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Annotation of /pkg/ChangeLog

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Revision 871 - (view) (download)

1 : maechler 871 2005-08-26 Martin Maechler <maechler@stat.math.ethz.ch>
2 :    
3 :     * R/Matrix.R: added first "[<-" methods; not yet functional
4 :     * R/denseMatrix.R: dito
5 :     * man/Subassign-methods.Rd: new help file for these
6 :    
7 :     2005-08-25 Martin Maechler <maechler@stat.math.ethz.ch>
8 :    
9 :     * DESCRIPTION (Version): 0.98-6
10 :    
11 :     * R/denseMatrix.R: new file for "[" fallback methods for all dense
12 :     matrices.
13 :    
14 : maechler 868 2005-08-19 Martin Maechler <maechler@stat.math.ethz.ch>
15 :    
16 :     * src/lgCMatrix.c (lcsc_to_matrix): new; need for
17 :     as( <logical>, "matrix")
18 :    
19 :     * R/pMatrix.R: coercion to "lgTMatrix"
20 :    
21 :     * R/gTMatrix.R: new virtual class to define "[" methods for.
22 :     * man/gTMatrix-class.Rd:
23 :     * General slight re-organization of where "[" methods are defined.
24 :     more to come.
25 :    
26 : maechler 871 2005-08-18 Douglas Bates <bates@wisc.edu>
27 : maechler 868
28 : maechler 871 * DESCRIPTION (Version): 0.98-5 released to CRAN
29 :    
30 :     * src/dgTMatrix.c (graphNEL_as_dgTMatrix): add first graphNEL methods
31 :     * .....
32 :    
33 : bates 863 2005-08-18 Douglas Bates <bates@localhost.localdomain>
34 :    
35 :     * R/lmer.R: Corrected naming scheme in mcmcsamp to work with lmer
36 :     or glmer objects.
37 :    
38 : maechler 860 2005-08-17 Martin Maechler <maechler@stat.math.ethz.ch>
39 :    
40 :     * DESCRIPTION (Version): 0.98-4 : upload to CRAN
41 :    
42 :     2005-08-16 Douglas Bates <bates@localhost.localdomain>
43 :    
44 :     * R/HBMM.R: finish re-writing R-only code.
45 :    
46 : bates 854 2005-08-15 Douglas Bates <bates@localhost.localdomain>
47 :    
48 :     * man/externalFormats.Rd: move documentation for writeHB and
49 :     writeMM here.
50 :    
51 :     * src/mmio.c: replace inclusion of <malloc.h> by <stdlib.h>
52 :     (suggested by Paul Roecker).
53 :    
54 :     * tests/validObj.R (assertError): Comment out test that is failing
55 :     after recent changes in r-devel.
56 :    
57 : maechler 860
58 : maechler 848 2005-08-11 Martin Maechler <maechler@stat.math.ethz.ch>
59 :    
60 :     * R/AllClass.R: intermediate virtual class "denseMatrix"
61 :     * man/denseMatrix-class.Rd
62 :     * NAMESPACE: export it, and also export
63 :     * man/unused-classes.Rd: "iMatrix", "zMatrix" and "ldenseMatrix"
64 :    
65 : bates 846 2005-08-10 Douglas Bates <bates@wisc.edu>
66 :    
67 : maechler 848 * DESCRIPTION (Version): 0.98-3 to CRAN
68 :    
69 : bates 846 * src/dtrMatrix.c (dtrMatrix_validate): fixed up validation and
70 :     matrix_solve code (which was really, really wrong).
71 :    
72 : bates 835 2005-08-07 Douglas Bates <bates@wisc.edu>
73 : maechler 834
74 :     * DESCRIPTION (Version): 0.98-2
75 :    
76 :     * R/HBMM.R (readHB), (readMM): read Matrix Market formats
77 :    
78 :     * R/lmer.R (abbrvNms): new
79 :     * R/lmer.R (mcmcsamp): allow transformed parameters
80 : bates 835 * src/HBMM.c (Matrix_writeMatrixMarket): Added read/write routines
81 :     for the Harwell-Boeing and the MatrixMarket formats.
