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Diff of /pkg/ChangeLog

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revision 1368, Sat Aug 12 17:34:00 2006 UTC revision 1423, Tue Aug 22 22:51:56 2006 UTC
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1    2006-08-22  Douglas Bates  <bates@R-project.org>
2    
3            * src/Mutils.c (dup_mMatrix_as_dgeMatrix): updated for general
4            types of classed Matrices, matrices or numeric or logical vectors.
5            * src/init.c: register dup_mMatrix_as_dgeMatrix for coercions.
6            * src/chm_common.c,Mutils.h (as_cholmod_factor): Move check_class
7            to Mutils.h (as an inline) and change name to Matrix_check_class;
8            fixes in as_cholmod_factor and chm_factor_to_SEXP.
9            * src/dsCMatrix.[ch]: Use CHOLMOD for dsCMatrix_chol and
10            dsCMatrix_matrix_solve.  Comment out vestigial functions.
11            * src/Csparse.c: use diag_P and uplo_P macros.
12    
13    2006-08-21  Douglas Bates  <bates@R-project.org>
14    
15            * src/lmer.c (internal_mer_RZXinv): Fix memory leak caught by
16            valgrind.
17            * tests/matprod.R: Add tests to verify that 'solve' and '%*%' are
18            inverses.
19            * src/sparseQR.c (sparseQR_validate): add new validation test, fix
20            -Wall warnings.
21            * src/dppMatrix.c,dtrMatrix.c,dgCMatrix.c,dgeMatrix.c,dspMatrix.c:
22            Use dup_mMatrix_as_dgeMatrix.
23    
24    2006-08-20  Douglas Bates  <bates@R-project.org>
25    
26            * src/sparseQR.c: Fix thinko in sparseQR_resid_fitted.
27            * tests/sparseQR.R: Added
28            * man/sparseQR-class.Rd: Document methods for qr.* generics
29            * R/sparseQR.R: Return correct # of coefs; fix cut-and-paste errors
30    
31    2006-08-19  Douglas Bates  <bates@R-project.org>
32    
33            * NAMESPACE, R/sparseQR.R, src/init.c,sparseQR.[ch],SOURCES_C.mkf:
34            Added methods for sparseQR for qr.qy, qr.qty, qr.coef, qr.resid
35            and qr.fitted.
36            * src/Mutils.[ch]: Added dup_mMatrix_as_dgeMatrix utility
37            * src/dgCMatrix.c: Check for ordering before storing q in dgCMatrix_QR
38    
39    2006-08-18  Martin Maechler  <maechler@stat.math.ethz.ch>
40    
41            * R/AllGeneric.R: add "qr" and "chol" generics; via 'trick' since
42            the base version has no "..." argument.
43    
44            * R/sparseMatrix.R (prSpMatrix): fix the triangular unit diagonal case.
45    
46            * R/Matrix.R: define and
47            * NAMESPACE: export as.numeric() and as.logical() methods.
48                    Let's hope these do not badly slow down something...
49            Finally export the zapsmall() method.
50    
51    2006-08-17  Douglas Bates  <bates@R-project.org>
52    
53            * src/dgCMatrix.[ch] (dgCMatrix_matrix_solve), src/init.c,
54            R/dgCMatrix.R: solve methods for dgCMatrix and dense RHS.
55            * src/dtCMatrix.c :Remove code that is no longer used
56            * R/dtCMatrix.R: Use C code for diagU2N in CsparseMatrix classes
57    
58    2006-08-14  Douglas Bates  <bates@R-project.org>
59    
60            * src/Csparse.[ch],init.c (Csparse_to_logical): Added utilities
61            Csparse_to_logical and Csparse_symmetric_to_general.
62            * R/dgCMatrix.R,dsCMatrix.R,Csparse.R : Consolidate general
63            coercion methods between CsparseMatrix and TsparseMatrix.
64    
65    2006-08-14  Douglas Bates  <bates@R-project.org>
66    
67            * R/dtCMatrix.R,dgCMatrix.R,Csparse.R src/init.c,dgCMatrix.[ch],
68            Csparse.[ch],chm_common.c,dense.c : Use CHOLMOD code and methods
69            for CsparseMatrix, TsparseMatrix, denseMatrix or matrix when
70            possible.
71    
72  2006-08-12  Douglas Bates  <bates@R-project.org>  2006-08-12  Douglas Bates  <bates@R-project.org>
73    
74          * src/chm_common.[ch],Csparse.[ch],Tsparse.[ch],CHMfactor.c,dtTMatrix.c,          * src/chm_common.[ch],Csparse.[ch],Tsparse.[ch],CHMfactor.c,dtTMatrix.c,

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