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Annotation of /pkg/ChangeLog

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Revision 876 - (view) (download)

1 : bates 876 2005-08-29 Douglas Bates <bates@wisc.edu>
2 :    
3 :     * src/dgTMatrix.c (graphNEL_as_dgTMatrix): Corrected the position
4 :     indicator pos not being updated. Also enforced upper triangular
5 :     for symmetric case. Need to coerce edges component of elements of
6 :     edge list - grr! (Why don't they define their classes cleanly?)
7 :    
8 : maechler 871 2005-08-26 Martin Maechler <maechler@stat.math.ethz.ch>
9 :    
10 :     * R/Matrix.R: added first "[<-" methods; not yet functional
11 :     * R/denseMatrix.R: dito
12 :     * man/Subassign-methods.Rd: new help file for these
13 :    
14 :     2005-08-25 Martin Maechler <maechler@stat.math.ethz.ch>
15 :    
16 :     * DESCRIPTION (Version): 0.98-6
17 :    
18 :     * R/denseMatrix.R: new file for "[" fallback methods for all dense
19 :     matrices.
20 :    
21 : maechler 868 2005-08-19 Martin Maechler <maechler@stat.math.ethz.ch>
22 :    
23 :     * src/lgCMatrix.c (lcsc_to_matrix): new; need for
24 :     as( <logical>, "matrix")
25 :    
26 :     * R/pMatrix.R: coercion to "lgTMatrix"
27 :    
28 :     * R/gTMatrix.R: new virtual class to define "[" methods for.
29 :     * man/gTMatrix-class.Rd:
30 :     * General slight re-organization of where "[" methods are defined.
31 :     more to come.
32 :    
33 : maechler 871 2005-08-18 Douglas Bates <bates@wisc.edu>
34 : maechler 868
35 : maechler 871 * DESCRIPTION (Version): 0.98-5 released to CRAN
36 :    
37 :     * src/dgTMatrix.c (graphNEL_as_dgTMatrix): add first graphNEL methods
38 :     * .....
39 :    
40 : bates 863 2005-08-18 Douglas Bates <bates@localhost.localdomain>
41 :    
42 :     * R/lmer.R: Corrected naming scheme in mcmcsamp to work with lmer
43 :     or glmer objects.
44 :    
45 : maechler 860 2005-08-17 Martin Maechler <maechler@stat.math.ethz.ch>
46 :    
47 :     * DESCRIPTION (Version): 0.98-4 : upload to CRAN
48 :    
49 :     2005-08-16 Douglas Bates <bates@localhost.localdomain>
50 :    
51 :     * R/HBMM.R: finish re-writing R-only code.
52 :    
53 : bates 854 2005-08-15 Douglas Bates <bates@localhost.localdomain>
54 :    
55 :     * man/externalFormats.Rd: move documentation for writeHB and
56 :     writeMM here.
57 :    
58 :     * src/mmio.c: replace inclusion of <malloc.h> by <stdlib.h>
59 :     (suggested by Paul Roecker).
60 :    
61 :     * tests/validObj.R (assertError): Comment out test that is failing
62 :     after recent changes in r-devel.
63 :    
64 : maechler 860
65 : maechler 848 2005-08-11 Martin Maechler <maechler@stat.math.ethz.ch>
66 :    
67 :     * R/AllClass.R: intermediate virtual class "denseMatrix"
68 :     * man/denseMatrix-class.Rd
69 :     * NAMESPACE: export it, and also export
70 :     * man/unused-classes.Rd: "iMatrix", "zMatrix" and "ldenseMatrix"
71 :    
72 : bates 846 2005-08-10 Douglas Bates <bates@wisc.edu>
73 :    
74 : maechler 848 * DESCRIPTION (Version): 0.98-3 to CRAN
75 :    
76 : bates 846 * src/dtrMatrix.c (dtrMatrix_validate): fixed up validation and
77 :     matrix_solve code (which was really, really wrong).
78 :    
79 : bates 835 2005-08-07 Douglas Bates <bates@wisc.edu>
80 : maechler 834
81 :     * DESCRIPTION (Version): 0.98-2
82 :    
83 :     * R/HBMM.R (readHB), (readMM): read Matrix Market formats
84 :    
85 :     * R/lmer.R (abbrvNms): new
86 :     * R/lmer.R (mcmcsamp): allow transformed parameters
87 : bates 835 * src/HBMM.c (Matrix_writeMatrixMarket): Added read/write routines
88 :     for the Harwell-Boeing and the MatrixMarket formats.
