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revision 1312, Thu Jul 6 15:29:56 2006 UTC revision 1329, Fri Jul 21 06:47:06 2006 UTC
# Line 1  Line 1 
1    2006-07-20  Martin Maechler  <maechler@stat.math.ethz.ch>
2    
3            * R/Matrix.R("["): disable ("Matrix", i = "logical", j = "missing"),
4                    since that wrongly triggers also for M[ logi , ]
5    
6            * R/denseMatrix.R: "[" methods now also work e.g. when indexing
7            a symmetric matrix that results in a non-symmetric one.
8            * R/Auxiliaries.R (as_geClass): new function used in "[" above.
9    
10            * R/dMatrix.R: make round(M) work as round(M, 0)
11    
12            * R/dgTMatrix.R (image): coordinate system and axis now use
13            1-based indices, not 0-based ones.
14    
15            * R/Tsparse.R (.ind.prep for "["): get rid of max(<empty>) warning.
16            * tests/indexing.R: test it.
17    
18            * NAMESPACE: export isSymmetric(); has been a generic in "base" for a while;
19            * man/isSymmetric-methods.Rd: and document it.
20    
21            * R/SparseM-conv.R: added coercion methods for some 'SparseM' matrices.
22            * man/SparseM-conv.Rd: docu them
23    
24            * tests/other-pkgs.R: renamed from tests/graph.R and add example
25                    for 'SparseM' conversions
26    
27    2006-07-17  Douglas Bates  <Douglas.Bates@R-project.org>
28    
29            * R/Matrix.R (head): added head() and tail() methods.
30    
31    2006-07-17  Martin Maechler  <maechler@stat.math.ethz.ch>
32    
33            * DESCRIPTION (Version): 0.995-12 released to CRAN
34    
35    2006-07-15  Martin Maechler  <maechler@stat.math.ethz.ch>
36    
37            * tests/simple.R: add check for correct dsT -> dgT coercion;
38                    add check for correct printing of symmetric sparse matrices.
39    
40            * R/Auxiliaries.R (non0ind): return *all* non-0 entry indices also
41            for sparse symmetric matrices.
42    
43            * src/dsTMatrix.c (dsTMatrix_as_dgTMatrix): do not copy the
44            diagonal twice.
45    
46    2006-07-11  Douglas Bates  <Douglas.Bates@R-project.org>
47    
48            * src/dsTMatrix.c (dsTMatrix_as_dgTMatrix): Fix a case of INTEGER
49            being applied to the x slot (detected by Brian Ripley).
50    
51    2006-07-10  Martin Maechler  <maechler@stat.math.ethz.ch>
52    
53            * src/dgCMatrix.c (dgCMatrix_validate): 'p' slot must have correct length.
54    
55            * R/Auxiliaries.R (isTriC): fix buglet (we were 1-based!)
56    
57    2006-07-08  Martin Maechler  <maechler@stat.math.ethz.ch>
58    
59            * src/lgCMatrix.c (lgCMatrix_diag): new function
60            * R/lgCMatrix.R (diag): for new method
61    
62            * R/AllClass.R (TsparseMatrix): do use Tsparse_validate
63                 ==> construction of illegal "*gTMatrix" via new() should
64                 now be much less easy:
65            * tests/Class+Meth.R: assertError() for some illegal "dgT*"
66    
67            * R/Matrix.R (Matrix): Matrix(0, nrow,ncol) now "goes sparse"
68                    directly.
69            * man/Matrix.Rd: documents it.
70    
71  2006-07-06  Douglas Bates  <bates@R-project.org>  2006-07-06  Douglas Bates  <bates@R-project.org>
72    
73          * src/pedigree.c (pedigree_inbreeding): Correction in          * src/pedigree.c (pedigree_inbreeding): Correction in
# Line 9  Line 79 
79          objects.  Modified validity check on pedigree objects to account          objects.  Modified validity check on pedigree objects to account
80          for nonparallel patterns of missingness of parents.          for nonparallel patterns of missingness of parents.
81    
82            * man/{lmer-class.Rd,mcmcsamp.Rd}: Update documentation for glmer
83            class.
84    
85    2006-07-01  Martin Maechler  <maechler@stat.math.ethz.ch>
86    
87            * R/pMatrix.R: coercion pMatrix -> Tsparse
88    
89  2006-06-12  Douglas Bates  <bates@R-project.org>  2006-06-12  Douglas Bates  <bates@R-project.org>
90    
91            * DESCRIPTION (Version): 0.995-11 released to CRAN
92    
93          * R/lmer.R (mcmcsamp method): Corrected arrangments of names on          * R/lmer.R (mcmcsamp method): Corrected arrangments of names on
94          the output from mcmcsamp.          the output from mcmcsamp.
95    
# Line 23  Line 102 
102    
103          * R/diagMatrix.R (setAs): define coercion methods to sparse matrix          * R/diagMatrix.R (setAs): define coercion methods to sparse matrix
104          classes.          classes.
105            * R/sparseMatrix.R etc: multiplication of diagonal and sparse
106    
107  2006-06-08  Martin Maechler  <maechler@stat.math.ethz.ch>  2006-06-08  Martin Maechler  <maechler@stat.math.ethz.ch>
108    

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