82 : maechler 834
83 :     2005-08-04 Martin Maechler <maechler@stat.math.ethz.ch>
84 :    
85 :     * man/dtrMatrix-class.Rd: add examples
86 : bates 835 * man/dtpMatrix-class.Rd: ditto; plus note about PROBLEM
87 : maechler 834
88 :     * TODO: note the dtpMatrix (docu) bug
89 :    
90 :     * R/zzz.R (.onLoad): assignInNamespace("as.matrix", *, "base")
91 :     in order to ensure that new as.matrix() is used by old functions,
92 :     e.g., svd(), qr(), eigen(), dist(),..;
93 :     apply(), also matplot() or pairs().
94 :    
95 :    
96 :     2005-08-03 Martin Maechler <maechler@stat.math.ethz.ch>
97 :    
98 :     * R/lmer.R: add 'fixme' comments and move the linear vs glm check;
99 :     add comments about 'control' / lmerControl() arguments
100 :    
101 : bates 835 2005-07-27 Douglas Bates <bates@wisc.edu>
102 : bates 820
103 : bates 835 * man/sleepstudy.Rd: Added the sleep data set.
104 : maechler 834 * DESCRIPTION (Version): 0.98-1 released to CRAN
105 : bates 820
106 : bates 835 2005-07-12 Douglas Bates <bates@wisc.edu>
107 : maechler 834 * man/sleepstudy.Rd: Added the sleep data set.
108 :    
109 : bates 809 * R/lmer.R (glmmMCMC): Added PACKAGE = "Matrix" in a couple of
110 :     .Call calls that were producing spurious output.
111 :    
112 : bates 835 2005-07-05 Douglas Bates <bates@wisc.edu>
113 : bates 801
114 :     * R/lmer.R (lmer): stored updated variance component estimates in
115 :     mer object for the generalized model. (Bug reported by Renaud
116 :     Lancelot).
117 :    
118 : bates 835 2005-07-03 Douglas Bates <bates@wisc.edu>
119 : bates 794
120 :     * src/lmer.c (glmer_devAGQ): Added AGQ for single grouping factor,
121 :     unidimensional case.
122 :    
123 : bates 835 2005-06-08 Douglas Bates <bates@wisc.edu>
124 : maechler 791
125 :     * DESCRIPTION (Version): 0.96-1
126 :    
127 :     * moved lmer-class' R and C code moved from lme4 to here
128 :    
129 : bates 835 2005-06-04 Douglas Bates <bates@wisc.edu>
130 : bates 763
131 :     * R/dgCMatrix.R: Call to csc_matrix_mm used undefined arguments
132 :     (reported by Guissepe Ragusa <gragusa@ucsd.edu>)
133 :    
134 : bates 835 2005-06-02 Douglas Bates <bates@wisc.edu>
135 : bates 763
136 :     * src/Makefile.win: Forgot to update this when Makefile changed.
137 :    
138 : bates 835 2005-05-11 Douglas Bates <bates@wisc.edu>
139 : bates 726
140 :     * src/dgCMatrix.c (csc_transpose): Simplified function fixing a
141 :     bug reported by Kurt Hornik and Michael Hahsler.
142 :    
143 : bates 835 2005-05-10 Douglas Bates <bates@wisc.edu>
144 : bates 725
145 :     * src/lgCMatrix.c (Matrix_lgClgCmm): Implementation of methods for
146 :     logical sparse matrices. These will also be used in the symbolic
147 :     analysis for lmer objects.
148 :    
149 :     * src/dsCMatrix.c (dsCMatrix_matrix_solve): Copied the dimensions
150 :     of b to the result. Fixes bug reported by Jean.Coursol@math.u-psud.fr
151 : maechler 791
152 : bates 835 2005-05-06 Douglas Bates <bates@wisc.edu>
153 : bates 714
154 :     * src/dgeMatrix.c (dgeMatrix_colsums): Added an implementation of
155 :     colMeans, colSums, rowMeans and rowSums.
156 :    
157 : bates 835 2005-04-18 Douglas Bates <bates@wisc.edu>
158 : bates 692
159 :     * src/lgCMatrix.[ch]: code for _validate method and stub for
160 :     multiplication operation.
