SCM

SCM Repository

[matrix] Diff of /pkg/ChangeLog
ViewVC logotype

Diff of /pkg/ChangeLog

Parent Directory Parent Directory | Revision Log Revision Log | View Patch Patch

revision 10, Mon Mar 22 20:20:05 2004 UTC revision 791, Sat Jul 2 20:57:32 2005 UTC
# Line 1  Line 1 
1    2005-06-08  Douglas Bates  <bates@bates1-home>
2    
3            * DESCRIPTION (Version): 0.96-1
4    
5            * moved  lmer-class' R and C code moved from lme4 to here
6    
7    2005-06-04  Douglas Bates  <bates@bates1-home>
8    
9            * R/dgCMatrix.R: Call to csc_matrix_mm used undefined arguments
10            (reported by Guissepe Ragusa <gragusa@ucsd.edu>)
11    
12    2005-06-02  Douglas Bates  <bates@bates1-home>
13    
14            * src/Makefile.win: Forgot to update this when Makefile changed.
15    
16    2005-05-11  Douglas Bates  <bates@bates1-home>
17    
18            * src/dgCMatrix.c (csc_transpose): Simplified function fixing a
19            bug reported by Kurt Hornik and Michael Hahsler.
20    
21    2005-05-10  Douglas Bates  <bates@bates1-home>
22    
23            * src/lgCMatrix.c (Matrix_lgClgCmm): Implementation of methods for
24            logical sparse matrices.  These will also be used in the symbolic
25            analysis for lmer objects.
26    
27            * src/dsCMatrix.c (dsCMatrix_matrix_solve): Copied the dimensions
28            of b to the result.  Fixes bug reported by Jean.Coursol@math.u-psud.fr
29    
30    2005-05-06  Douglas Bates  <bates@bates1-home>
31    
32            * src/dgeMatrix.c (dgeMatrix_colsums): Added an implementation of
33            colMeans, colSums, rowMeans and rowSums.
34    
35    2005-04-18  Douglas Bates  <bates@bates1-home>
36    
37            * src/lgCMatrix.[ch]: code for _validate method and stub for
38            multiplication operation.
39    
40            * src/dgeMatrix.c (dgeMatrix_matrix_solve): Passing wrong argument
41            to dgetrs.
42    
43            * src/init.c: Fix cut-and-paste error in definition of
44            dgeMatrix_matrix_solve
45    
46            * src/{many files}: Tighten code by using ALLOC_SLOT.
47    
48    2005-04-15  Douglas Bates  <bates@bates1-home>
49    
50            * R/AllClass.R: Add lgTMatrix and lgCMatrix classes
51    
52            * DESCRIPTION: Eliminate import of stats.
53    
54    
55    2005-04-06  Douglas Bates  <bates@bates1-home>
56    
57            * R/AllClass.R : add logical sparse matrix classes
58    
59    2005-04-01  Martin Maechler  <maechler@stat.math.ethz.ch>
60    
61            * R/dgTMatrix.R: add "[" method for triplet matrices
62            * R/sparseMatrix.R: and other sparse ones; --> add show() for sparse
63    
64    2005-03-31  Douglas Bates  <bates@bates1-home>
65    
66            * DESCRIPTION (Version): release 0.95-5 to CRAN
67    
68            * R/dMatrix.R: add %*%, crossprod and solve "fallback" methods
69            * R/sparseMatrix.R: %*%, crossprod()
70            * R/dgeMatrix.R: more "fallback" methods for numeric/dense matrices
71            * man/*.Rd: move method definitions to 'Matrix' and 'dMatrix'
72            * src/lmer.c (lmer_fitted): fix thinko
73    
74    2005-03-26  Martin Maechler  <maechler@stat.math.ethz.ch>
75    
76            * R/AllClass.R: add two virtual sparse classes ``on top''
77    
78    2005-03-24  Martin Maechler  <maechler@stat.math.ethz.ch>
79    
80            * R/AllClass.R (setClass): use "VIRTUAL" for the virtual classes;
81                    correspondingly fix examples and tests/ since new()
82                    doesn't work for virtual classes.
83    
84    2005-03-17  Martin Maechler  <maechler@stat.math.ethz.ch>
85    
86            * R/Matrix.R (as.matrix): method and one for unname()
87            * tests/dpoMatrix.R: tests should now be less platform dependent;
88              also run for R 2.1.0; using as.matrix()
89    
90    2005-03-15  Douglas Bates  <bates@bates1-home>
91    
92            * R/pMatrix.R: "pMatrix" class added
93            * ....
94    
95    2005-03-14  Douglas Bates  <bates@bates1-home>
96    
97            * R/dtpMatrix.R: Add unpack method and an example.
98    
99            * src/dsyMatrix.c (dsyMatrix_trf): Add BunchKaufman factorization
100            of general symmetric matrices and associated S4 methods.
