SCM

SCM Repository

[matrix] Annotation of /pkg/ChangeLog
ViewVC logotype

Annotation of /pkg/ChangeLog

Parent Directory Parent Directory | Revision Log Revision Log


Revision 415 - (view) (download)

1 : bates 415 2005-01-03 Douglas Bates <bates@bates1-home>
2 :    
3 :     * src/lmeRep.c (lmer_variances): change from lmeRep to lmer
4 :    
5 : bates 410 2004-12-23 Douglas Bates <bates@bates1-home>
6 :    
7 :     * src/init.c (R_init_Matrix): Reorder calls to R_registerRoutines
8 :     and R_useDynamicSymbols (suggested by B.D.Ripley).
9 :    
10 : bates 392 2004-12-14 Douglas Bates <bates@bates1-home>
11 :    
12 :     * R/sscMatrix.R: Add determinant methods
13 :    
14 :     * src/triplet.[ch],src/init.c (triplet_to_matrix): Add a coercion
15 :     for tripletMatrix to matrix.
16 :    
17 : bates 388 2004-12-13 Douglas Bates <bates@bates1-home>
18 :    
19 : bates 392 * R/AllClass.R (.onLoad): Eliminate the bbCrosstab class, which is
20 :     no longer used.
21 :    
22 : bates 388 * src/R_ldl.c: Created an R-specific version of the ldl.[ch] files
23 :     with dynamic allocation of scratch arrays.
24 :    
25 :     * src/ssclme.c (ssclme_copy_ctab): Fixed bug in creation of ZtZ
26 :     for multivariate random effects with multiple grouping factors.
27 :     Fixes part but not all of #15.
28 :    
29 : bates 375 2004-12-03 Douglas Bates <bates@bates1-home>
30 :    
31 :     * src/lmeRep.c (lmeRep_factor): order of operations for multiple
32 :     scalar grouping factors corrected.
33 :    
34 :     2004-11-29 Douglas Bates <bates@bates1-home>
35 :    
36 :     * src/bCrosstab.c: remove diag_update which is no longer used
37 :    
38 : bates 350 2004-11-16 Douglas Bates <bates@bates1-home>
39 :    
40 :     * src/Metis_utils.c: Move metis.h include to C sources so that the
41 :     .h file can be included.
42 :    
43 : bates 342 2004-11-12 Douglas Bates <bates@bates1-home>
44 :    
45 : bates 350 * src/LU.c,geMatrix.c,trMatrix.c, etc.:
46 : bates 342 Complete allocation of slots in NEW_OBJECT.
47 :    
48 :     * src/Mutils.h: Moved list of symbols to an include file
49 :    
50 :     2004-11-11 Douglas Bates <bates@bates1-home>
51 :    
52 :     * src/geMutils.c (Matrix_init): remove unused function
53 :    
54 :     2004-11-10 Douglas Bates <bates@bates1-home>
55 :    
56 :     * src/cscMatrix.c (csc_to_imagemat): removed unused function
57 :    
58 : bates 327 2004-11-05 Douglas Bates <bates@bates1-home>
59 :    
60 :     * src/Makefile.win (SOURCES_C): Keep consistent with Makefile
61 :    
62 : bates 303 2004-10-27 Douglas Bates <bates@bates1-home>
63 :    
64 :     * R/pdmatrix.R: remove PACKAGE="Matrix" in .Call calls
65 :    
66 : bates 296 2004-10-04 Douglas Bates <bates@bates1-home>
67 :    
68 :     * src/init.c: Created R_init_Matrix and added registration of C
69 :     routines.
70 :    
71 : bates 283 2004-10-02 Douglas Bates <bates@bates1-home>
72 :    
73 :     * R/tripletMatrix.R: Force a require(lattice) for the image methods.
74 :    
75 : bates 229 2004-06-15 Douglas Bates <bates@bates7>
76 :    
77 :     * man/trMatrix-class.Rd: Escape the % chars in .Rd files.
78 :    
79 : bates 111 2004-04-20 Douglas Bates <bates@stat.wisc.edu>
80 :    
81 :     * src/Makefile.win ($(SHLIB)): Modifications per Uwe Ligges.
82 :    
83 : bates 109 2004-04-19 Douglas Bates <bates@stat.wisc.edu>
84 :    
85 :     * src/ssclme.c (ssclme_update_mm): fix logic error in
86 :     ssclme_update_mm
87 :    
88 : bates 105 2004-04-18 Douglas Bates <bates@stat.wisc.edu>
89 :    
90 :     * src/ssclme.c (ssclme_coef, ssclme_coefGets): Create consistency
91 :     in the order of unconstrained and constrained parameters.
92 :     (ssclme_gradient): Added the gradients (not yet correct for
