.9975-0 to CRAN
103    
104  2006-09-18  Douglas Bates  <bates@stat.wisc.edu>  2006-09-18  Douglas Bates  <bates@stat.wisc.edu>
105    
106          * R/[CT]sparse.R (crossprod and tcrossprod): Handle the cases for x          * R/[CT]sparse.R (crossprod and tcrossprod): Handle the cases for x
# Line 54  Line 157 
157          * tests/: adaptions          * tests/: adaptions
158          * src/chm_common.c (chm_dense_to_SEXP): and others:          * src/chm_common.c (chm_dense_to_SEXP): and others:
159                  new 'Rkind' argument: "l*" and "d*" both use CHOLMOD_REAL                  new 'Rkind' argument: "l*" and "d*" both use CHOLMOD_REAL
160          * src/Csparse.c, etc: dito          * src/Csparse.c, etc: ditto
161    
162  2006-09-11  Douglas Bates  <bates@R-project.org>  2006-09-11  Douglas Bates  <bates@R-project.org>
163    
# Line 73  Line 176 
176          * R/sparseMatrix.R (Tsp2grNEL): do not yet use graph::foo()          * R/sparseMatrix.R (Tsp2grNEL): do not yet use graph::foo()
177    
178          * R/dgeMatrix.R: do not define tcrossprod() methods for "matrix"          * R/dgeMatrix.R: do not define tcrossprod() methods for "matrix"
179          * man/tcrossprod.Rd: dito          * man/tcrossprod.Rd: ditto
180    
181  2006-09-08  Douglas Bates  <bates@stat.wisc.edu>  2006-09-08  Douglas Bates  <bates@stat.wisc.edu>
182    
# Line 116  Line 219 
219    
220          * R/sparseMatrix.R (Arith): moved Arith group method one-level up          * R/sparseMatrix.R (Arith): moved Arith group method one-level up
221          from "dsparse" to "sparse" and now go via "Csparse" instead of "dgC"          from "dsparse" to "sparse" and now go via "Csparse" instead of "dgC"
222          * R/dsparseMatrix.R: dito          * R/dsparseMatrix.R: ditto
223          * R/Csparse.R: dito          * R/Csparse.R: ditto
224    
225  2006-08-31  Martin Maechler  <maechler@stat.math.ethz.ch>  2006-08-31  Martin Maechler  <maechler@stat.math.ethz.ch>
226    
# Line 133  Line 236 
236    
237          * R/Auxiliaries.R (all0, is0): for 0-testing in presence of NA's          * R/Auxiliaries.R (all0, is0): for 0-testing in presence of NA's
238          * R/Auxiliaries.R (isTriMat): use all0() for 0-testing.          * R/Auxiliaries.R (isTriMat): use all0() for 0-testing.
239          (.is.diagonal): dito          (.is.diagonal): ditto
240    
241          * R/lgTMatrix.R: as("matrix", "lgTMatrix"): warn about NA's          * R/lgTMatrix.R: as("matrix", "lgTMatrix"): warn about NA's
242    

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