89 : maechler 834
90 :     2005-08-04 Martin Maechler <maechler@stat.math.ethz.ch>
91 :    
92 :     * man/dtrMatrix-class.Rd: add examples
93 : bates 835 * man/dtpMatrix-class.Rd: ditto; plus note about PROBLEM
94 : maechler 834
95 :     * TODO: note the dtpMatrix (docu) bug
96 :    
97 :     * R/zzz.R (.onLoad): assignInNamespace("as.matrix", *, "base")
98 :     in order to ensure that new as.matrix() is used by old functions,
99 :     e.g., svd(), qr(), eigen(), dist(),..;
100 :     apply(), also matplot() or pairs().
101 :    
102 :    
103 :     2005-08-03 Martin Maechler <maechler@stat.math.ethz.ch>
104 :    
105 :     * R/lmer.R: add 'fixme' comments and move the linear vs glm check;
106 :     add comments about 'control' / lmerControl() arguments
107 :    
108 : bates 835 2005-07-27 Douglas Bates <bates@wisc.edu>
109 : bates 820
110 : bates 835 * man/sleepstudy.Rd: Added the sleep data set.
111 : maechler 834 * DESCRIPTION (Version): 0.98-1 released to CRAN
112 : bates 820
113 : bates 835 2005-07-12 Douglas Bates <bates@wisc.edu>
114 : maechler 834 * man/sleepstudy.Rd: Added the sleep data set.
115 :    
116 : bates 809 * R/lmer.R (glmmMCMC): Added PACKAGE = "Matrix" in a couple of
117 :     .Call calls that were producing spurious output.
118 :    
119 : bates 835 2005-07-05 Douglas Bates <bates@wisc.edu>
120 : bates 801
121 :     * R/lmer.R (lmer): stored updated variance component estimates in
122 :     mer object for the generalized model. (Bug reported by Renaud
123 :     Lancelot).
124 :    
125 : bates 835 2005-07-03 Douglas Bates <bates@wisc.edu>
126 : bates 794
127 :     * src/lmer.c (glmer_devAGQ): Added AGQ for single grouping factor,
128 :     unidimensional case.
129 :    
130 : bates 835 2005-06-08 Douglas Bates <bates@wisc.edu>
131 : maechler 791
132 :     * DESCRIPTION (Version): 0.96-1
133 :    
134 :     * moved lmer-class' R and C code moved from lme4 to here
135 :    
136 : bates 835 2005-06-04 Douglas Bates <bates@wisc.edu>
137 : bates 763
138 :     * R/dgCMatrix.R: Call to csc_matrix_mm used undefined arguments
139 :     (reported by Guissepe Ragusa <gragusa@ucsd.edu>)
140 :    
141 : bates 835 2005-06-02 Douglas Bates <bates@wisc.edu>
142 : bates 763
143 :     * src/Makefile.win: Forgot to update this when Makefile changed.
144 :    
145 : bates 835 2005-05-11 Douglas Bates <bates@wisc.edu>
146 : bates 726
147 :     * src/dgCMatrix.c (csc_transpose): Simplified function fixing a
148 :     bug reported by Kurt Hornik and Michael Hahsler.
149 :    
150 : bates 835 2005-05-10 Douglas Bates <bates@wisc.edu>
151 : bates 725
152 :     * src/lgCMatrix.c (Matrix_lgClgCmm): Implementation of methods for
153 :     logical sparse matrices. These will also be used in the symbolic
154 :     analysis for lmer objects.
155 :    
156 :     * src/dsCMatrix.c (dsCMatrix_matrix_solve): Copied the dimensions
157 :     of b to the result. Fixes bug reported by Jean.Coursol@math.u-psud.fr
158 : maechler 791
159 : bates 835 2005-05-06 Douglas Bates <bates@wisc.edu>
160 : bates 714
161 :     * src/dgeMatrix.c (dgeMatrix_colsums): Added an implementation of
162 :     colMeans, colSums, rowMeans and rowSums.