161 :    
162 :     * src/dgeMatrix.c (dgeMatrix_matrix_solve): Passing wrong argument
163 :     to dgetrs.
164 :    
165 :     * src/init.c: Fix cut-and-paste error in definition of
166 :     dgeMatrix_matrix_solve
167 :    
168 :     * src/{many files}: Tighten code by using ALLOC_SLOT.
169 :    
170 : bates 835 2005-04-15 Douglas Bates <bates@wisc.edu>
171 : bates 692
172 :     * R/AllClass.R: Add lgTMatrix and lgCMatrix classes
173 :    
174 :     * DESCRIPTION: Eliminate import of stats.
175 :    
176 : maechler 791
177 : bates 835 2005-04-06 Douglas Bates <bates@wisc.edu>
178 : bates 692
179 :     * R/AllClass.R : add logical sparse matrix classes
180 :    
181 : maechler 687 2005-04-01 Martin Maechler <maechler@stat.math.ethz.ch>
182 :    
183 :     * R/dgTMatrix.R: add "[" method for triplet matrices
184 :     * R/sparseMatrix.R: and other sparse ones; --> add show() for sparse
185 :    
186 : bates 835 2005-03-31 Douglas Bates <bates@wisc.edu>
187 : maechler 687
188 :     * DESCRIPTION (Version): release 0.95-5 to CRAN
189 :    
190 :     * R/dMatrix.R: add %*%, crossprod and solve "fallback" methods
191 :     * R/sparseMatrix.R: %*%, crossprod()
192 :     * R/dgeMatrix.R: more "fallback" methods for numeric/dense matrices
193 :     * man/*.Rd: move method definitions to 'Matrix' and 'dMatrix'
194 :     * src/lmer.c (lmer_fitted): fix thinko
195 :    
196 : maechler 676 2005-03-26 Martin Maechler <maechler@stat.math.ethz.ch>
197 :    
198 :     * R/AllClass.R: add two virtual sparse classes ``on top''
199 :    
200 :     2005-03-24 Martin Maechler <maechler@stat.math.ethz.ch>
201 :    
202 :     * R/AllClass.R (setClass): use "VIRTUAL" for the virtual classes;
203 :     correspondingly fix examples and tests/ since new()
204 :     doesn't work for virtual classes.
205 :    
206 : maechler 658 2005-03-17 Martin Maechler <maechler@stat.math.ethz.ch>
207 :    
208 :     * R/Matrix.R (as.matrix): method and one for unname()
209 :     * tests/dpoMatrix.R: tests should now be less platform dependent;
210 :     also run for R 2.1.0; using as.matrix()
211 :    
212 : bates 835 2005-03-15 Douglas Bates <bates@wisc.edu>
213 : maechler 658
214 :     * R/pMatrix.R: "pMatrix" class added
215 :     * ....
216 :    
217 : bates 835 2005-03-14 Douglas Bates <bates@wisc.edu>
218 : bates 645
219 :     * R/dtpMatrix.R: Add unpack method and an example.
220 :    
221 :     * src/dsyMatrix.c (dsyMatrix_trf): Add BunchKaufman factorization
222 :     of general symmetric matrices and associated S4 methods.
223 :    
224 : maechler 658 2005-03-10 Martin Maechler <maechler@stat.math.ethz.ch>
225 :     +
226 :     2005-03-05 Martin Maechler <maechler@stat.math.ethz.ch>
227 :    
228 :     * R/dgeMatrix.R (setAs): and many other files: more coercion,
229 :     crossprod() and "%*%" methods added; tests, too.
230 :     * tests/matprod.R: new, for testing these
231 :    
232 : bates 835 2005-03-03 Douglas Bates <bates@wisc.edu>
233 : bates 599
234 :     * src/lmer.c (lmer_fitted): Added.
235 :    
236 : bates 835 2005-03-02 Douglas Bates <bates@wisc.edu>
237 : bates 596
238 :     * R/dsTMatrix.R: Conversion from dsTMatrix to dsCMatrix
239 :    
240 : bates 835 2005-02-28 Douglas Bates <bates@wisc.edu>
241 : bates 582
242 :     * src/*.c,po/,inst/po: Internationalization and localization of
243 :     the package.
