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Diff of /pkg/ChangeLog

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revision 10, Mon Mar 22 20:20:05 2004 UTC revision 512, Fri Feb 4 23:45:12 2005 UTC
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1    2005-02-04  Martin Maechler  <maechler@stat.math.ethz.ch>
2    
3            * R/Matrix.R: add more sophisticated show() method.
4    
5    2005-01-26  Douglas Bates  <bates@bates7>
6    
7            * R/AllGeneric.R: Added matrix exponential generic expm and a method
8            for the geMatrix class.
9    
10    2005-01-24  Douglas Bates  <bates@bates7>
11    
12            * src/Makefile (clean): Remove *.a and *.so
13    
14            * man/cscBlocked-class.Rd: Remove reference to the lmer-class.
15    
16    2005-01-23  Douglas Bates  <bates@bates7>
17    
18            * src/lmer.c (Lind): Definition of Lind was backwards.  This only
19            had an effect in cases with more than 2 grouping factors.
20    
21    2005-01-03  Douglas Bates  <bates@bates1-home>
22    
23            * src/lmeRep.c (lmer_variances): change from lmeRep to lmer
24    
25    2004-12-23  Douglas Bates  <bates@bates1-home>
26    
27            * src/init.c (R_init_Matrix): Reorder calls to R_registerRoutines
28            and R_useDynamicSymbols (suggested by B.D.Ripley).
29    
30    2004-12-14  Douglas Bates  <bates@bates1-home>
31    
32            * R/sscMatrix.R: Add determinant methods
33    
34            * src/triplet.[ch],src/init.c (triplet_to_matrix): Add a coercion
35            for tripletMatrix to matrix.
36    
37    2004-12-13  Douglas Bates  <bates@bates1-home>
38    
39            * R/AllClass.R (.onLoad): Eliminate the bbCrosstab class, which is
40            no longer used.
41    
42            * src/R_ldl.c: Created an R-specific version of the ldl.[ch] files
43            with dynamic allocation of scratch arrays.
44    
45            * src/ssclme.c (ssclme_copy_ctab): Fixed bug in creation of ZtZ
46            for multivariate random effects with multiple grouping factors.
47            Fixes part but not all of #15.
48    
49    2004-12-03  Douglas Bates  <bates@bates1-home>
50    
51            * src/lmeRep.c (lmeRep_factor): order of operations for multiple
52            scalar grouping factors corrected.
53    
54    2004-11-29  Douglas Bates  <bates@bates1-home>
55    
56            * src/bCrosstab.c: remove diag_update which is no longer used
57    
58    2004-11-16  Douglas Bates  <bates@bates1-home>
59    
60            * src/Metis_utils.c: Move metis.h include to C sources so that the
61            .h file can be included.
62    
63    2004-11-12  Douglas Bates  <bates@bates1-home>
64    
65            * src/LU.c,geMatrix.c,trMatrix.c, etc.:
66            Complete allocation of slots in NEW_OBJECT.
67    
68            * src/Mutils.h: Moved list of symbols to an include file
69    
70    2004-11-11  Douglas Bates  <bates@bates1-home>
71    
72            * src/geMutils.c (Matrix_init): remove unused function
73    
74    2004-11-10  Douglas Bates  <bates@bates1-home>
75    
76            * src/cscMatrix.c (csc_to_imagemat): removed unused function
77    
78    2004-11-05  Douglas Bates  <bates@bates1-home>
79    
80            * src/Makefile.win (SOURCES_C): Keep consistent with Makefile
81    
82    2004-10-27  Douglas Bates  <bates@bates1-home>
83    
84            * R/pdmatrix.R: remove PACKAGE="Matrix" in .Call calls
85    
86    2004-10-04  Douglas Bates  <bates@bates1-home>
87    
88            * src/init.c: Created R_init_Matrix and added registration of C
89            routines.
90    
91    2004-10-02  Douglas Bates  <bates@bates1-home>
92    
93            * R/tripletMatrix.R: Force a require(lattice) for the image methods.
94    
95    2004-06-15  Douglas Bates  <bates@bates7>
96    
97            * man/trMatrix-class.Rd: Escape the % chars in .Rd files.
98    
99    2004-04-20  Douglas Bates  <bates@stat.wisc.edu>
100    
101            * src/Makefile.win ($(SHLIB)): Modifications per Uwe Ligges.
102    
103    2004-04-19  Douglas Bates  <bates@stat.wisc.edu>
104    
105            * src/ssclme.c (ssclme_update_mm): fix logic error in
106            ssclme_update_mm
107    
108    2004-04-18  Douglas Bates  <bates@stat.wisc.edu>
109    
110            * src/ssclme.c (ssclme_coef, ssclme_coefGets): Create consistency
111            in the order of unconstrained and constrained parameters.
112            (ssclme_gradient): Added the gradients (not yet correct for
113            multidimensional, unconstrained case).
114    
115    2004-04-14  Douglas Bates  <bates@stat.wisc.edu>
116    
117            * src/ssclme.c (ssclme_EMsteps): Fix logic in REML update
118    
119            * src/Makefile.win: Remove unneeded ranlib call
120    
121    2004-04-12  Douglas Bates  <bates@stat.wisc.edu>
122    
123            * DESCRIPTION (Version): New release
124    
125            * src/Makefile.win: Update Makefile.win to umfpack removal.
126    
127    2004-04-05  Douglas Bates  <bates@bates2_home>
128    
129            * src/triplet_to_col.c: Create triplet_to_col as a native
130            function, not the version from umfpack.  There were problems with
131            the configuration of UMFPACK for 64-bit processors and there was
132            only one umfpack routine being used so I moved it here.
133    
134    2004-04-04  Douglas Bates  <bates@bates2_home>
135    
136            * src/ssclme.c (ssclme_variances): New function.
137    
138    2004-03-28  Douglas Bates  <bates@bates2_home>
139    
140            * src/ssclme.c (ssclme_fitted): Added function.
141    
142    2004-03-27  Douglas Bates  <bates@bates2_home>
143    
144            * src/ssclme.c (ssclme_transfer_dimnames): Add new function to
145            store the dimnames in the XtX and bVar slots
146            (ssclme_update_mm): Change the dimensions of the bVar slot
147            components and the returned value from ssclme_ranef.
148    
149  2004-03-18  Douglas Bates  <bates@stat.wisc.edu>  2004-03-18  Douglas Bates  <bates@stat.wisc.edu>
150    
151          * R/{pdMat.R,pdIdent.R,pdLogChol.R,pdMatrixLog.R,pdNatural.R},          * R/{pdMat.R,pdIdent.R,pdLogChol.R,pdMatrixLog.R,pdNatural.R},

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