163 :    
164 : bates 835 2005-04-18 Douglas Bates <bates@wisc.edu>
165 : bates 692
166 :     * src/lgCMatrix.[ch]: code for _validate method and stub for
167 :     multiplication operation.
168 :    
169 :     * src/dgeMatrix.c (dgeMatrix_matrix_solve): Passing wrong argument
170 :     to dgetrs.
171 :    
172 :     * src/init.c: Fix cut-and-paste error in definition of
173 :     dgeMatrix_matrix_solve
174 :    
175 :     * src/{many files}: Tighten code by using ALLOC_SLOT.
176 :    
177 : bates 835 2005-04-15 Douglas Bates <bates@wisc.edu>
178 : bates 692
179 :     * R/AllClass.R: Add lgTMatrix and lgCMatrix classes
180 :    
181 :     * DESCRIPTION: Eliminate import of stats.
182 :    
183 : maechler 791
184 : bates 835 2005-04-06 Douglas Bates <bates@wisc.edu>
185 : bates 692
186 :     * R/AllClass.R : add logical sparse matrix classes
187 :    
188 : maechler 687 2005-04-01 Martin Maechler <maechler@stat.math.ethz.ch>
189 :    
190 :     * R/dgTMatrix.R: add "[" method for triplet matrices
191 :     * R/sparseMatrix.R: and other sparse ones; --> add show() for sparse
192 :    
193 : bates 835 2005-03-31 Douglas Bates <bates@wisc.edu>
194 : maechler 687
195 :     * DESCRIPTION (Version): release 0.95-5 to CRAN
196 :    
197 :     * R/dMatrix.R: add %*%, crossprod and solve "fallback" methods
198 :     * R/sparseMatrix.R: %*%, crossprod()
199 :     * R/dgeMatrix.R: more "fallback" methods for numeric/dense matrices
200 :     * man/*.Rd: move method definitions to 'Matrix' and 'dMatrix'
201 :     * src/lmer.c (lmer_fitted): fix thinko
202 :    
203 : maechler 676 2005-03-26 Martin Maechler <maechler@stat.math.ethz.ch>
204 :    
205 :     * R/AllClass.R: add two virtual sparse classes ``on top''
206 :    
207 :     2005-03-24 Martin Maechler <maechler@stat.math.ethz.ch>
208 :    
209 :     * R/AllClass.R (setClass): use "VIRTUAL" for the virtual classes;
210 :     correspondingly fix examples and tests/ since new()
211 :     doesn't work for virtual classes.
212 :    
213 : maechler 658 2005-03-17 Martin Maechler <maechler@stat.math.ethz.ch>
214 :    
215 :     * R/Matrix.R (as.matrix): method and one for unname()
216 :     * tests/dpoMatrix.R: tests should now be less platform dependent;
217 :     also run for R 2.1.0; using as.matrix()
218 :    
219 : bates 835 2005-03-15 Douglas Bates <bates@wisc.edu>
220 : maechler 658
221 :     * R/pMatrix.R: "pMatrix" class added
222 :     * ....
223 :    
224 : bates 835 2005-03-14 Douglas Bates <bates@wisc.edu>
225 : bates 645
226 :     * R/dtpMatrix.R: Add unpack method and an example.
227 :    
228 :     * src/dsyMatrix.c (dsyMatrix_trf): Add BunchKaufman factorization
229 :     of general symmetric matrices and associated S4 methods.
230 :    
231 : maechler 658 2005-03-10 Martin Maechler <maechler@stat.math.ethz.ch>
232 :     +
233 :     2005-03-05 Martin Maechler <maechler@stat.math.ethz.ch>
234 :    
235 :     * R/dgeMatrix.R (setAs): and many other files: more coercion,
236 :     crossprod() and "%*%" methods added; tests, too.
237 :     * tests/matprod.R: new, for testing these
238 :    
239 : bates 835 2005-03-03 Douglas Bates <bates@wisc.edu>
240 : bates 599
241 :     * src/lmer.c (lmer_fitted): Added.