244 :    
245 :     * src/ldl.[ch]: Removed these as their contents are referenced in the
246 :     R_ldl.c file.
247 :    
248 :     * src/flame.[ch]: Removed these source files.
249 : maechler 658
250 : bates 582 * src/dtrMatrix.c (make_array_triangular): Move to Mutils
251 :    
252 :     * src/LU.[ch],src/init.c: absorb in factorizations
253 :    
254 :     * src/Mutils.h: prepare for internationalization
255 :    
256 :     * src/cblas.h: move the enum definitions to Mutils.h and remove
257 :     this file
258 :    
259 : maechler 578 2005-02-26 Martin Maechler <maechler@stat.math.ethz.ch>
260 :    
261 : maechler 579 * R/dgeMatrix.R: provide "dimnames" and "dimnames<-" methods
262 :    
263 :     * R/dtrMatrix.R: fix t() method
264 :    
265 : maechler 578 * R/dgeMatrix.R: define group methods "Arith", "Math", "Math2"
266 : maechler 658 * NAMESPACE: export them (and import generics from "methods")
267 : maechler 578 * tests/group-methods.R : and test them.
268 :    
269 :     * src/dtrMatrix.c (dtrMatrix_as_dgeMatrix): prevent seg.fault in
270 :     border case
271 :    
272 :     2005-02-24 Douglas Bates <bates@stat.wisc.edu>
273 :    
274 : maechler 658 * DESCRIPTION (Version): 0.95-2 released to CRAN
275 : maechler 578
276 :     * src/dgBCMatrix.c:
277 :     * src/lmer.c: many changes
278 :     * ...
279 :    
280 : maechler 512 2005-02-04 Martin Maechler <maechler@stat.math.ethz.ch>
281 :    
282 :     * R/Matrix.R: add more sophisticated show() method.
283 :    
284 : maechler 578 2005-02-02 Douglas Bates <bates@stat.wisc.edu>
285 :    
286 :     * */* : almost complete reorganization of classes.
287 :    
288 : bates 835 2005-01-26 Douglas Bates <bates@wisc.edu>
289 : bates 460
290 :     * R/AllGeneric.R: Added matrix exponential generic expm and a method
291 :     for the geMatrix class.
292 :    
293 : bates 835 2005-01-24 Douglas Bates <bates@wisc.edu>
294 : bates 460
295 :     * src/Makefile (clean): Remove *.a and *.so
296 :    
297 :     * man/cscBlocked-class.Rd: Remove reference to the lmer-class.
298 :    
299 : bates 835 2005-01-23 Douglas Bates <bates@wisc.edu>
300 : bates 460
301 : maechler 658 * src/lmer.c (Lind): Definition of Lind was backwards. This only
302 : bates 460 had an effect in cases with more than 2 grouping factors.
303 :    
304 : bates 835 2005-01-03 Douglas Bates <bates@wisc.edu>
305 : bates 415
306 :     * src/lmeRep.c (lmer_variances): change from lmeRep to lmer
307 :    
308 : bates 835 2004-12-23 Douglas Bates <bates@wisc.edu>
309 : bates 410
310 :     * src/init.c (R_init_Matrix): Reorder calls to R_registerRoutines
311 :     and R_useDynamicSymbols (suggested by B.D.Ripley).
312 :    
313 : bates 835 2004-12-14 Douglas Bates <bates@wisc.edu>
314 : bates 392
315 :     * R/sscMatrix.R: Add determinant methods
316 :    
317 :     * src/triplet.[ch],src/init.c (triplet_to_matrix): Add a coercion
318 :     for tripletMatrix to matrix.
319 :    
320 : bates 835 2004-12-13 Douglas Bates <bates@wisc.edu>
321 : bates 388
322 : bates 392 * R/AllClass.R (.onLoad): Eliminate the bbCrosstab class, which is
323 :     no longer used.
324 :    
325 : bates 388 * src/R_ldl.c: Created an R-specific version of the ldl.[ch] files
326 :     with dynamic allocation of scratch arrays.
327 :    
328 :     * src/ssclme.c (ssclme_copy_ctab): Fixed bug in creation of ZtZ
329 :     for multivariate random effects with multiple grouping factors.
