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| JUICE+R ordination in JUICE updated in 2017, the online information also updated [ Reply ] By: David Zeleny on 2020-02-22 06:49 | [forum:47422] |
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I just updated the online information about the JUICE+R ordinations. The ordijuice packages has been updated by Markus Neupert, who has been visiting Brno working group two years ago (report about his work on ordijuice is here: http://www.sci.muni.cz/botany/juice/Rapport%20de%20stage.pdf). It enables the package work also on the latest R versions, but on the other side, it cannot be used with old R version. Please, install the latest R version on your computer, and follow the instructions from the website. If it's not working, let me know - best if you describe 1) version of JUICE you are using, 2) version of R you are using, and also append the "juice2.out" file, which is located in the R directory (typically "c:\Program Files\R\R-x.x.x\bin\x64\", where "x.x.x" is the version of R associated with your JUICE. In some cases, the "ordijuice" library needs to be manually compiled from GitHub repository of Markus here: devtools::install_github('MarkusN-fr/ordijuice2017') You can use the latest version of R for this (I tested it on 3.６.２); you need to have devtools library installed in your R. !!!NOTE: currently (2020/2/22), the JUICE new 7.1 version does not support ordinations in R (there is a bug). I will let Lubomir Tichy konw that. Until then, please use 7.0 JUICE version. |
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