242 :    
243 : bates 835 2005-03-02 Douglas Bates <bates@wisc.edu>
244 : bates 596
245 :     * R/dsTMatrix.R: Conversion from dsTMatrix to dsCMatrix
246 :    
247 : bates 835 2005-02-28 Douglas Bates <bates@wisc.edu>
248 : bates 582
249 :     * src/*.c,po/,inst/po: Internationalization and localization of
250 :     the package.
251 :    
252 :     * src/ldl.[ch]: Removed these as their contents are referenced in the
253 :     R_ldl.c file.
254 :    
255 :     * src/flame.[ch]: Removed these source files.
256 : maechler 658
257 : bates 582 * src/dtrMatrix.c (make_array_triangular): Move to Mutils
258 :    
259 :     * src/LU.[ch],src/init.c: absorb in factorizations
260 :    
261 :     * src/Mutils.h: prepare for internationalization
262 :    
263 :     * src/cblas.h: move the enum definitions to Mutils.h and remove
264 :     this file
265 :    
266 : maechler 578 2005-02-26 Martin Maechler <maechler@stat.math.ethz.ch>
267 :    
268 : maechler 579 * R/dgeMatrix.R: provide "dimnames" and "dimnames<-" methods
269 :    
270 :     * R/dtrMatrix.R: fix t() method
271 :    
272 : maechler 578 * R/dgeMatrix.R: define group methods "Arith", "Math", "Math2"
273 : maechler 658 * NAMESPACE: export them (and import generics from "methods")
274 : maechler 578 * tests/group-methods.R : and test them.
275 :    
276 :     * src/dtrMatrix.c (dtrMatrix_as_dgeMatrix): prevent seg.fault in
277 :     border case
278 :    
279 :     2005-02-24 Douglas Bates <bates@stat.wisc.edu>
280 :    
281 : maechler 658 * DESCRIPTION (Version): 0.95-2 released to CRAN
282 : maechler 578
283 :     * src/dgBCMatrix.c:
284 :     * src/lmer.c: many changes
285 :     * ...
286 :    
287 : maechler 512 2005-02-04 Martin Maechler <maechler@stat.math.ethz.ch>
288 :    
289 :     * R/Matrix.R: add more sophisticated show() method.
290 :    
291 : maechler 578 2005-02-02 Douglas Bates <bates@stat.wisc.edu>
292 :    
293 :     * */* : almost complete reorganization of classes.
294 :    
295 : bates 835 2005-01-26 Douglas Bates <bates@wisc.edu>
296 : bates 460
297 :     * R/AllGeneric.R: Added matrix exponential generic expm and a method
298 :     for the geMatrix class.
299 :    
300 : bates 835 2005-01-24 Douglas Bates <bates@wisc.edu>
301 : bates 460
302 :     * src/Makefile (clean): Remove *.a and *.so
303 :    
304 :     * man/cscBlocked-class.Rd: Remove reference to the lmer-class.
305 :    
306 : bates 835 2005-01-23 Douglas Bates <bates@wisc.edu>
307 : bates 460
308 : maechler 658 * src/lmer.c (Lind): Definition of Lind was backwards. This only
309 : bates 460 had an effect in cases with more than 2 grouping factors.
310 :    
311 : bates 835 2005-01-03 Douglas Bates <bates@wisc.edu>
312 : bates 415
313 :     * src/lmeRep.c (lmer_variances): change from lmeRep to lmer
314 :    
315 : bates 835 2004-12-23 Douglas Bates <bates@wisc.edu>
316 : bates 410
317 :     * src/init.c (R_init_Matrix): Reorder calls to R_registerRoutines
318 :     and R_useDynamicSymbols (suggested by B.D.Ripley).
319 :    
320 : bates 835 2004-12-14 Douglas Bates <bates@wisc.edu>
321 : bates 392
322 :     * R/sscMatrix.R: Add determinant methods
323 :    
324 :     * src/triplet.[ch],src/init.c (triplet_to_matrix): Add a coercion
325 :     for tripletMatrix to matrix.
326 :    
327 : bates 835 2004-12-13 Douglas Bates <bates@wisc.edu>
328 : bates 388
329 : bates 392 * R/AllClass.R (.onLoad): Eliminate the bbCrosstab class, which is
330 :     no longer used.
331 :    
332 : bates 388 * src/R_ldl.c: Created an R-specific version of the ldl.[ch] files
333 :     with dynamic allocation of scratch arrays.