330 :     Fixes part but not all of #15.
331 :    
332 : bates 835 2004-12-03 Douglas Bates <bates@wisc.edu>
333 : bates 375
334 :     * src/lmeRep.c (lmeRep_factor): order of operations for multiple
335 :     scalar grouping factors corrected.
336 :    
337 : bates 835 2004-11-29 Douglas Bates <bates@wisc.edu>
338 : bates 375
339 :     * src/bCrosstab.c: remove diag_update which is no longer used
340 :    
341 : bates 835 2004-11-16 Douglas Bates <bates@wisc.edu>
342 : bates 350
343 :     * src/Metis_utils.c: Move metis.h include to C sources so that the
344 :     .h file can be included.
345 :    
346 : bates 835 2004-11-12 Douglas Bates <bates@wisc.edu>
347 : bates 342
348 : bates 350 * src/LU.c,geMatrix.c,trMatrix.c, etc.:
349 : bates 342 Complete allocation of slots in NEW_OBJECT.
350 :    
351 :     * src/Mutils.h: Moved list of symbols to an include file
352 :    
353 : bates 835 2004-11-11 Douglas Bates <bates@wisc.edu>
354 : bates 342
355 :     * src/geMutils.c (Matrix_init): remove unused function
356 :    
357 : bates 835 2004-11-10 Douglas Bates <bates@wisc.edu>
358 : bates 342
359 :     * src/cscMatrix.c (csc_to_imagemat): removed unused function
360 :    
361 : bates 835 2004-11-05 Douglas Bates <bates@wisc.edu>
362 : bates 327
363 :     * src/Makefile.win (SOURCES_C): Keep consistent with Makefile
364 :    
365 : bates 835 2004-10-27 Douglas Bates <bates@wisc.edu>
366 : bates 303
367 :     * R/pdmatrix.R: remove PACKAGE="Matrix" in .Call calls
368 :    
369 : bates 835 2004-10-04 Douglas Bates <bates@wisc.edu>
370 : bates 296
371 :     * src/init.c: Created R_init_Matrix and added registration of C
372 :     routines.
373 :    
374 : bates 835 2004-10-02 Douglas Bates <bates@wisc.edu>
375 : bates 283
376 :     * R/tripletMatrix.R: Force a require(lattice) for the image methods.
377 :    
378 : bates 835 2004-06-15 Douglas Bates <bates@wisc.edu>
379 : bates 229
380 :     * man/trMatrix-class.Rd: Escape the % chars in .Rd files.
381 :    
382 : bates 111 2004-04-20 Douglas Bates <bates@stat.wisc.edu>
383 :    
384 :     * src/Makefile.win ($(SHLIB)): Modifications per Uwe Ligges.
385 :    
386 : bates 109 2004-04-19 Douglas Bates <bates@stat.wisc.edu>
387 :    
388 :     * src/ssclme.c (ssclme_update_mm): fix logic error in
389 :     ssclme_update_mm
390 :    
391 : bates 105 2004-04-18 Douglas Bates <bates@stat.wisc.edu>
392 :    
393 :     * src/ssclme.c (ssclme_coef, ssclme_coefGets): Create consistency
394 :     in the order of unconstrained and constrained parameters.
395 :     (ssclme_gradient): Added the gradients (not yet correct for
396 :     multidimensional, unconstrained case).
397 :    
398 : bates 78 2004-04-14 Douglas Bates <bates@stat.wisc.edu>
399 :    
400 :     * src/ssclme.c (ssclme_EMsteps): Fix logic in REML update
401 :    
402 :     * src/Makefile.win: Remove unneeded ranlib call
403 :    
404 : bates 71 2004-04-12 Douglas Bates <bates@stat.wisc.edu>
405 :    
406 :     * DESCRIPTION (Version): New release
407 :    
408 :     * src/Makefile.win: Update Makefile.win to umfpack removal.
409 :    
410 : bates 49 2004-04-05 Douglas Bates <bates@bates2_home>
411 :    
412 :     * src/triplet_to_col.c: Create triplet_to_col as a native
413 : maechler 658 function, not the version from umfpack. There were problems with
414 : bates 49 the configuration of UMFPACK for 64-bit processors and there was
415 :     only one umfpack routine being used so I moved it here.
