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MmgraphR log file (check_x86_64_linux)

Thu Aug 18 15:12:22 2016: Checking package MmgraphR (SVN revision 717) ...
* using log directory ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/MmgraphR.Rcheck’
* using R version 3.3.1 Patched (2016-08-17 r71112)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘MmgraphR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MmgraphR’ version ‘0.1’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Pauline (Poulcheria) Adamopoulou ’

New submission

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MmgraphR’ can be installed ... [5s/6s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... WARNING
trmatplot:
  function(d, rowconstraint, seed, cspal, cpal, title, xlab, ylab,
           ylim, xtlab, ytlab, pfilter, shade.col, num, hide.col,
           lorder, plot, verbose, ...)
trmatplot.default:
  function(d, seed, rowconstraint, order, cspal, cpal, title, xlab,
           ylab, ylim, xtlab, ytlab, pfilter, shade.col, num, hide.col,
           lorder, plot, verbose, ...)

trmatplot:
  function(d, rowconstraint, seed, cspal, cpal, title, xlab, ylab,
           ylim, xtlab, ytlab, pfilter, shade.col, num, hide.col,
           lorder, plot, verbose, ...)
trmatplot.array:
  function(d, seed, rowconstraint, order, cspal, cpal, title, xlab,
           ylab, ylim, xtlab, ytlab, pfilter, shade.col, num, hide.col,
           lorder, plot, verbose, ...)

See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
march.Dcmm.trmatplot: warning in terrain_hcl(M, h = c(130, 0), c =
  c(100, 30), l = 50, power = c(1/M, 1)): partial argument match of 'c'
  to 'c.'
trmatplot.default: warning in terrain_hcl(M, h = c(130, 0), c = c(100,
  30), l = 50, power = c(1/M, 1)): partial argument match of 'c' to
  'c.'
march.Dcmm.trmatplot: no visible binding for global variable ‘filter’
traminer2march: no visible global function definition for
  ‘march.dataset.loadFromDataFrame’
trmat: no visible binding for global variable ‘fm’
trmat.depmix.fitted: no visible binding for global variable ‘fm’
trmatplot.default: no visible binding for global variable ‘filter’
Undefined global functions or variables:
  filter fm march.dataset.loadFromDataFrame
Consider adding
  importFrom("stats", "filter")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘HiddenMarkov’, ‘HMM’, ‘depmixS4’
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [4s/5s] OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/MmgraphR.Rcheck/00check.log’
for details.


Run time: 84.57 seconds.

Additional Logs:   00install.out
Thanks to:
Vienna University of Economics and Business University of Wisconsin - Madison Powered By FusionForge