334 :    
335 :     * src/ssclme.c (ssclme_copy_ctab): Fixed bug in creation of ZtZ
336 :     for multivariate random effects with multiple grouping factors.
337 :     Fixes part but not all of #15.
338 :    
339 : bates 835 2004-12-03 Douglas Bates <bates@wisc.edu>
340 : bates 375
341 :     * src/lmeRep.c (lmeRep_factor): order of operations for multiple
342 :     scalar grouping factors corrected.
343 :    
344 : bates 835 2004-11-29 Douglas Bates <bates@wisc.edu>
345 : bates 375
346 :     * src/bCrosstab.c: remove diag_update which is no longer used
347 :    
348 : bates 835 2004-11-16 Douglas Bates <bates@wisc.edu>
349 : bates 350
350 :     * src/Metis_utils.c: Move metis.h include to C sources so that the
351 :     .h file can be included.
352 :    
353 : bates 835 2004-11-12 Douglas Bates <bates@wisc.edu>
354 : bates 342
355 : bates 350 * src/LU.c,geMatrix.c,trMatrix.c, etc.:
356 : bates 342 Complete allocation of slots in NEW_OBJECT.
357 :    
358 :     * src/Mutils.h: Moved list of symbols to an include file
359 :    
360 : bates 835 2004-11-11 Douglas Bates <bates@wisc.edu>
361 : bates 342
362 :     * src/geMutils.c (Matrix_init): remove unused function
363 :    
364 : bates 835 2004-11-10 Douglas Bates <bates@wisc.edu>
365 : bates 342
366 :     * src/cscMatrix.c (csc_to_imagemat): removed unused function
367 :    
368 : bates 835 2004-11-05 Douglas Bates <bates@wisc.edu>
369 : bates 327
370 :     * src/Makefile.win (SOURCES_C): Keep consistent with Makefile
371 :    
372 : bates 835 2004-10-27 Douglas Bates <bates@wisc.edu>
373 : bates 303
374 :     * R/pdmatrix.R: remove PACKAGE="Matrix" in .Call calls
375 :    
376 : bates 835 2004-10-04 Douglas Bates <bates@wisc.edu>
377 : bates 296
378 :     * src/init.c: Created R_init_Matrix and added registration of C
379 :     routines.
380 :    
381 : bates 835 2004-10-02 Douglas Bates <bates@wisc.edu>
382 : bates 283
383 :     * R/tripletMatrix.R: Force a require(lattice) for the image methods.
384 :    
385 : bates 835 2004-06-15 Douglas Bates <bates@wisc.edu>
386 : bates 229
387 :     * man/trMatrix-class.Rd: Escape the % chars in .Rd files.
388 :    
389 : bates 111 2004-04-20 Douglas Bates <bates@stat.wisc.edu>
390 :    
391 :     * src/Makefile.win ($(SHLIB)): Modifications per Uwe Ligges.
392 :    
393 : bates 109 2004-04-19 Douglas Bates <bates@stat.wisc.edu>
394 :    
395 :     * src/ssclme.c (ssclme_update_mm): fix logic error in
396 :     ssclme_update_mm
397 :    
398 : bates 105 2004-04-18 Douglas Bates <bates@stat.wisc.edu>
399 :    
400 :     * src/ssclme.c (ssclme_coef, ssclme_coefGets): Create consistency
401 :     in the order of unconstrained and constrained parameters.
402 :     (ssclme_gradient): Added the gradients (not yet correct for
403 :     multidimensional, unconstrained case).
404 :    
405 : bates 78 2004-04-14 Douglas Bates <bates@stat.wisc.edu>
406 :    
407 :     * src/ssclme.c (ssclme_EMsteps): Fix logic in REML update
408 :    
409 :     * src/Makefile.win: Remove unneeded ranlib call
410 :    
411 : bates 71 2004-04-12 Douglas Bates <bates@stat.wisc.edu>
412 :    
413 :     * DESCRIPTION (Version): New release
414 :    
415 :     * src/Makefile.win: Update Makefile.win to umfpack removal.