101    
102    2005-03-10  Martin Maechler  <maechler@stat.math.ethz.ch>
103            +
104    2005-03-05  Martin Maechler  <maechler@stat.math.ethz.ch>
105    
106            * R/dgeMatrix.R (setAs): and many other files: more coercion,
107              crossprod() and "%*%" methods added; tests, too.
108            * tests/matprod.R: new, for testing these
109    
110    2005-03-03  Douglas Bates  <bates@bates1-home>
111    
112            * src/lmer.c (lmer_fitted): Added.
113    
114    2005-03-02  Douglas Bates  <bates@bates1-home>
115    
116            * R/dsTMatrix.R: Conversion from dsTMatrix to dsCMatrix
117    
118    2005-02-28  Douglas Bates  <bates@bates1-home>
119    
120            * src/*.c,po/,inst/po: Internationalization and localization of
121            the package.
122    
123            * src/ldl.[ch]: Removed these as their contents are referenced in the
124            R_ldl.c file.
125    
126            * src/flame.[ch]: Removed these source files.
127    
128            * src/dtrMatrix.c (make_array_triangular): Move to Mutils
129    
130            * src/LU.[ch],src/init.c: absorb in factorizations
131    
132            * src/Mutils.h: prepare for internationalization
133    
134            * src/cblas.h: move the enum definitions to Mutils.h and remove
135            this file
136    
137    2005-02-26  Martin Maechler  <maechler@stat.math.ethz.ch>
138    
139            * R/dgeMatrix.R: provide "dimnames" and "dimnames<-" methods
140    
141            * R/dtrMatrix.R: fix t() method
142    
143            * R/dgeMatrix.R: define group methods "Arith", "Math", "Math2"
144            * NAMESPACE: export them (and import generics from "methods")
145            * tests/group-methods.R : and test them.
146    
147            * src/dtrMatrix.c (dtrMatrix_as_dgeMatrix): prevent seg.fault in
148            border case
149    
150    2005-02-24  Douglas Bates  <bates@stat.wisc.edu>
151    
152            * DESCRIPTION (Version): 0.95-2  released to CRAN
153    
154            * src/dgBCMatrix.c:
155            * src/lmer.c: many changes
156            * ...
157    
158    2005-02-04  Martin Maechler  <maechler@stat.math.ethz.ch>
159    
160            * R/Matrix.R: add more sophisticated show() method.
161    
162    2005-02-02  Douglas Bates  <bates@stat.wisc.edu>
163    
164            * */* : almost complete reorganization of classes.
165    
166    2005-01-26  Douglas Bates  <bates@bates7>
167    
168            * R/AllGeneric.R: Added matrix exponential generic expm and a method
169            for the geMatrix class.
170    
171    2005-01-24  Douglas Bates  <bates@bates7>
172    
173            * src/Makefile (clean): Remove *.a and *.so
174    
175            * man/cscBlocked-class.Rd: Remove reference to the lmer-class.
176    
177    2005-01-23  Douglas Bates  <bates@bates7>
178    
179            * src/lmer.c (Lind): Definition of Lind was backwards.  This only
180            had an effect in cases with more than 2 grouping factors.
181    
182    2005-01-03  Douglas Bates  <bates@bates1-home>
183    
184            * src/lmeRep.c (lmer_variances): change from lmeRep to lmer
185    
186    2004-12-23  Douglas Bates  <bates@bates1-home>
187    
188            * src/init.c (R_init_Matrix): Reorder calls to R_registerRoutines
189            and R_useDynamicSymbols (suggested by B.D.Ripley).
190    
191    2004-12-14  Douglas Bates  <bates@bates1-home>
192    
193            * R/sscMatrix.R: Add determinant methods
194    
195            * src/triplet.[ch],src/init.c (triplet_to_matrix): Add a coercion
196            for tripletMatrix to matrix.
197    
198    2004-12-13  Douglas Bates  <bates@bates1-home>
199    
200            * R/AllClass.R (.onLoad): Eliminate the bbCrosstab class, which is
201            no longer used.
202    
203            * src/R_ldl.c: Created an R-specific version of the ldl.[ch] files
204            with dynamic allocation of scratch arrays.
205    
206            * src/ssclme.c (ssclme_copy_ctab): Fixed bug in creation of ZtZ
207            for multivariate random effects with multiple grouping factors.
208            Fixes part but not all of #15.
209    
210    2004-12-03  Douglas Bates  <bates@bates1-home>
211    
