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revision 1213, Tue Feb 7 23:44:07 2006 UTC revision 1245, Wed Apr 12 20:31:18 2006 UTC
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1    2006-04-12  Martin Maechler  <maechler@stat.math.ethz.ch>
2    
3            * R/dgCMatrix.R: add  storage.mode(.) <- "double" for "matrix"
4            arguments, such that M %*% 1:6 now works
5            * Tests/matprod.R: test the above
6    
7    2006-04-03  Douglas Bates  <bates@stat.wisc.edu>
8    
9            * R/lmer.R (qqmath,ranef.lmer-method): added a qqmath method for
10            the ranef.lmer class.
11    
12            * R/AllClass.R, NAMESPACE, R/lmer.R: Added a postVar generic and
13            methods to extract the posterior variances from the bVar slot.
14    
15    2006-03-30  Martin Maechler  <maechler@stat.math.ethz.ch>
16    
17            * R/dtCMatrix.R: allow coercion from  dgC* to triangular (dtC*)
18            * R/dsCMatrix.R: and symmetric (dsC*) 'Csparse' matrices.
19    
20            * R/Tsparse.R: Tsparse* -> Csparse* coercion now works and is tested in
21            * tests/simple: (extended)
22    
23            * R/sparseMatrix.R (isTriangular): now using much improved
24            * R/Auxiliaries.R (isTriC): new triangularity check for *CMatrix
25    
26    2006-03-23  Douglas Bates  <bates@stat.wisc.edu>
27    
28            * src/dsyMatrix.c (dsyMatrix_as_dspMatrix): Propagate DimNames
29            (problem report from Franklin Parlamis).  This should be done
30            generally.
31    
32    2006-03-21  Douglas Bates  <bates@stat.wisc.edu>
33    
34            * R/AllClass.R,lmer.R: Change the name of the lmer.ranef class to
35            ranef.lmer (like summary.lmer).  Add the coef.lmer class and
36            update the plot methods.
37    
38    2006-03-20  Douglas Bates  <bates@stat.wisc.edu>
39    
40            * R/lmer.R (resid and ranef methods):  Added methods for the
41            "residuals" and "resid" generic but only for linear mixed model
42            fits.  Changed the ranef method to return a list of data frames so
43            that the plot methods now work.
44    
45    2006-03-16  Douglas Bates  <bates@bates2>
46    
47            * src/dpoMatrix.c (dpoMatrix_chol): Require n > 0 in call to
48            dpotrf - otherwise the BLAS on Mac OS X complains and quits.
49    
50            * DESCRIPTION (Date): New release
51    
52    2006-03-15  Martin Maechler  <maechler@stat.math.ethz.ch>
53    
54            * DESCRIPTION (Version): 0.995-6  -- to be released to CRAN
55    
56            * data/KNex.rda: replacing 'mm' and 'y' by KNex <- list(mm=mm, y=y)
57            * man/KNex.Rd: and other help files
58            * tests/*.R: several ones needed adaption
59            * inst/doc/Comparisons.Rnw: dito
60    
61    2006-03-11  Martin Maechler  <maechler@stat.math.ethz.ch>
62    
63            * R/dgCMatrix.R (replCmat): "[<-" methods for dgCMatrix
64    
65            * tests/indexing.R: tests for new [<- methods for sparse matrices.
66    
67    2006-03-10  Martin Maechler  <maechler@stat.math.ethz.ch>
68    
69            * R/dgTMatrix.R (replTmat): "[<-" methods for dgTMatrix
70    
71            * R/Tsparse.R (.ind.prep): fix out-of-range indexing
72    
73    2006-03-08  Martin Maechler  <maechler@stat.math.ethz.ch>
74    
75            * R/dMatrix.R: enable things like  M [ M < 10 ]
76            * R/dgeMatrix.R: implement it
77    
78    2006-03-06  Martin Maechler  <maechler@stat.math.ethz.ch>
79    
80            * R/AllClass.R: define "summary.mer" and "*.lmer"
81            * R/lmer.R (summary): summary(<mer>) computes & returns the above;
82            * R/lmer.R (show): now works with summary()
83    
84    2006-03-04  Martin Maechler  <maechler@stat.math.ethz.ch>
85    
86            * R/dgCMatrix.R: finally direct "Arith"  dgC o dgC
87            * R/Auxiliaries.R (WhichintersectInd): and other utilities to
88                    support the above
89    
90  2006-02-07  Douglas Bates  <bates@stat.wisc.edu>  2006-02-07  Douglas Bates  <bates@stat.wisc.edu>
91    
92          * R/lmer.R (lmer): fix initial values of offset and weights for glm.fit.          * R/lmer.R (lmer): fix initial values of offset and weights for glm.fit.

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