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[matrix] Annotation of /pkg/ChangeLog
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Annotation of /pkg/ChangeLog

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1 : bates 22 2004-03-27 Douglas Bates <bates@bates2_home>
2 :    
3 :     * src/ssclme.c (ssclme_transfer_dimnames): Add new function to
4 :     store the dimnames in the XtX and bVar slots
5 :     (ssclme_update_mm): Change the dimensions of the bVar slot
6 :     components and the returned value from ssclme_ranef.
7 :    
8 : bates 10 2004-03-18 Douglas Bates <bates@stat.wisc.edu>
9 :    
10 :     * R/{pdMat.R,pdIdent.R,pdLogChol.R,pdMatrixLog.R,pdNatural.R},
11 :     src/{pdMat.c,pdIdent.c,pdLogChol.c,pdNatural.c},
12 :     tests/{pdCompSymm.R,pdDiag.R,pdIdent.R,pdLogChol.R,pdNatural.R},
13 :     man/{pdMat-class.Rd,pdmatrix-class.Rd,corrmatrix-class.Rd,
14 :     pdDiag-class.Rd,pdIdent-class.Rd,pdNatural-class.Rd,
15 :     pdLogChol-class.Rd,coefGets.Rd,pdCompSymm-class.Rd,
16 :     pdfactor-class.Rd,pdFactor.Rd,pdMatrix.Rd,
17 :     pdBlocked-class.Rd},AllClass.R,AllGeneric.R:
18 :     Moved the pdMat classes from the lme4 package.
19 :    
20 :     2004-03-02 Douglas Bates <bates@stat.wisc.edu>
21 :    
22 :     * man/ssclme-class.Rd: Update definition and documentation of the
23 :     ssclme class to include the DIsqrt slot.
24 :    
25 :     * src/ssclme.c (ssclme_deviance): Modify order of computation
26 :     (much faster using dsyrk, a level 3 BLAS routine).
27 :    
28 :     * src/Makefile (SUBLIBS): Change definition (K. Hornik)
29 :    
30 :     2004-02-28 Douglas Bates <bates@stat.wisc.edu>
31 :    
32 :     * tests/ssclme.R: Modify the test to account for the permutation
33 :     of the levels of the grouping factors.
34 :    
35 :     2004-02-23 Douglas Bates <bates@stat.wisc.edu>
36 :    
37 :     * R/ssclme.R,src/ssclme.c (ssclme): Move slots of sscCrosstab slot
38 :     directly into the ssclme class definition.
39 :    
40 :     2004-02-22 Douglas Bates <bates@stat.wisc.edu>
41 :    
42 :     * DESCRIPTION (Date): New release
43 :    
44 :     * man/ssclme-class.Rd: new file.
45 :    
46 :     * src/ssclme.c (ssclme_loglik): major revisions in design. It
47 :     works and it's fast!
48 :    
49 :     2004-02-17 Douglas Bates <bates@stat.wisc.edu>
50 :    
51 :     * src/taucs/Makefile.win (lib): Change "ar" to "$(AR)" (B.Ripley)
52 :    
53 :     2004-02-16 Douglas Bates <bates@stat.wisc.edu>
54 :    
55 :     * DESCRIPTION (Date): New release
56 :    
57 :     * NAMESPACE: Don't export ssclme.
58 :    
59 :     * data/ScotsSec.rda, man/ScotsSec.Rd: Add Scottish secondary
60 :     school data.
61 :    
62 :     2004-02-11 Douglas Bates <bates@stat.wisc.edu>
63 :    
64 :     * src/sscCrosstab.c (sscCrosstab): Added a row to the incidence to
65 :     keep track of the fixed-effects and the response. Counts also
66 :     gets an extra element, which is always one.
67 :    
68 :     * src/ldl.c: Include these routines from Tim Davis' LDL package.