212            * src/lmeRep.c (lmeRep_factor): order of operations for multiple
213            scalar grouping factors corrected.
214    
215    2004-11-29  Douglas Bates  <bates@bates1-home>
216    
217            * src/bCrosstab.c: remove diag_update which is no longer used
218    
219    2004-11-16  Douglas Bates  <bates@bates1-home>
220    
221            * src/Metis_utils.c: Move metis.h include to C sources so that the
222            .h file can be included.
223    
224    2004-11-12  Douglas Bates  <bates@bates1-home>
225    
226            * src/LU.c,geMatrix.c,trMatrix.c, etc.:
227            Complete allocation of slots in NEW_OBJECT.
228    
229            * src/Mutils.h: Moved list of symbols to an include file
230    
231    2004-11-11  Douglas Bates  <bates@bates1-home>
232    
233            * src/geMutils.c (Matrix_init): remove unused function
234    
235    2004-11-10  Douglas Bates  <bates@bates1-home>
236    
237            * src/cscMatrix.c (csc_to_imagemat): removed unused function
238    
239    2004-11-05  Douglas Bates  <bates@bates1-home>
240    
241            * src/Makefile.win (SOURCES_C): Keep consistent with Makefile
242    
243    2004-10-27  Douglas Bates  <bates@bates1-home>
244    
245            * R/pdmatrix.R: remove PACKAGE="Matrix" in .Call calls
246    
247    2004-10-04  Douglas Bates  <bates@bates1-home>
248    
249            * src/init.c: Created R_init_Matrix and added registration of C
250            routines.
251    
252    2004-10-02  Douglas Bates  <bates@bates1-home>
253    
254            * R/tripletMatrix.R: Force a require(lattice) for the image methods.
255    
256    2004-06-15  Douglas Bates  <bates@bates7>
257    
258            * man/trMatrix-class.Rd: Escape the % chars in .Rd files.
259    
260    2004-04-20  Douglas Bates  <bates@stat.wisc.edu>
261    
262            * src/Makefile.win ($(SHLIB)): Modifications per Uwe Ligges.
263    
264    2004-04-19  Douglas Bates  <bates@stat.wisc.edu>
265    
266            * src/ssclme.c (ssclme_update_mm): fix logic error in
267            ssclme_update_mm
268    
269    2004-04-18  Douglas Bates  <bates@stat.wisc.edu>
270    
271            * src/ssclme.c (ssclme_coef, ssclme_coefGets): Create consistency
272            in the order of unconstrained and constrained parameters.
273            (ssclme_gradient): Added the gradients (not yet correct for
274            multidimensional, unconstrained case).
275    
276    2004-04-14  Douglas Bates  <bates@stat.wisc.edu>
277    
278            * src/ssclme.c (ssclme_EMsteps): Fix logic in REML update
279    
280            * src/Makefile.win: Remove unneeded ranlib call
281    
282    2004-04-12  Douglas Bates  <bates@stat.wisc.edu>
283    
284            * DESCRIPTION (Version): New release
285    
286            * src/Makefile.win: Update Makefile.win to umfpack removal.
287    
288    2004-04-05  Douglas Bates  <bates@bates2_home>
289    
290            * src/triplet_to_col.c: Create triplet_to_col as a native
291            function, not the version from umfpack.  There were problems with
292            the configuration of UMFPACK for 64-bit processors and there was
293            only one umfpack routine being used so I moved it here.
294    
295    2004-04-04  Douglas Bates  <bates@bates2_home>
296    
297            * src/ssclme.c (ssclme_variances): New function.
298    
299    2004-03-28  Douglas Bates  <bates@bates2_home>
300    
301            * src/ssclme.c (ssclme_fitted): Added function.
302    
303    2004-03-27  Douglas Bates  <bates@bates2_home>
304    
305            * src/ssclme.c (ssclme_transfer_dimnames): Add new function to
306            store the dimnames in the XtX and bVar slots
307            (ssclme_update_mm): Change the dimensions of the bVar slot
308            components and the returned value from ssclme_ranef.
309    
310  2004-03-18  Douglas Bates  <bates@stat.wisc.edu>  2004-03-18  Douglas Bates  <bates@stat.wisc.edu>
311    
312          * R/{pdMat.R,pdIdent.R,pdLogChol.R,pdMatrixLog.R,pdNatural.R},          * R/{pdMat.R,pdIdent.R,pdLogChol.R,pdMatrixLog.R,pdNatural.R},

Legend:
Removed from v.10  
changed lines
  Added in v.791

root@r-forge.r-project.org
ViewVC Help
Powered by ViewVC 1.0.0  
Thanks to:
Vienna University of Economics and Business Powered By FusionForge