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Diff of /pkg/ChangeLog

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revision 1352, Mon Aug 7 18:31:12 2006 UTC revision 1405, Mon Aug 21 14:43:00 2006 UTC
# Line 1  Line 1 
1    2006-08-21  Douglas Bates  <bates@R-project.org>
2    
3            * src/lmer.c (internal_mer_RZXinv): Fix memory leak caught by
4            valgrind.
5    
6    2006-08-20  Douglas Bates  <bates@R-project.org>
7    
8            * src/sparseQR.c: Fix thinko in sparseQR_resid_fitted.
9            * tests/sparseQR.R: Added
10            * man/sparseQR-class.Rd: Document methods for qr.* generics
11            * R/sparseQR.R: Return correct # of coefs; fix cut-and-paste errors
12    
13    2006-08-19  Douglas Bates  <bates@R-project.org>
14    
15            * NAMESPACE, R/sparseQR.R, src/init.c,sparseQR.[ch],SOURCES_C.mkf:
16            Added methods for sparseQR for qr.qy, qr.qty, qr.coef, qr.resid
17            and qr.fitted.
18            * src/Mutils.[ch]: Added dup_mMatrix_as_dgeMatrix utility
19            * src/dgCMatrix.c: Check for ordering before storing q in dgCMatrix_QR
20    
21    2006-08-18  Martin Maechler  <maechler@stat.math.ethz.ch>
22    
23            * R/AllGeneric.R: add "qr" and "chol" generics; via 'trick' since
24            the base version has no "..." argument.
25    
26            * R/sparseMatrix.R (prSpMatrix): fix the triangular unit diagonal case.
27    
28            * R/Matrix.R: define and
29            * NAMESPACE: export as.numeric() and as.logical() methods.
30                    Let's hope these do not badly slow down something...
31            Finally export the zapsmall() method.
32    
33    2006-08-17  Douglas Bates  <bates@R-project.org>
34    
35            * src/dgCMatrix.[ch] (dgCMatrix_matrix_solve), src/init.c,
36            R/dgCMatrix.R: solve methods for dgCMatrix and dense RHS.
37            * src/dtCMatrix.c :Remove code that is no longer used
38            * R/dtCMatrix.R: Use C code for diagU2N in CsparseMatrix classes
39    
40    2006-08-14  Douglas Bates  <bates@R-project.org>
41    
42            * src/Csparse.[ch],init.c (Csparse_to_logical): Added utilities
43            Csparse_to_logical and Csparse_symmetric_to_general.
44            * R/dgCMatrix.R,dsCMatrix.R,Csparse.R : Consolidate general
45            coercion methods between CsparseMatrix and TsparseMatrix.
46    
47    2006-08-14  Douglas Bates  <bates@R-project.org>
48    
49            * R/dtCMatrix.R,dgCMatrix.R,Csparse.R src/init.c,dgCMatrix.[ch],
50            Csparse.[ch],chm_common.c,dense.c : Use CHOLMOD code and methods
51            for CsparseMatrix, TsparseMatrix, denseMatrix or matrix when
52            possible.
53    
54    2006-08-12  Douglas Bates  <bates@R-project.org>
55    
56            * src/chm_common.[ch],Csparse.[ch],Tsparse.[ch],CHMfactor.c,dtTMatrix.c,
57              dgTMatrix.c,dgCMatrix.c,dsCMatrix.c,dtTMatrix.c, R/dsTMatrix.R,
58              Tsparse.R,Csparse.R,dgTMatrix.R,dsCMatrix.R,lsCMatrix.R:
59              generalize conversions between TsparseMatrix, CsparseMatrix,
60              denseMatrix and matrix.  Preserve triangularity property and
61              propagate Dimnames in the easy cases.
62    
63    2006-08-10  Douglas Bates  <bates@R-project.org>
64    
65            * src/lmer.c: adjust checks in glmer_init for S4SXP
66            * tests/validObj.R: check of all(eq) should be all(eq@x) - worked
67            before S4SXP but for the wrong reasons.
68    
69    2006-08-08  Douglas Bates  <bates@R-project.org>
70    
71            * src/Csparse.c (Csparse_crossprod): tcrossprod result has stype = -1.
72            Later modified to return the upper triangle only.
73            * R/dgTMatrix.R: Remove vestigial crossprod and tcrossprod methods.
74    
75  2006-08-07  Douglas Bates  <bates@R-project.org>  2006-08-07  Douglas Bates  <bates@R-project.org>
76    
77          * src/Csparse.c (Csparse_crossprod): Set stype on result to avoid          * src/Csparse.c (Csparse_crossprod): Set stype on result to avoid

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