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RE: Error in pseudo absences selection with 'sre' with R version [ Reply ]
By: Dino Biancolini on 2022-10-26 09:11
[forum:49466]
Hello there, I have the same problem!

RE: Error in pseudo absences selection with 'sre' with R version [ Reply ]
By: Maya Guéguen on 2022-10-24 10:01
[forum:49459]
Hello Aurore,

biomod2 is now hosted and maintained on github : https://github.com/biomodhub/biomod2
In order to facilitate our job, we try to centralise all issues and questions here : https://github.com/biomodhub/biomod2/issues
Please, create a new issue so we can help you best, and it may potentially be of interest to other users.

Thanks in advance,
Maya

Error in pseudo absences selection with 'sre' with R version [ Reply ]
By: aurore receveur on 2022-10-21 09:28
[forum:49458]
Hi

I am trying to select pseudo absences with the 'sre' strategy.
My code completly works on R version 4.1.2, but does not work anymore on R version 4.2.1.

The error (that was not there before) is :
"Error in pa.data.tmp$xy[which((pa.data.tmp$sp != 1 | is.na(pa.data.tmp$sp)) & :
subscript out of bounds
In addition: Warning messages:
1: In pa.data.tmp$sp == 1 & as.data.frame(pa.data.tmp$pa.tab)[, pa] :
longer object length is not a multiple of shorter object length
2: In (pa.data.tmp$sp != 1 | is.na(pa.data.tmp$sp)) & as.data.frame(pa.data.tmp$pa.tab)[, :
longer object length is not a multiple of shorter object length"

I manage to select random pseudo absences on the same dataset with the R version 4.2.1.
It is the Biomod2 3.5.1 in both cases

do you have any idea of why ?

thank you for your help

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