416 :    
417 : bates 49 2004-04-05 Douglas Bates <bates@bates2_home>
418 :    
419 :     * src/triplet_to_col.c: Create triplet_to_col as a native
420 : maechler 658 function, not the version from umfpack. There were problems with
421 : bates 49 the configuration of UMFPACK for 64-bit processors and there was
422 :     only one umfpack routine being used so I moved it here.
423 :    
424 : bates 45 2004-04-04 Douglas Bates <bates@bates2_home>
425 :    
426 :     * src/ssclme.c (ssclme_variances): New function.
427 :    
428 : bates 28 2004-03-28 Douglas Bates <bates@bates2_home>
429 :    
430 :     * src/ssclme.c (ssclme_fitted): Added function.
431 :    
432 : bates 22 2004-03-27 Douglas Bates <bates@bates2_home>
433 :    
434 :     * src/ssclme.c (ssclme_transfer_dimnames): Add new function to
435 :     store the dimnames in the XtX and bVar slots
436 :     (ssclme_update_mm): Change the dimensions of the bVar slot
437 :     components and the returned value from ssclme_ranef.
438 :    
439 : bates 10 2004-03-18 Douglas Bates <bates@stat.wisc.edu>
440 :    
441 :     * R/{pdMat.R,pdIdent.R,pdLogChol.R,pdMatrixLog.R,pdNatural.R},
442 :     src/{pdMat.c,pdIdent.c,pdLogChol.c,pdNatural.c},
443 :     tests/{pdCompSymm.R,pdDiag.R,pdIdent.R,pdLogChol.R,pdNatural.R},
444 :     man/{pdMat-class.Rd,pdmatrix-class.Rd,corrmatrix-class.Rd,
445 :     pdDiag-class.Rd,pdIdent-class.Rd,pdNatural-class.Rd,
446 :     pdLogChol-class.Rd,coefGets.Rd,pdCompSymm-class.Rd,
447 :     pdfactor-class.Rd,pdFactor.Rd,pdMatrix.Rd,
448 :     pdBlocked-class.Rd},AllClass.R,AllGeneric.R:
449 :     Moved the pdMat classes from the lme4 package.
450 :    
451 :     2004-03-02 Douglas Bates <bates@stat.wisc.edu>
452 :    
453 :     * man/ssclme-class.Rd: Update definition and documentation of the
454 :     ssclme class to include the DIsqrt slot.
455 :    
456 :     * src/ssclme.c (ssclme_deviance): Modify order of computation
457 :     (much faster using dsyrk, a level 3 BLAS routine).
458 :    
459 :     * src/Makefile (SUBLIBS): Change definition (K. Hornik)
460 :    
461 :     2004-02-28 Douglas Bates <bates@stat.wisc.edu>
462 :    
463 :     * tests/ssclme.R: Modify the test to account for the permutation
464 :     of the levels of the grouping factors.
465 :    
466 :     2004-02-23 Douglas Bates <bates@stat.wisc.edu>
467 :    
468 :     * R/ssclme.R,src/ssclme.c (ssclme): Move slots of sscCrosstab slot
469 :     directly into the ssclme class definition.
470 :    
471 :     2004-02-22 Douglas Bates <bates@stat.wisc.edu>
472 :    
473 :     * DESCRIPTION (Date): New release
474 :    
475 :     * man/ssclme-class.Rd: new file.
476 :    
477 :     * src/ssclme.c (ssclme_loglik): major revisions in design. It
478 :     works and it's fast!
479 :    
480 :     2004-02-17 Douglas Bates <bates@stat.wisc.edu>
481 :    
482 :     * src/taucs/Makefile.win (lib): Change "ar" to "$(AR)" (B.Ripley)
483 :    
484 :     2004-02-16 Douglas Bates <bates@stat.wisc.edu>
485 :    
486 :     * DESCRIPTION (Date): New release
487 :    
488 :     * NAMESPACE: Don't export ssclme.
489 :    
490 :     * data/ScotsSec.rda, man/ScotsSec.Rd: Add Scottish secondary
491 :     school data.
492 :    
493 :     2004-02-11 Douglas Bates <bates@stat.wisc.edu>
494 :    
495 :     * src/sscCrosstab.c (sscCrosstab): Added a row to the incidence to
496 :     keep track of the fixed-effects and the response. Counts also
497 :     gets an extra element, which is always one.