416 :    
417 : bates 45 2004-04-04 Douglas Bates <bates@bates2_home>
418 :    
419 :     * src/ssclme.c (ssclme_variances): New function.
420 :    
421 : bates 28 2004-03-28 Douglas Bates <bates@bates2_home>
422 :    
423 :     * src/ssclme.c (ssclme_fitted): Added function.
424 :    
425 : bates 22 2004-03-27 Douglas Bates <bates@bates2_home>
426 :    
427 :     * src/ssclme.c (ssclme_transfer_dimnames): Add new function to
428 :     store the dimnames in the XtX and bVar slots
429 :     (ssclme_update_mm): Change the dimensions of the bVar slot
430 :     components and the returned value from ssclme_ranef.
431 :    
432 : bates 10 2004-03-18 Douglas Bates <bates@stat.wisc.edu>
433 :    
434 :     * R/{pdMat.R,pdIdent.R,pdLogChol.R,pdMatrixLog.R,pdNatural.R},
435 :     src/{pdMat.c,pdIdent.c,pdLogChol.c,pdNatural.c},
436 :     tests/{pdCompSymm.R,pdDiag.R,pdIdent.R,pdLogChol.R,pdNatural.R},
437 :     man/{pdMat-class.Rd,pdmatrix-class.Rd,corrmatrix-class.Rd,
438 :     pdDiag-class.Rd,pdIdent-class.Rd,pdNatural-class.Rd,
439 :     pdLogChol-class.Rd,coefGets.Rd,pdCompSymm-class.Rd,
440 :     pdfactor-class.Rd,pdFactor.Rd,pdMatrix.Rd,
441 :     pdBlocked-class.Rd},AllClass.R,AllGeneric.R:
442 :     Moved the pdMat classes from the lme4 package.
443 :    
444 :     2004-03-02 Douglas Bates <bates@stat.wisc.edu>
445 :    
446 :     * man/ssclme-class.Rd: Update definition and documentation of the
447 :     ssclme class to include the DIsqrt slot.
448 :    
449 :     * src/ssclme.c (ssclme_deviance): Modify order of computation
450 :     (much faster using dsyrk, a level 3 BLAS routine).
451 :    
452 :     * src/Makefile (SUBLIBS): Change definition (K. Hornik)
453 :    
454 :     2004-02-28 Douglas Bates <bates@stat.wisc.edu>
455 :    
456 :     * tests/ssclme.R: Modify the test to account for the permutation
457 :     of the levels of the grouping factors.
458 :    
459 :     2004-02-23 Douglas Bates <bates@stat.wisc.edu>
460 :    
461 :     * R/ssclme.R,src/ssclme.c (ssclme): Move slots of sscCrosstab slot
462 :     directly into the ssclme class definition.
463 :    
464 :     2004-02-22 Douglas Bates <bates@stat.wisc.edu>
465 :    
466 :     * DESCRIPTION (Date): New release
467 :    
468 :     * man/ssclme-class.Rd: new file.
469 :    
470 :     * src/ssclme.c (ssclme_loglik): major revisions in design. It
471 :     works and it's fast!
472 :    
473 :     2004-02-17 Douglas Bates <bates@stat.wisc.edu>
474 :    
475 :     * src/taucs/Makefile.win (lib): Change "ar" to "$(AR)" (B.Ripley)
476 :    
477 :     2004-02-16 Douglas Bates <bates@stat.wisc.edu>
478 :    
479 :     * DESCRIPTION (Date): New release
480 :    
481 :     * NAMESPACE: Don't export ssclme.
482 :    
483 :     * data/ScotsSec.rda, man/ScotsSec.Rd: Add Scottish secondary
484 :     school data.
485 :    
486 :     2004-02-11 Douglas Bates <bates@stat.wisc.edu>
487 :    
488 :     * src/sscCrosstab.c (sscCrosstab): Added a row to the incidence to
489 :     keep track of the fixed-effects and the response. Counts also
490 :     gets an extra element, which is always one.
491 :    
492 :     * src/ldl.c: Include these routines from Tim Davis' LDL package.
