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Diff of /pkg/ChangeLog

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revision 1283, Sat May 27 19:51:01 2006 UTC revision 1312, Thu Jul 6 15:29:56 2006 UTC
# Line 1  Line 1 
1    2006-07-06  Douglas Bates  <bates@R-project.org>
2    
3            * src/pedigree.c (pedigree_inbreeding): Correction in
4            initialization.  This function is not currently being used and is
5            not fully tested.
6    
7            * NAMESPACE, R/{AllClass.R,lmer.R}, src/{init.c,lmer.c}:
8            Introduced the glmer class.  Added code for mcmcmsamp on glmer
9            objects.  Modified validity check on pedigree objects to account
10            for nonparallel patterns of missingness of parents.
11    
12    2006-06-12  Douglas Bates  <bates@R-project.org>
13    
14            * R/lmer.R (mcmcsamp method): Corrected arrangments of names on
15            the output from mcmcsamp.
16    
17    2006-06-10  Douglas Bates  <bates@R-project.org>
18    
19            * R/lmer.R (simulestimate): added C code for calculating the trace
20            of the hat matrix.
21    
22    2006-06-09  Martin Maechler  <maechler@stat.math.ethz.ch>
23    
24            * R/diagMatrix.R (setAs): define coercion methods to sparse matrix
25            classes.
26    
27    2006-06-08  Martin Maechler  <maechler@stat.math.ethz.ch>
28    
29            * R/dgTMatrix.R (colSums): etc. All four of
30            colSums(), rowSums(), colMeans(), rowMeans() now should work for
31            all "Matrices".
32    
33    2006-06-01  Douglas Bates  <bates@stat.wisc.edu>
34    
35            * R/lmer.R (panel.ci): Add a reference line at zero and a
36            background grid to the qqmath plot of ranef.lmer.
37    
38    2006-05-30  Douglas Bates  <bates@stat.wisc.edu>
39    
40            * R/lmer.R (expandSlash): Functions (non-exported) to allow nested
41            grouping factors to be specified in the formula as (1|foo/bar).
42    
43    2006-05-27  Douglas Bates  <bates@stat.wisc.edu>
44    
45            * R/lmer.R (findbars and others): Change check of is.numeric to
46            !is.language to resolve the bug reported by Jacob Wegelin.
47    
48            * src/pedigree.c (pedigree_inbreeding): Initial implementation of
49            code to evaluate inbreeding coefficients without calculating T,
50            based on code in Sargolzaei and Iwaisaki's paper.
51    
52  2006-05-27  Douglas Bates  <bates@stat.wisc.edu>  2006-05-27  Douglas Bates  <bates@stat.wisc.edu>
53    
54          * R/{lmer.R,AllGeneric.R}, src/{init.c,lmer.[ch]}: Added local          * R/{lmer.R,AllGeneric.R}, src/{init.c,lmer.[ch]}: Added local

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