498 :    
499 :     * src/ldl.c: Include these routines from Tim Davis' LDL package.
500 :    
501 :     2004-02-10 Douglas Bates <bates@stat.wisc.edu>
502 :    
503 :     * src/cscMatrix.c (csc_transpose): new function
504 :    
505 :     * src/Mutils.c (csc_sort_columns): perm/iperm confusion corrected
506 :     (csc_components_transpose): new function
507 :    
508 :     2004-02-06 Douglas Bates <bates@stat.wisc.edu>
509 :    
510 :     * src/triplet.c (triplet_validate): Fix Dim slot on generated
511 :     triplets
512 :    
513 :     2004-01-30 Douglas Bates <bates@stat.wisc.edu>
514 :    
515 :     * R/sscCrosstab.R (sscCrosstab): Added sscCrosstab generator function.
516 :    
517 :     * src/LU.h (MATRIX_LU_H): Add #ifndef #define ... #endif to this
518 :     and all other .h files in src.
519 :    
520 :     * src/Makefile.win: This and other Makefile.win files contributed
521 :     by Brian Ripley.
522 :    
523 :     2004-01-27 Douglas Bates <bates@stat.wisc.edu>
524 :    
525 :     * R/syMatrix.R: Added methods for "%*%".
526 :    
527 :     * R/Hilbert.R (Hilbert): Changed Hilbert function to return a
528 :     poMatrix object.
529 :    
530 :     2004-01-26 Douglas Bates <bates@stat.wisc.edu>
531 :    
532 :     * man/sscChol-class.Rd,man/mm.Rd,man/y.Rd: Added man pages.
533 :    
534 :     2004-01-25 Douglas Bates <bates@bates2_home>
535 :    
536 :     * inst/doc/Introduction.Rnw,Comparisons.Rnw: Added vignettes.
537 :    
538 :     * R/csc.R: Convert all cscMatrix classes to use Dim slot instead
539 :     of nrow.
540 :    
541 :     2003-12-31 Douglas Bates <bates@stat.wisc.edu>
542 :    
543 :     * src/taucs/taucs.h: Moved taucs.h, amd.h, and umfpack.h into
544 :     subdirectories.
545 :    
546 :     2003-12-08 Douglas Bates <bates@stat.wisc.edu>
547 :    
548 :     * src/taucs.h: Accidently referred to global header files
549 :     instead of local files.
550 :    
551 :     2003-12-04 Douglas Bates <bates@stat.wisc.edu>
552 :    
553 :     * R/AllClass.R: Lots of changes. Removed all the lapack++ code
554 :     and methods and replaced all classes with S4 classes.
555 :    
556 :     2003-04-19 Douglas Bates <bates@stat.wisc.edu>
557 :    
558 :     * R/det.R,man/det.Rd: Change name of det generic to determinant
559 :    
560 :     * src/R_LapackPP.cc: Change method of calculating determinants
561 :    
562 :     2003-02-03 Douglas Bates <bates@stat.wisc.edu>
563 :    
564 :     * DESCRIPTION (Version): removed empty data directory as requested
565 :     by CRAN maintainers. Changed version number and date.
566 :    
567 :     2002-10-23 Douglas Bates <bates@stat.wisc.edu>
568 :    
569 :     * src/laindex.h: Applied patches from Brian Ripley for compilation
570 :     under Windows.
571 :    
572 :     * Added configure.win and src/Makevars.win as requested by Brian
573 :     Ripley.
574 :    
575 :     2002-05-03 Douglas Bates <bates@stat.wisc.edu>
576 :    
577 :     * src/lamatrix.h: Removing pre-1.2.0 compatibility code per Kurt
578 :     Hornik.
579 :    
580 :     2002-04-24 Douglas Bates <bates@stat.wisc.edu>
581 :    
582 :     * configure.ac: Replaced configure.in with configure.ac
583 :     contributed by Kurt Hornik.
584 :    
585 :     * aclocal.m4 (ac_clean_files): Replaced this with Kurt Hornik's
586 :     version for R-1.5.0
587 :    
588 : maechler 512
589 : bates 10 2001-12-10 Douglas Bates <bates@stat.wisc.edu>
590 :    
591 :     * man/eigen.Rd: Removed the .Alias in the example

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