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seqdist2 log file (build_win64)

Tue Jun 20 20:52:18 2017: Building binary for package seqdist2 (SVN revision 884)
using R version 3.3.3 (2017-03-06) ...

* installing to library 'R:/lib/local/3.3'
* installing *source* package 'seqdist2' ...
** libs

*** arch - i386
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c DHDdistance.cpp -o DHDdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c LCPdistance.cpp -o LCPdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSDURSoftdistance.cpp -o NMSDURSoftdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSMSTSoftdistance.cpp -o NMSMSTSoftdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSMSTSoftdistanceII.cpp -o NMSMSTSoftdistanceII.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSMSTdistance.cpp -o NMSMSTdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSdistance.cpp -o NMSdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMPerdistance.cpp -o OMPerdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMVI2distance.cpp -o OMVI2distance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMVIdistance.cpp -o OMVIdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMdistance.cpp -o OMdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMvdistance.cpp -o OMvdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c TWEDdistance.cpp -o TWEDdistance.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c chisq.cpp -o chisq.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c distancecalculator.cpp -o distancecalculator.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c distancefunctionsOO.cpp -o distancefunctionsOO.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c distanceobject.cpp -o distanceobject.o
c:/Rtools/mingw_32/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c traminerdebug.cpp -o traminerdebug.o
c:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o seqdist2.dll tmp.def DHDdistance.o LCPdistance.o NMSDURSoftdistance.o NMSMSTSoftdistance.o NMSMSTSoftdistanceII.o NMSMSTdistance.o NMSdistance.o OMPerdistance.o OMVI2distance.o OMVIdistance.o OMdistance.o OMvdistance.o TWEDdistance.o chisq.o distancecalculator.o distancefunctionsOO.o distanceobject.o traminerdebug.o -fopenmp -LR:/base/local215/lib/i386 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/i386 -lR
installing to R:/lib/local/3.3/seqdist2/libs/i386

*** arch - x64
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c DHDdistance.cpp -o DHDdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c LCPdistance.cpp -o LCPdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSDURSoftdistance.cpp -o NMSDURSoftdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSMSTSoftdistance.cpp -o NMSMSTSoftdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSMSTSoftdistanceII.cpp -o NMSMSTSoftdistanceII.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSMSTdistance.cpp -o NMSMSTdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c NMSdistance.cpp -o NMSdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMPerdistance.cpp -o OMPerdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMVI2distance.cpp -o OMVI2distance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMVIdistance.cpp -o OMVIdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMdistance.cpp -o OMdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c OMvdistance.cpp -o OMvdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c TWEDdistance.cpp -o TWEDdistance.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c chisq.cpp -o chisq.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c distancecalculator.cpp -o distancecalculator.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c distancefunctionsOO.cpp -o distancefunctionsOO.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c distanceobject.cpp -o distanceobject.o
c:/Rtools/mingw_64/bin/g++  -I"R:/lib/R/R-patched/include" -DNDEBUG     -I"R:/base/local215/include"  -DTRAMINER_DEBUG -fopenmp   -O2 -Wall  -mtune=core2 -c traminerdebug.cpp -o traminerdebug.o
c:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o seqdist2.dll tmp.def DHDdistance.o LCPdistance.o NMSDURSoftdistance.o NMSMSTSoftdistance.o NMSMSTSoftdistanceII.o NMSMSTdistance.o NMSdistance.o OMPerdistance.o OMVI2distance.o OMVIdistance.o OMdistance.o OMvdistance.o TWEDdistance.o chisq.o distancecalculator.o distancefunctionsOO.o distanceobject.o traminerdebug.o -fopenmp -LR:/base/local215/lib/x64 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/x64 -lR
installing to R:/lib/local/3.3/seqdist2/libs/x64
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
*** arch - i386
*** arch - x64
* MD5 sums
packaged installation of 'seqdist2' as seqdist2_0.9-2.zip
* DONE (seqdist2)
Run time: 16.12 seconds.
Thanks to:
Vienna University of Economics and Business University of Wisconsin - Madison Powered By FusionForge