93 :     multidimensional, unconstrained case).
94 :    
95 : bates 78 2004-04-14 Douglas Bates <bates@stat.wisc.edu>
96 :    
97 :     * src/ssclme.c (ssclme_EMsteps): Fix logic in REML update
98 :    
99 :     * src/Makefile.win: Remove unneeded ranlib call
100 :    
101 : bates 71 2004-04-12 Douglas Bates <bates@stat.wisc.edu>
102 :    
103 :     * DESCRIPTION (Version): New release
104 :    
105 :     * src/Makefile.win: Update Makefile.win to umfpack removal.
106 :    
107 : bates 49 2004-04-05 Douglas Bates <bates@bates2_home>
108 :    
109 :     * src/triplet_to_col.c: Create triplet_to_col as a native
110 :     function, not the version from umfpack. There were problems with
111 :     the configuration of UMFPACK for 64-bit processors and there was
112 :     only one umfpack routine being used so I moved it here.
113 :    
114 : bates 45 2004-04-04 Douglas Bates <bates@bates2_home>
115 :    
116 :     * src/ssclme.c (ssclme_variances): New function.
117 :    
118 : bates 28 2004-03-28 Douglas Bates <bates@bates2_home>
119 :    
120 :     * src/ssclme.c (ssclme_fitted): Added function.
121 :    
122 : bates 22 2004-03-27 Douglas Bates <bates@bates2_home>
123 :    
124 :     * src/ssclme.c (ssclme_transfer_dimnames): Add new function to
125 :     store the dimnames in the XtX and bVar slots
126 :     (ssclme_update_mm): Change the dimensions of the bVar slot
127 :     components and the returned value from ssclme_ranef.
128 :    
129 : bates 10 2004-03-18 Douglas Bates <bates@stat.wisc.edu>
130 :    
131 :     * R/{pdMat.R,pdIdent.R,pdLogChol.R,pdMatrixLog.R,pdNatural.R},
132 :     src/{pdMat.c,pdIdent.c,pdLogChol.c,pdNatural.c},
133 :     tests/{pdCompSymm.R,pdDiag.R,pdIdent.R,pdLogChol.R,pdNatural.R},
134 :     man/{pdMat-class.Rd,pdmatrix-class.Rd,corrmatrix-class.Rd,
135 :     pdDiag-class.Rd,pdIdent-class.Rd,pdNatural-class.Rd,
136 :     pdLogChol-class.Rd,coefGets.Rd,pdCompSymm-class.Rd,
137 :     pdfactor-class.Rd,pdFactor.Rd,pdMatrix.Rd,
138 :     pdBlocked-class.Rd},AllClass.R,AllGeneric.R:
139 :     Moved the pdMat classes from the lme4 package.
140 :    
141 :     2004-03-02 Douglas Bates <bates@stat.wisc.edu>
142 :    
143 :     * man/ssclme-class.Rd: Update definition and documentation of the
144 :     ssclme class to include the DIsqrt slot.
145 :    
146 :     * src/ssclme.c (ssclme_deviance): Modify order of computation
147 :     (much faster using dsyrk, a level 3 BLAS routine).
148 :    
149 :     * src/Makefile (SUBLIBS): Change definition (K. Hornik)
150 :    
151 :     2004-02-28 Douglas Bates <bates@stat.wisc.edu>
152 :    
153 :     * tests/ssclme.R: Modify the test to account for the permutation
154 :     of the levels of the grouping factors.
155 :    
156 :     2004-02-23 Douglas Bates <bates@stat.wisc.edu>
157 :    
158 :     * R/ssclme.R,src/ssclme.c (ssclme): Move slots of sscCrosstab slot
159 :     directly into the ssclme class definition.
160 :    
161 :     2004-02-22 Douglas Bates <bates@stat.wisc.edu>
162 :    
163 :     * DESCRIPTION (Date): New release
164 :    
165 :     * man/ssclme-class.Rd: new file.
166 :    
167 :     * src/ssclme.c (ssclme_loglik): major revisions in design. It
168 :     works and it's fast!
169 :    
170 :     2004-02-17 Douglas Bates <bates@stat.wisc.edu>
171 :    
172 :     * src/taucs/Makefile.win (lib): Change "ar" to "$(AR)" (B.Ripley)
173 :    
174 :     2004-02-16 Douglas Bates <bates@stat.wisc.edu>
175 :    
176 :     * DESCRIPTION (Date): New release
177 :    
178 :     * NAMESPACE: Don't export ssclme.
179 :    
180 :     * data/ScotsSec.rda, man/ScotsSec.Rd: Add Scottish secondary
181 :     school data.
182 :    
183 :     2004-02-11 Douglas Bates <bates@stat.wisc.edu>
184 :    
185 :     * src/sscCrosstab.c (sscCrosstab): Added a row to the incidence to