69 :    
70 :     2004-02-10 Douglas Bates <bates@stat.wisc.edu>
71 :    
72 :     * src/cscMatrix.c (csc_transpose): new function
73 :    
74 :     * src/Mutils.c (csc_sort_columns): perm/iperm confusion corrected
75 :     (csc_components_transpose): new function
76 :    
77 :     2004-02-06 Douglas Bates <bates@stat.wisc.edu>
78 :    
79 :     * src/triplet.c (triplet_validate): Fix Dim slot on generated
80 :     triplets
81 :    
82 :     2004-01-30 Douglas Bates <bates@stat.wisc.edu>
83 :    
84 :     * R/sscCrosstab.R (sscCrosstab): Added sscCrosstab generator function.
85 :    
86 :     * src/LU.h (MATRIX_LU_H): Add #ifndef #define ... #endif to this
87 :     and all other .h files in src.
88 :    
89 :     * src/Makefile.win: This and other Makefile.win files contributed
90 :     by Brian Ripley.
91 :    
92 :     2004-01-27 Douglas Bates <bates@stat.wisc.edu>
93 :    
94 :     * R/syMatrix.R: Added methods for "%*%".
95 :    
96 :     * R/Hilbert.R (Hilbert): Changed Hilbert function to return a
97 :     poMatrix object.
98 :    
99 :     2004-01-26 Douglas Bates <bates@stat.wisc.edu>
100 :    
101 :     * man/sscChol-class.Rd,man/mm.Rd,man/y.Rd: Added man pages.
102 :    
103 :     2004-01-25 Douglas Bates <bates@bates2_home>
104 :    
105 :     * inst/doc/Introduction.Rnw,Comparisons.Rnw: Added vignettes.
106 :    
107 :     * R/csc.R: Convert all cscMatrix classes to use Dim slot instead
108 :     of nrow.
109 :    
110 :     2003-12-31 Douglas Bates <bates@stat.wisc.edu>
111 :    
112 :     * src/taucs/taucs.h: Moved taucs.h, amd.h, and umfpack.h into
113 :     subdirectories.
114 :    
115 :     2003-12-08 Douglas Bates <bates@stat.wisc.edu>
116 :    
117 :     * src/taucs.h: Accidently referred to global header files
118 :     instead of local files.
119 :    
120 :     2003-12-04 Douglas Bates <bates@stat.wisc.edu>
121 :    
122 :     * R/AllClass.R: Lots of changes. Removed all the lapack++ code
123 :     and methods and replaced all classes with S4 classes.
124 :    
125 :     2003-04-19 Douglas Bates <bates@stat.wisc.edu>
126 :    
127 :     * R/det.R,man/det.Rd: Change name of det generic to determinant
128 :    
129 :     * src/R_LapackPP.cc: Change method of calculating determinants
130 :    
131 :     2003-02-03 Douglas Bates <bates@stat.wisc.edu>
132 :    
133 :     * DESCRIPTION (Version): removed empty data directory as requested
134 :     by CRAN maintainers. Changed version number and date.
135 :    
136 :     2002-10-23 Douglas Bates <bates@stat.wisc.edu>
137 :    
138 :     * src/laindex.h: Applied patches from Brian Ripley for compilation
139 :     under Windows.
140 :    
141 :     * Added configure.win and src/Makevars.win as requested by Brian
142 :     Ripley.
143 :    
144 :     2002-05-03 Douglas Bates <bates@stat.wisc.edu>
145 :    
146 :     * src/lamatrix.h: Removing pre-1.2.0 compatibility code per Kurt
147 :     Hornik.
148 :    
149 :     2002-04-24 Douglas Bates <bates@stat.wisc.edu>
150 :    
151 :     * configure.ac: Replaced configure.in with configure.ac
152 :     contributed by Kurt Hornik.
153 :    
154 :     * aclocal.m4 (ac_clean_files): Replaced this with Kurt Hornik's
155 :     version for R-1.5.0
156 :    
157 :    
158 :     2001-12-10 Douglas Bates <bates@stat.wisc.edu>
159 :    
160 :     * man/eigen.Rd: Removed the .Alias in the example

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