493 :    
494 :     2004-02-10 Douglas Bates <bates@stat.wisc.edu>
495 :    
496 :     * src/cscMatrix.c (csc_transpose): new function
497 :    
498 :     * src/Mutils.c (csc_sort_columns): perm/iperm confusion corrected
499 :     (csc_components_transpose): new function
500 :    
501 :     2004-02-06 Douglas Bates <bates@stat.wisc.edu>
502 :    
503 :     * src/triplet.c (triplet_validate): Fix Dim slot on generated
504 :     triplets
505 :    
506 :     2004-01-30 Douglas Bates <bates@stat.wisc.edu>
507 :    
508 :     * R/sscCrosstab.R (sscCrosstab): Added sscCrosstab generator function.
509 :    
510 :     * src/LU.h (MATRIX_LU_H): Add #ifndef #define ... #endif to this
511 :     and all other .h files in src.
512 :    
513 :     * src/Makefile.win: This and other Makefile.win files contributed
514 :     by Brian Ripley.
515 :    
516 :     2004-01-27 Douglas Bates <bates@stat.wisc.edu>
517 :    
518 :     * R/syMatrix.R: Added methods for "%*%".
519 :    
520 :     * R/Hilbert.R (Hilbert): Changed Hilbert function to return a
521 :     poMatrix object.
522 :    
523 :     2004-01-26 Douglas Bates <bates@stat.wisc.edu>
524 :    
525 :     * man/sscChol-class.Rd,man/mm.Rd,man/y.Rd: Added man pages.
526 :    
527 :     2004-01-25 Douglas Bates <bates@bates2_home>
528 :    
529 :     * inst/doc/Introduction.Rnw,Comparisons.Rnw: Added vignettes.
530 :    
531 :     * R/csc.R: Convert all cscMatrix classes to use Dim slot instead
532 :     of nrow.
533 :    
534 :     2003-12-31 Douglas Bates <bates@stat.wisc.edu>
535 :    
536 :     * src/taucs/taucs.h: Moved taucs.h, amd.h, and umfpack.h into
537 :     subdirectories.
538 :    
539 :     2003-12-08 Douglas Bates <bates@stat.wisc.edu>
540 :    
541 :     * src/taucs.h: Accidently referred to global header files
542 :     instead of local files.
543 :    
544 :     2003-12-04 Douglas Bates <bates@stat.wisc.edu>
545 :    
546 :     * R/AllClass.R: Lots of changes. Removed all the lapack++ code
547 :     and methods and replaced all classes with S4 classes.
548 :    
549 :     2003-04-19 Douglas Bates <bates@stat.wisc.edu>
550 :    
551 :     * R/det.R,man/det.Rd: Change name of det generic to determinant
552 :    
553 :     * src/R_LapackPP.cc: Change method of calculating determinants
554 :    
555 :     2003-02-03 Douglas Bates <bates@stat.wisc.edu>
556 :    
557 :     * DESCRIPTION (Version): removed empty data directory as requested
558 :     by CRAN maintainers. Changed version number and date.
559 :    
560 :     2002-10-23 Douglas Bates <bates@stat.wisc.edu>
561 :    
562 :     * src/laindex.h: Applied patches from Brian Ripley for compilation
563 :     under Windows.
564 :    
565 :     * Added configure.win and src/Makevars.win as requested by Brian
566 :     Ripley.
567 :    
568 :     2002-05-03 Douglas Bates <bates@stat.wisc.edu>
569 :    
570 :     * src/lamatrix.h: Removing pre-1.2.0 compatibility code per Kurt
571 :     Hornik.
572 :    
573 :     2002-04-24 Douglas Bates <bates@stat.wisc.edu>
574 :    
575 :     * configure.ac: Replaced configure.in with configure.ac
576 :     contributed by Kurt Hornik.
577 :    
578 :     * aclocal.m4 (ac_clean_files): Replaced this with Kurt Hornik's
579 :     version for R-1.5.0
580 :    
581 : maechler 512
582 : bates 10 2001-12-10 Douglas Bates <bates@stat.wisc.edu>
583 :    
584 :     * man/eigen.Rd: Removed the .Alias in the example

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