186 :     keep track of the fixed-effects and the response. Counts also
187 :     gets an extra element, which is always one.
188 :    
189 :     * src/ldl.c: Include these routines from Tim Davis' LDL package.
190 :    
191 :     2004-02-10 Douglas Bates <bates@stat.wisc.edu>
192 :    
193 :     * src/cscMatrix.c (csc_transpose): new function
194 :    
195 :     * src/Mutils.c (csc_sort_columns): perm/iperm confusion corrected
196 :     (csc_components_transpose): new function
197 :    
198 :     2004-02-06 Douglas Bates <bates@stat.wisc.edu>
199 :    
200 :     * src/triplet.c (triplet_validate): Fix Dim slot on generated
201 :     triplets
202 :    
203 :     2004-01-30 Douglas Bates <bates@stat.wisc.edu>
204 :    
205 :     * R/sscCrosstab.R (sscCrosstab): Added sscCrosstab generator function.
206 :    
207 :     * src/LU.h (MATRIX_LU_H): Add #ifndef #define ... #endif to this
208 :     and all other .h files in src.
209 :    
210 :     * src/Makefile.win: This and other Makefile.win files contributed
211 :     by Brian Ripley.
212 :    
213 :     2004-01-27 Douglas Bates <bates@stat.wisc.edu>
214 :    
215 :     * R/syMatrix.R: Added methods for "%*%".
216 :    
217 :     * R/Hilbert.R (Hilbert): Changed Hilbert function to return a
218 :     poMatrix object.
219 :    
220 :     2004-01-26 Douglas Bates <bates@stat.wisc.edu>
221 :    
222 :     * man/sscChol-class.Rd,man/mm.Rd,man/y.Rd: Added man pages.
223 :    
224 :     2004-01-25 Douglas Bates <bates@bates2_home>
225 :    
226 :     * inst/doc/Introduction.Rnw,Comparisons.Rnw: Added vignettes.
227 :    
228 :     * R/csc.R: Convert all cscMatrix classes to use Dim slot instead
229 :     of nrow.
230 :    
231 :     2003-12-31 Douglas Bates <bates@stat.wisc.edu>
232 :    
233 :     * src/taucs/taucs.h: Moved taucs.h, amd.h, and umfpack.h into
234 :     subdirectories.
235 :    
236 :     2003-12-08 Douglas Bates <bates@stat.wisc.edu>
237 :    
238 :     * src/taucs.h: Accidently referred to global header files
239 :     instead of local files.
240 :    
241 :     2003-12-04 Douglas Bates <bates@stat.wisc.edu>
242 :    
243 :     * R/AllClass.R: Lots of changes. Removed all the lapack++ code
244 :     and methods and replaced all classes with S4 classes.
245 :    
246 :     2003-04-19 Douglas Bates <bates@stat.wisc.edu>
247 :    
248 :     * R/det.R,man/det.Rd: Change name of det generic to determinant
249 :    
250 :     * src/R_LapackPP.cc: Change method of calculating determinants
251 :    
252 :     2003-02-03 Douglas Bates <bates@stat.wisc.edu>
253 :    
254 :     * DESCRIPTION (Version): removed empty data directory as requested
255 :     by CRAN maintainers. Changed version number and date.
256 :    
257 :     2002-10-23 Douglas Bates <bates@stat.wisc.edu>
258 :    
259 :     * src/laindex.h: Applied patches from Brian Ripley for compilation
260 :     under Windows.
261 :    
262 :     * Added configure.win and src/Makevars.win as requested by Brian
263 :     Ripley.
264 :    
265 :     2002-05-03 Douglas Bates <bates@stat.wisc.edu>
266 :    
267 :     * src/lamatrix.h: Removing pre-1.2.0 compatibility code per Kurt
268 :     Hornik.
269 :    
270 :     2002-04-24 Douglas Bates <bates@stat.wisc.edu>
271 :    
272 :     * configure.ac: Replaced configure.in with configure.ac
273 :     contributed by Kurt Hornik.
274 :    
275 :     * aclocal.m4 (ac_clean_files): Replaced this with Kurt Hornik's
276 :     version for R-1.5.0
277 :    
278 :    
279 :     2001-12-10 Douglas Bates <bates@stat.wisc.edu>
280 :    
281 :     * man/eigen.Rd: Removed the .Alias in the example

root@r-forge.r-project.org
ViewVC Help
Powered by ViewVC 1.0.0  
Thanks to:
Vienna University of Economics and Business Powered By FusionForge